 |
Rosetta
2019.12
|
- c -
- c_str()
: fmt::BasicCStringRef< Char >
, fmt::BasicWriter< Char >
, fmt::FormatInt
, ObjexxFCL::Fstring
- Cache()
: Cache
- CacheableString()
: basic::datacache::CacheableString
- CacheableStringFloatMap()
: basic::datacache::CacheableStringFloatMap
- CacheableStringIntegerMap()
: basic::datacache::CacheableStringIntegerMap
- CacheableStringMap()
: basic::datacache::CacheableStringMap
- CacheableUint64MathMatrixFloatMap()
: basic::datacache::CacheableUint64MathMatrixFloatMap
- calc_bb_E()
: HDdesignMover
- calc_coordinate_rmsd()
: numeric::alignment::QCPKernel< Real >
- calc_coordinate_superposition()
: numeric::alignment::QCPKernel< Real >
- calc_rmsd_Theobald_method()
: numeric::alignment::QCPKernel< Real >
- calc_rmsds()
: RNA_DeNovoJobQueen
- calculate()
: HPatchByChainNPDCalculator
, HPatchNPDCalculator
, NBuriedUnsatsCalcultor
- calculate_auc()
: numeric::RocCurve
- calculate_rho()
: Solver
, Solver_NU
- calculate_tracer_level()
: basic::TracerImpl
- calculate_visibility()
: basic::TracerImpl
, basic::TracerImpl::TracerProxyImpl
- Calculator()
: numeric::Calculator
- calculator_name()
: HPatchByChainNPDCalculatorCreator
, HPatchNPDCalculatorCreator
, NBuriedUnsatsCalcultorCreator
- CalculatorParser()
: numeric::CalculatorParser
- can_hold_another()
: utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VectorOption_T_< K, T >
- can_load()
: pyrosetta.protocols.h5_structure_store_provider.H5StructureStoreProvider
- can_write()
: pyrosetta.protocols.h5_structure_store_provider.H5StructureStoreProvider
- Canonicalize()
: basic::sampling::orientations::Quaternion
- capacity()
: fmt::Buffer< T >
, numeric::random::WeightedReservoirSampler< T >
, ObjexxFCL::Chunk< T >
, utility::heap
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- CArray()
: ObjexxFCL::CArray< typename >
- CArrayP()
: ObjexxFCL::CArrayP< typename >
- cast()
: fmt::internal::BasicCharTraits< Char >
- category_map()
: basic::datacache::DataMap
- CaToAllAtom()
: CaToAllAtom
- CAtrace()
: CAtrace
- center()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- centered()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- cfg_nd()
: numeric::fourier::kiss_fftndr_state
- cfg_r()
: numeric::fourier::kiss_fftndr_state
- channel()
: basic::Tracer
, basic::TracerImpl
- channel_color()
: basic::TracerImpl
- channel_name_color()
: basic::TracerImpl
- char_msg()
: utility::SimulateMPIMessage
- char_of()
: ObjexxFCL::Fstring
- check_crc()
: utility::io::izstream
, zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- check_data_size()
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- check_for_hbonds()
: BacksideHbondFinderMover
- check_header()
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- check_invariants()
: numeric::Polynomial_1d
- check_key()
: utility::options::OptionCollection
- check_no_auto_index()
: fmt::internal::FormatterBase
- check_restricted_access()
: utility::options::Option
- check_specs()
: utility::options::OptionCollection
- check_table_and_perform_write()
: basic::database::schema_generator::Schema
- check_type()
: utility::json_spirit::Value_impl< Config >
- check_values()
: utility::options::OptionCollection
- child()
: numeric::expression_parser::ArithmeticASTFactor
- children_begin()
: numeric::expression_parser::ArithmeticASTAndClause
, numeric::expression_parser::ArithmeticASTExpression
, numeric::expression_parser::ArithmeticASTFunction
, numeric::expression_parser::ArithmeticASTOrClause
, numeric::expression_parser::ArithmeticASTRestAndClause
, numeric::expression_parser::ArithmeticASTRestExpression
, numeric::expression_parser::ArithmeticASTRestOrClause
, numeric::expression_parser::ArithmeticASTRestTerm
, numeric::expression_parser::ArithmeticASTTerm
- children_end()
: numeric::expression_parser::ArithmeticASTAndClause
, numeric::expression_parser::ArithmeticASTExpression
, numeric::expression_parser::ArithmeticASTFunction
, numeric::expression_parser::ArithmeticASTOrClause
, numeric::expression_parser::ArithmeticASTRestAndClause
