Rosetta
tjacobs Directory Reference
Directory dependency graph for tjacobs:
src/apps/pilot/tjacobs

Files

file  BundleDumper.cc
 
file  BundlePairRmsdCalculator.cc
 
file  BundlePairRmsdCalculatorGPU.cc
 
file  CompareBundleToNative.cc
 
file  FoldTreeOutputter.cc
 
file  FragmentDumper.cc
 
file  HelicalAssembly.cc
 
file  HelicalPdbGenerator.cc
 
file  HelixAssemblyDesigner.cc
 
file  InterfaceStrandFinderMover.cc
 
file  loophash_createfiltereddb.cc
 
file  model_dumper.cc
 
file  ModelTrimmer.cc
 Silly pilot app that reads a model file, removes models that fail certain criteria, and then dumps it back out. This is hardcoded in lots of terrible ways. Ideally, this concept should be generalized and run strategically during the actual generation of a SEWING construct, but that's for another day/PhD.
 
file  MotifFinder.cc
 
file  mpi_helixAssembly.cc
 
file  NodePairRmsdCalculator.cc
 
file  PrepareGraphNodes.cc
 
file  SewAppend.cc
 Application wrapper for the SEWING protocol. Takes a pre-generated score file and creates backbone assemblies from it.
 
file  SewingAssembler.cc
 
file  SmotifHasher.cc
 
file  SmotifPairRmsdCalculatorGPU.CC
 
file  TestLoophash.cc
 
file  ThreeHelixBundleFinder.cc