PrepareGraphNodes.cc File Reference

#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/inout.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/database/sql_utils.hh>
#include <basic/database/schema_generator/Schema.hh>
#include <basic/database/schema_generator/PrimaryKey.hh>
#include <basic/database/schema_generator/ForeignKey.hh>
#include <basic/database/schema_generator/Column.hh>
#include <basic/Tracer.hh>
#include <utility/sql_database/DatabaseSessionManager.hh>
#include <utility/string_util.hh>
#include <devel/init.hh>
#include <core/types.hh>
#include <numeric/xyzVector.hh>
#include <numeric/model_quality/rms.hh>
#include <boost/uuid/uuid.hpp>
#include <boost/uuid/uuid_io.hpp>
#include <cstdio>

Functions
void	generate_schema (utility::sql_database::sessionOP db_session)
void	prepare_smotifs (utility::sql_database::sessionOP db_session)
void	prepare_helix_bundles (utility::sql_database::sessionOP db_session)
	prepare_beta_sandwiches (utility::sql_database::sessionOP db_session)
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("NodePairRmsdCalculator")

Function Documentation

generate_schema()

void generate_schema

(

utility::sql_database::sessionOP

db_session

)

References basic::database::schema_generator::Schema::add_column(), basic::database::schema_generator::Schema::add_foreign_key(), and basic::database::schema_generator::Schema::write().

Referenced by main().

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, generate_schema(), basic::database::get_db_session(), basic::init(), and prepare_smotifs().

prepare_beta_sandwiches()

prepare_beta_sandwiches

(

utility::sql_database::sessionOP

db_session

)

prepare_helix_bundles()

void prepare_helix_bundles

(

utility::sql_database::sessionOP

db_session

)

References basic::database::safely_prepare_statement(), basic::database::safely_read_from_database(), basic::database::safely_write_to_database(), numeric::interpolation::to_string(), and TR.

prepare_smotifs()

void prepare_smotifs

(

utility::sql_database::sessionOP

db_session

)

References basic::database::safely_prepare_statement(), basic::database::safely_read_from_database(), basic::database::safely_write_to_database(), and numeric::interpolation::to_string().

Referenced by main().

Variable Documentation

TR

basic::Tracer TR("NodePairRmsdCalculator") ( "NodePairRmsdCalculator"  )

static

Author

Tim Jacobs

Referenced by prepare_helix_bundles().