, numeric::expression_parser::ArithmeticASTRestExpression
, numeric::expression_parser::ArithmeticASTRestOrClause
, numeric::expression_parser::ArithmeticASTRestTerm
, numeric::expression_parser::ArithmeticASTTerm
- Chunk()
: ObjexxFCL::Chunk< T >
- chunk_exponent()
: ObjexxFCL::ChunkVector< typename >
- chunk_size()
: ObjexxFCL::ChunkVector< typename >
- ChunkExponent()
: ObjexxFCL::ChunkExponent
- ChunkVector()
: ObjexxFCL::ChunkVector< typename >
- cl_value()
: utility::options::Option
, utility::options::ResidueChainVectorOption
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
- clash()
: numeric::geometry::hashing::MinimalClashHash
, numeric::geometry::hashing::xyzStripeHash
- clash_amount()
: numeric::geometry::hashing::xyzStripeHash
- clash_ball()
: numeric::geometry::hashing::MinimalClashHash
- clash_check_ball()
: numeric::geometry::hashing::xyzStripeHash
- clash_check_balls()
: numeric::geometry::hashing::MinimalClashHash
- clash_check_residue_pairs()
: numeric::geometry::hashing::xyzStripeHash
- clash_not_resid()
: numeric::geometry::hashing::xyzStripeHash
- clash_raw()
: numeric::geometry::hashing::xyzStripeHash
- clash_score()
: ScoreFragmentSetMover
- ClassBinder()
: binder::ClassBinder
- ClassKeyMap()
: utility::keys::ClassKeyMap< K, T, C >
- ClassKeyVector()
: utility::keys::ClassKeyVector< K, T, C >
- classname()
: basic::resource_manager::locator::DatabaseResourceLocator
, basic::resource_manager::locator::FileListResourceLocator
, basic::resource_manager::locator::FileSystemResourceLocator
, basic::resource_manager::locator::NullResourceLocator
- ClassVisitor()
: ClassVisitor
- cleaned()
: utility::options::OptionCollection
- clear()
: basic::datacache::DataCache< Data >
, basic::resource_manager::ResourceManager
- Clear()
: basic::sampling::orientations::QuatSet
- clear()
: binder::IncludeSet
, fmt::BasicWriter< Char >
, fmt::Buffer< T >
, numeric::IntervalSet< typename >
, numeric::random::WeightedSampler
, numeric::sphericalVector< typename >
- Clear()
: numeric::VoxelGrid< typename >
- clear()
: numeric::xyzMatrix< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::Dimension
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArrayInitializer< typename, class >
, ObjexxFCL::Fstring
, ObjexxFCL::IndexRange
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, ObjexxFCL::StaticIndexRange
, pyrosetta.bindings.pose.PoseScoreAccessor
, pyrosetta.bindings.pose.ResidueLabelAccessor
, utility::Bound< typename >
, utility::file::FileName
, utility::file::PathName
, utility::graph::ArrayPool< T >
, utility::in_place_list< T >
, utility::io::FileContentsMap
, utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::options::Option
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
, utility::recent_history_queue
, utility::signals::SignalHub< ResultType, Signal >
, utility::tag::Tag
- clear_buffer()
: utility::signals::BufferedSignalHub< ResultType, Signal >
- clear_input_files()
: utility::Inline_File_Provider
- clear_no_notify()
: ObjexxFCL::Dimension
, ObjexxFCL::DynamicIndexRange
- clear_processed_msgs()
: utility::SimulateMPIData
- clear_rms()
: numeric::model_quality::RmsData
- clear_tokens()
: utility::signals::TokenHub< ResultType, Signal >
- cloak_and_setup()
: HDdesignMover
- clone()
: apps::pilot::frankdt::segment_file_generator
, BacksideHbondFinderMover
, basic::datacache::CacheableData
, basic::datacache::CacheableString
, basic::datacache::CacheableStringFloatMap
, basic::datacache::CacheableStringIntegerMap
, basic::datacache::CacheableStringMap
, basic::datacache::CacheableUint64MathMatrixFloatMap
, basic::datacache::DiagnosticData
, basic::datacache::WriteableCacheableMap
, basic::MetricValue< T >
, basic::MetricValueBase
, DockGlycansProtocol
, ExemplarMover
, ExposedStrandMover
, HDdesignMover
, HDmakerMover
, LigandDockBench
, MetalSiteFinderMover
, Minimize
, MyScoreMover
, NCMinimize
- Clone()
: numeric::interpolation::spline::BicubicSpline
- clone()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CompoundInterpolator
