Rosetta
esm_perplexity Directory Reference
Directory dependency graph for esm_perplexity:
src/protocols/esm_perplexity

Files

file  EsmPerplexityTensorflowProtocol.cc
 A class for predicting amino acid probabilities P(Sequence|Sequence) using the ESM language model.
 
file  EsmPerplexityTensorflowProtocol.fwd.hh
 
file  EsmPerplexityTensorflowProtocol.hh
 A class for predicting probabilities of amino acids P(Sequence|Sequence) using the ESM language model.
 
file  PerResidueEsmProbabilitiesMetric.cc
 A class for predicting amino acid probabilities P(Sequence|Sequence) using the ESM language model.
 
file  PerResidueEsmProbabilitiesMetric.fwd.hh
 A class for predicting amino acid probabilities P(Sequence|Sequence) using the ESM language model.
 
file  PerResidueEsmProbabilitiesMetric.hh
 A class for predicting amino acid probabilities P(Sequence|Sequence) using the ESM language model.
 
file  PerResidueEsmProbabilitiesMetricCreator.hh
 Predicting amino acid probabilities using the ESM language model.
 
file  PseudoPerplexityMetric.cc
 A class for calculating the pseudo-perplexity from a given PerResidueProbabilitiesMetric.
 
file  PseudoPerplexityMetric.fwd.hh
 A class for calculating the pseudo-perplexity from a given PerResidueProbabilitiesMetric.
 
file  PseudoPerplexityMetric.hh
 A class for calculating the pseudo-perplexity from a given PerResidueProbabilitiesMetric.
 
file  PseudoPerplexityMetricCreator.hh
 A class for calculating the pseudo-perplexity from a given PerResidueProbabilitiesMetric.