  | 
  
    Rosetta
    2019.12
    
   | 
 
 
 
  
  
  
  
 
 
- p -
- p
: Solver
, svm_parameter
 
- P0
: numeric::xyzTransform< typename >::Line
 
- p1
: numeric::fourier::SHT
 
- P1
: numeric::xyzTransform< typename >::Line
 
- p_
: numeric::ColsPointer< T >
, numeric::geometry::hashing::xyzStripeHash::iter_base< C >
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >::iter_base< C >
, numeric::RowsPointer< T >
 
- pack_mover
: DesignBenchmark
 
- packer_
: DockGlycansProtocol
 
- packer_neighbor_graph_
: InteractionGraphPerformanceBenchmark
 
- pair_
: utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
 
- pair_scorefxn_
: zinc1_homodimer_design
 
- param
: svm_model
 
- parent
: numeric::DietNode< T >::split_tuple
, utility::graph::DS_Node
 
- parent_
: basic::datacache::HierarchicalDataMap
, numeric::ClusteringTreeNode
, numeric::kdtree::KDNode
, utility::tag::XMLSchemaRepeatableCTNode
 
- parentTag_
: utility::tag::Tag
 
- parser_
: numeric::CalculatorParser
 
- particles_
: utility::tag::XMLSchemaModelGroup
 
- patch
: pyrosetta.distributed.tasks.score.ScorePoseTask
 
- path
: arls_impl.DockingFile
 
- path_
: utility::file::FileName
, utility::file::PathName
 
- path_vectors_
: utility::options::OptionCollection
 
- pathmap_
: utility::graph::RingEdgeAnnotationVisitor< Graph, EdgeMap, PathMap >
 
- paths_
: utility::graph::RingDetection< Graph >
, utility::options::OptionCollection
 
- pausing_
: utility::signals::PausableSignalHub< ResultType, Signal >
 
- pdb_chain_
: HDmakerMover
 
- pdb_chain_no_
: PhProtocol
 
- pdb_file_name_
: PhProtocol
 
- pdb_info
: pyrosetta.bindings.pose.ResidueLabelAccessor
 
- pdb_name
: pyrosetta.toolbox.py_jobdistributor.PyJobDistributor
 
- pdb_res_nos_
: PhProtocol
 
- pdb_string_
: PDB_IOBenchmark
, ResidueTypeBenchmark
 
- pdbname_
: zinc1_homodimer_design
 
- pdbname_base_
: zinc1_homodimer_design
, zinc2_homodimer_design
 
- pep_pos
: pep_coord_cst
 
- per_class_includes_
: binder::Config
 
- periodic_
: numeric::interpolation::Histogram< typename, typename >
, numeric::interpolation::InterpolatedPotential< N >
 
- perturber_
: DockGlycansProtocol
 
- pH_neighbor_pack_
: PhProtocol
 
- pH_prepack_
: PhProtocol
 
- pH_relax_
: PhProtocol
 
- phi_
: numeric::sphericalVector< typename >
 
- phibin_
: ScoreFragInfo
 
- pickled_pose
: pyrosetta.distributed.packed_pose.core.PackedPose
 
- pimpl_
: utility::tag::XMLSchemaComplexTypeGenerator
, utility::tag::XMLValidator
 
- pka_all_
: PhProtocol
 
- pka_rad_
: PhProtocol
 
- pka_value_
: PhProtocol
 
- pointer
: fmt::internal::Value
 
- points_
: numeric::interpolation::spline::SplineGenerator
 
- polynomial_name_
: numeric::Polynomial_1d
 
- pos2frags
: FragmentAssemblyMover
 
- pos_
: FragID
 
- pos_in_nodes_edge_list_
: utility::graph::DirectedEdge
, utility::graph::Edge
 
- pos_in_owners_edge_list_
: utility::graph::DirectedEdge
, utility::graph::Edge
 
- pose
: PDB_IOBenchmark
, pyrosetta.bindings.pose.PoseResidueAccessor
, pyrosetta.bindings.pose.PoseResidueLabelAccessor
, pyrosetta.bindings.pose.PoseScoreAccessor
, ScoreBenchmark
, ShearMoverBenchmark
, SmallMoverBenchmark
 
- pose_
: FastRelaxPerformanceBenchmark
, FragInfo
, InteractionGraphPerformanceBenchmark
, NBuriedUnsatsCalcultor
, ScoreEachBenchmark
, sidechain_cst_3.Residue
 
- poses_
: MPDomainAssembly
 
- position_
: utility::fixedsizearray0const_iterator< T, S >
, utility::fixedsizearray0iterator< T, S >
, utility::fixedsizearray1const_iterator< T, S >
, utility::fixedsizearray1iterator< T, S >
 
- posn_begin_
: utility::json_spirit::Stream_reader_thrower< Istream_type, Value_type >
 
- posn_end_
: utility::json_spirit::Stream_reader_thrower< Istream_type, Value_type >
 
- POWERS_OF_10_32
: fmt::internal::BasicData< T >
 
- POWERS_OF_10_64
: fmt::internal::BasicData< T >
 
- pq_schema_
: utility::sql_database::session
 
- precision_
: fmt::FormatSpec
 
- precompute_pml_
: numeric::fourier::SHT
 
- precompute_pml_trans_
: numeric::fourier::SHT
 
- precompute_wig_trans_
: numeric::fourier::SHT
 
- prefix
: binder::Config
, pyrosetta.distributed.utility.log.ProgressLogger
 
- prefix_code_
: binder::ClassBinder
 
- prefix_includes
: binder::ClassBinder
 
- pretty_
: numeric::expression_parser::ASTPrinter
, utility::json_spirit::Generator< Value_type, Ostream_type >
 
- prev
: Cache::head_t
 
- prev_
: utility::list_element< T >
 
- previous_
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
 
- primary_key_
: basic::database::schema_generator::Schema
 
- print_channel_name
: basic::TracerOptions
 
- printflags
: numeric::nls::lm_control_struct
 
- priority_
: basic::Tracer
, basic::Tracer::TracerProxy
, basic::TracerImpl
, basic::TracerImpl::TracerProxyImpl
 
- probA
: svm_model
 
- probability
: svm_parameter
 
- probB
: svm_model
 
- processed_
: utility::SimulateMPIMessage
 
- protein
: arls_impl.DockingCase
 
- protein_pack_reps
: mutant_modeler.MutantModeler
 
- protocol_id_
: basic::mpi::DbMoverMessageListener
 
- protocol_lock
: pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask
, pyrosetta.distributed.tasks.score.ScorePoseTask
 
- protocol_xml
: pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask
 
- psformat64
: numeric::random::mt19937_RG
 
- psibin_
: ScoreFragInfo
 
- pt_
: numeric::kdtree::KDNode
 
- ptr_
: fmt::Buffer< T >
 
- px_
: numeric::HomogeneousTransform< T >
 
- py_
: numeric::HomogeneousTransform< T >
 
- pz_
: numeric::HomogeneousTransform< T >