, numeric::interpolation::spline::CubicSpline
, numeric::interpolation::spline::Interpolator
, numeric::interpolation::spline::PolycubicSpline< N >
, numeric::interpolation::spline::PolycubicSpline< 1 >
, numeric::interpolation::spline::PolycubicSpline< 2 >
, numeric::interpolation::spline::PolycubicSplineBase
, numeric::interpolation::spline::SimpleInterpolator
- Clone()
: numeric::interpolation::spline::TricubicSpline
, numeric::MathMatrix< T >
- clone()
: numeric::MathNTensor< T, N >
, numeric::MathNTensorBase< T >
, numeric::MathVector< T >
, ObjexxFCL::Dimension
, ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
, test.T850_SubClassing.MyNewCI1B
- Clone()
: utility::graph::RingDetection< Graph >
- clone()
: utility::io::GeneralFileContents
, utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
, utility::options::AnyOption< T >
, utility::options::AnyOptionKey
, utility::options::AnyVectorOption< T >
, utility::options::AnyVectorOptionKey
, utility::options::BooleanOption
, utility::options::BooleanOptionKey
, utility::options::BooleanVectorOption
, utility::options::BooleanVectorOptionKey
, utility::options::FileOption
, utility::options::FileOptionKey
, utility::options::FileVectorOption
, utility::options::FileVectorOptionKey
, utility::options::IntegerOption
, utility::options::IntegerOptionKey
, utility::options::IntegerVectorOption
, utility::options::IntegerVectorOptionKey
, utility::options::Option
, utility::options::OptionKey
, utility::options::PathOption
, utility::options::PathOptionKey
, utility::options::PathVectorOption
, utility::options::PathVectorOptionKey
, utility::options::RealOption
, utility::options::RealOptionKey
, utility::options::RealVectorOption
, utility::options::RealVectorOptionKey
, utility::options::ResidueChainVectorOption
, utility::options::ResidueChainVectorOptionKey
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::ScalarOptionKey
, utility::options::StringOption
, utility::options::StringOptionKey
, utility::options::StringVectorOption
, utility::options::StringVectorOptionKey
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
, utility::options::VectorOptionKey
, utility::tag::Tag
- closability_score()
: ScoreFragmentSetMover
- close()
: fmt::BufferedFile
, fmt::File
, options.KeepSameFile
, utility::io::izstream
, utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
, utility::io::ozstream
- closest_match()
: numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real >
- closest_match_subset()
: numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real >
- cluster()
: numeric::AgglomerativeHierarchicalClusterer
- cluster_frags()
: DockFragmentsMover
- ClusteringTreeNode()
: numeric::ClusteringTreeNode
- ClusterOptions()
: numeric::ClusterOptions
- code()
: binder::Binder
, utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
, utility::keys::VariantKey< K >
, utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
- coefficients()
: numeric::Polynomial_1d
- coefLoc()
: numeric::fourier::SO3coeffs
- col()
: numeric::xyzMatrix< typename >
- col_x()
: numeric::xyzMatrix< typename >
- col_y()
: numeric::xyzMatrix< typename >
- col_z()
: numeric::xyzMatrix< typename >
- collapse()
: numeric::MultiDimensionalHistogram
- ColPointers()
: numeric::ColPointers< T >
- cols()
: numeric::xyzMatrix< typename >
- cols_constructor()
: numeric::xyzMatrix< typename >
- ColsPointer()
: numeric::ColsPointer< T >
- Column()
: basic::database::schema_generator::Column
- columns()
: basic::database::schema_generator::ForeignKey
, basic::database::schema_generator::Index
, basic::database::schema_generator::PrimaryKey
- ColVectors()
: numeric::ColVectors< T >
- CombinePaths()
: utility::graph::RingDetection< Graph >
- commit_transaction()
: utility::sql_database::session
- common_type()
: utility::tag::XMLSchemaType
- comparable()
: utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
- comparator()
: numeric::AgglomerativeHierarchicalClusterer
, numeric::AverageLinkClusterer
, numeric::CompleteLinkClusterer
, numeric::SingleLinkClusterer
