Directory dependency graph for matdes:
Files | |
| file | BuildingBlockInterfaceOperation.cc |
| file | BuildingBlockInterfaceOperation.fwd.hh |
| Restrict design to only residues at inter-building block interfaces. | |
| file | BuildingBlockInterfaceOperation.hh |
| Restrict design to only residues at inter-building block interfaces. | |
| file | BuildingBlockInterfaceOperationCreator.hh |
| file | ClashCheckFilter.cc |
| Checks to see if any residues defined by the TaskOperations have clashing CA/CBs between interfaces (building block aware). | |
| file | ClashCheckFilter.fwd.hh |
| file | ClashCheckFilter.hh |
| header file for ClashCheckFilter class | |
| file | ClashCheckFilterCreator.hh |
| FilterCreator for the ClashCheckFilter. | |
| file | ExtractSubposeMover.cc |
| Extract primary component associated with symdofs and all neighboring components. Note: Currently just dumps extracted PDB and does not modify pose. | |
| file | ExtractSubposeMover.fwd.hh |
| file | ExtractSubposeMover.hh |
| Extract primary component associated with symdofs and all neighboring components. | |
| file | ExtractSubposeMoverCreator.hh |
| file | GetRBDOFValues.cc |
| Returns the translation and angle for movable jump. | |
| file | GetRBDOFValues.fwd.hh |
| file | GetRBDOFValues.hh |
| header file for GetRBDOFValues class | |
| file | GetRBDOFValuesCreator.hh |
| FilterCreator for the GetRBDOFValues. | |
| file | InterfacePackingFilter.cc |
| file | InterfacePackingFilter.fwd.hh |
| forward declaration for InterfacePackingFilter | |
| file | InterfacePackingFilter.hh |
| Calculates the RosettaHoles score for the atoms within a user-defined cutoff distance (default = 9.0) of the subpose interface. Filters based on lower and upper thresholds, which are set to -/+5 by default. | |
| file | InterfacePackingFilterCreator.hh |
| FilterCreators for the InterfacePackingFilter. | |
| file | MatDesGreedyOptMutationMover.cc |
| file | MatDesGreedyOptMutationMover.fwd.hh |
| This is a modified version of Chris King's GreedyOptMutationMover with additional functionality that is currently not compatible with all of the ParetoOpt functionality. Please note that this has been checked into master in its current state in response to requests from others to use this modified version of Chris King's GreedyOptMutationMover. Although this is still a somewhat developmental piece of code, it has currently been left in src/protocols/matdes/ to avoid issues with intra-library level dependencies. | |
| file | MatDesGreedyOptMutationMover.hh |
| This is a modified version of Chris King's GreedyOptMutationMover with additional functionality that is currently not compatible with all of the ParetoOpt functionality. Please note that this has been checked into master in its current state in response to requests from others to use this modified version of Chris King's GreedyOptMutationMover. Although this is still a somewhat developmental piece of code, it has currently been left in src/protocols/matdes/ to avoid issues with intra-library level dependencies. | |
| file | MatDesGreedyOptMutationMoverCreator.hh |
| file | MatDesPointMutationCalculator.cc |
| file | MatDesPointMutationCalculator.fwd.hh |
| this is a modified version of chris king's PointMutationCalculator with additional functionality that is currently not compatible with all of the ParetoOpt functionality. please note that this has been checked into master in its current state in response to requests from others to use this modified version of chris king's GreedyOptMutationMover. although this is still a somewhat developmental piece of code, it has currently been left in src/protocols/matdes/ to avoid issues with intra-library level dependencies. | |
| file | MatDesPointMutationCalculator.hh |
| this is a modified version of chris king's PointMutationCalculator with additional functionality that is currently not compatible with all of the ParetoOpt functionality. please note that this has been checked into master in its current state in response to requests from others to use this modified version of chris king's GreedyOptMutationMover. although this is still a somewhat developmental piece of code, it has currently been left in src/protocols/matdes/ to avoid issues with intra-library level dependencies. | |
| file | MotifHitsRotamersOperation.cc |
| file | MotifHitsRotamersOperation.fwd.hh |
| file | MotifHitsRotamersOperation.hh |
| file | OligomericAverageDegreeFilter.cc |
| Calculates AverageDegree within the context of an unbound oligomer. | |
| file | OligomericAverageDegreeFilter.fwd.hh |
| file | OligomericAverageDegreeFilter.hh |
| header file for OligomericAverageDegreeFilter class | |
| file | OligomericAverageDegreeFilterCreator.hh |
| FilterCreator for the OligomericAverageDegreeFilter. | |
| file | SchemePlaceMotifsMover.cc |
| file | SchemePlaceMotifsMover.fwd.hh |
| file | SchemePlaceMotifsMover.hh |
| file | SchemePlaceMotifsMoverCreator.hh |
| file | SymDofMover.cc |
| file | SymDofMover.fwd.hh |
| file | SymDofMover.hh |
| file | SymDofMoverCreator.hh |
| file | SymDofMoverSampler.cc |
| file | SymDofMoverSampler.hh |
| file | SymUnsatHbondFilter.cc |
| Determine the number of unsatified hydrogen bonds at an interface Works with both symmetric and asymmetric poses. | |
| file | SymUnsatHbondFilter.fwd.hh |
| file | SymUnsatHbondFilter.hh |
| definition of filter class SymUnsatHbondFilter. | |
| file | SymUnsatHbondFilterCreator.hh |
| FilterCreators for the SymUnsatHbondFilterCreator. | |