- compare()
: fmt::BasicStringRef< Char >
, sidechain_cst_3.Residue
- CompareKDPoints()
: numeric::kdtree::CompareKDPoints
- ComparingTracer()
: basic::ComparingTracer
- complete_larval_job_maturation()
: RNA_DeNovoJobQueen
, StepWiseJobQueen
- complex_type_name_for_loader()
: basic::resource_manager::ResourceLoaderFactory
- complex_type_name_for_locator()
: basic::resource_manager::ResourceLocatorFactory
- complex_type_name_for_resource_def()
: basic::resource_manager::ResourceManager
- complex_type_naming_func()
: utility::tag::XMLSchemaComplexTypeGenerator
, utility::tag::XMLSchemaComplexTypeGeneratorImpl
, utility::tag::XMLSchemaSimpleSubelementList
- complex_typename_for_element()
: utility::tag::XMLSchemaSimpleSubelementList
- CompoundInterpolator()
: numeric::interpolation::spline::CompoundInterpolator
- compress()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- compressed()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
- compute()
: numeric::Calculator
, numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
- compute_in_place()
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
- compute_lb_function_solution()
: numeric::interpolation::spline::Interpolator
- compute_ub_function_solution()
: numeric::interpolation::spline::Interpolator
- computed_last_chunk_size()
: ObjexxFCL::ChunkVector< typename >
- computed_n_chunk()
: ObjexxFCL::ChunkVector< typename >
- condition()
: numeric::expression_parser::ITEExpression
- Config()
: binder::Config
- conjugate()
: numeric::Quaternion< typename >
- conjugated()
: numeric::Quaternion< typename >
- connect()
: utility::signals::SignalHub< ResultType, Signal >
- connect_tokenize()
: utility::signals::TokenHub< ResultType, Signal >
- consider_sample()
: numeric::random::WeightedReservoirSampler< T >
- const_begin()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
- const_edge()
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
- const_edge_list_begin()
: utility::graph::Digraph
, utility::graph::DirectedNode
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
- const_edge_list_end()
: utility::graph::Digraph
, utility::graph::DirectedNode
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
- const_end()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
- const_incoming_edge_list_begin()
: utility::graph::DirectedNode
- const_incoming_edge_list_end()
: utility::graph::DirectedNode
- const_iterator()
: numeric::geometry::hashing::xyzStripeHash::const_iterator
- const_last()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
- const_location()
: numeric::kdtree::KDPoint
- const_lower_edge_list_begin()
: utility::graph::Node
- const_lower_edge_list_end()
: utility::graph::Node
- const_next()
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
- const_outgoing_edge_list_begin()
: utility::graph::DirectedNode
- const_outgoing_edge_list_end()
: utility::graph::DirectedNode
- const_previous()
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
- const_upper_edge_list_begin()
: utility::graph::Node
, utility::graph::UEVertex< V, E >
- const_upper_edge_list_end()
: utility::graph::Node
, utility::graph::UEVertex< V, E >
- constant()
: ObjexxFCL::Dimension
, ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
- ConstDataMap()
: basic::datacache::ConstDataMap
- Constraint()
: basic::database::schema_generator::Constraint
- construct()
: boost::unordered_object_pool< T, UserAllocator >
- contain()
: ObjexxFCL::DynamicIndexRange
, ObjexxFCL::IndexRange
, ObjexxFCL::StaticIndexRange
- contain_nic()
: ObjexxFCL::DynamicIndexRange
- contains()
: numeric::geometry::BoundingBox< typename >
, numeric::geometry::hashing::SixDCoordinateBinner
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::IndexRange
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, utility::vectorL< SSize, T, A >
- contains_composite_elements()
: utility::json_spirit::Generator< Value_type, Ostream_type >
- continue_at_dimension()
: utility::FixedSizeLexicographicalIterator< S >
, utility::LexicographicalIterator
- contract()
: numeric::geometry::BoundingBox< typename >
- convert()
: fmt::internal::CharTraits< char >
, fmt::internal::CharTraits< wchar_t >
, utility::py::COP_to_Python_converter< T >
- CoordinateArray_RMSD_FlatLookup()
: numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >
- copy()
: ObjexxFCL::Fstring
- copy_array_contents()
: utility::graph::ArrayPoolElement< T >
- copy_connectivity()
: utility::graph::Digraph
, utility::graph::Graph
- copy_data()
: DockGlycansProtocol
- copy_from()
: utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Node
, utility::graph::UpperEdgeGraph< V, E >
, utility::options::Option
, utility::options::ResidueChainVectorOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VectorOption_T_< K, T >
- copy_leaf_ids()
: numeric::ClusteringTreeNode
- copy_member_ids()
: numeric::ClusteringTreeNode
- correct()
: numeric::DietNode< T >
, numeric::DiscreteIntervalEncodingTree< T >
- count()
: numeric::model_quality::RmsData
, pyrosetta.distributed.utility.log.ProgressLogger
- count_dynamic_memory()
: utility::graph::Digraph
, utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Graph
, utility::graph::LowMemEdge
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
- count_static_memory()
: utility::graph::Digraph
, utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Graph
, utility::graph::LowMemEdge
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
- Counter()
: numeric::geometry::hashing::Counter
- counts()
: numeric::MultiDimensionalHistogram
- coval()
: utility::heap
- coval_for_val()
: utility::heap
- create()
: utility::factory::Factory< typename >
, utility::tag::Tag
- create_all_nested_namespaces()
: binder::Context
- create_data()
: basic::datacache::WriteableCacheableDataCreator
- create_energy_method()
: test.T850_SubClassing.MyNewCI1B_Creator
- create_expression_tree()
: numeric::expression_parser::ExpressionCreator
- create_impl()
: basic::MemTracer
, basic::Tracer
- create_instance()
: utility::io::GeneralFileManager
- create_new_block()
: utility::graph::ArrayPool< T >
- create_new_edge()
: utility::graph::Digraph
, utility::graph::Graph
- create_new_node()
: utility::graph::Digraph
, utility::graph::Graph
- create_residue_from_olc()
: MPDomainAssembly
- create_residue_from_resn()
: MPDomainAssembly
- create_resource()
: basic::database::DatabaseSessionLoader
, basic::resource_manager::ResourceLoader
, basic::resource_manager::ResourceManager
- create_resource_loader()
: basic::database::DatabaseSessionLoaderCreator
, basic::resource_manager::ResourceLoaderCreator
, basic::resource_manager::ResourceLoaderFactory
- create_resource_locator()
: basic::resource_manager::locator::DatabaseResourceLocatorCreator
, basic::resource_manager::locator::FileListResourceLocatorCreator
, basic::resource_manager::locator::FileSystemResourceLocatorCreator
, basic::resource_manager::locator::NullResourceLocatorCreator
, basic::resource_manager::ResourceLocatorCreator
, basic::resource_manager::ResourceLocatorFactory
, basic::resource_manager::ResourceManager
- create_resource_manager()
: basic::resource_manager::ResourceManagerCreator
- create_resource_manager_from_options_system()
: basic::resource_manager::ResourceManagerFactory
- create_subelement()
: utility::tag::XMLSchemaComplexTypeGeneratorImpl
- create_vertices()
: utility::graph::UpperEdgeGraph< V, E >
- CreateASTConsumer()
: BinderFrontendAction
- creators()
: utility::factory::WidgetFactory< Creator >
- cross()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- cross_product()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- CSI_Sequence()
: utility::CSI_Sequence
- Cstring()
: ObjexxFCL::Cstring
- CubicPolynomial()
: numeric::CubicPolynomial
- CubicSpline()
: numeric::interpolation::spline::CubicSpline
- curr_num_in_recent_history()
: utility::recent_history_queue
- current_callback_object()
: utility::py::PyExitCallback
- current_links()
: utility::signals::SignalHub< ResultType, Signal >
- custom_type_name()
: utility::tag::XMLSchemaType
- cut_from_map()
: DockFragmentsMover