performance_benchmark.cc File Reference

#include <apps/benchmark/performance/performance_benchmark.hh>
#include <core/chemical/ChemicalManager.hh>
#include <devel/init.hh>
#include <core/types.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <numeric/random/random.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/exit.hh>
#include <cstdio>
#include <fstream>
#include <sys/time.h>
#include <sys/resource.h>
#include <apps/benchmark/performance/OptionCollection.bench.hh>
#include <apps/benchmark/performance/score.bench.hh>
#include <apps/benchmark/performance/SmallMover.bench.hh>
#include <apps/benchmark/performance/ShearMover.bench.hh>
#include <apps/benchmark/performance/Minimizer.bench.hh>
#include <apps/benchmark/performance/Docking.bench.hh>
#include <apps/benchmark/performance/pdb_io.bench.hh>
#include <apps/benchmark/performance/xml_parsing.bench.hh>
#include <apps/benchmark/performance/InstantiateModules.bench.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>

Functions
int	main (int argc, char *argv[])

Variables
const char	results_filename [] = "./../../../../_performance_"
const char	old_results_filename [] = "./../../../../_old_performance_"
OptionCollectionBenchmark	OptionCollection_ ("basic.options.OptionCollection")
ScoreBenchmark	Score_ ("core.scoring.Score")
SmallMoverBenchmark	SmallMover_ ("protocols.moves.SmallMover")
ShearMoverBenchmark	ShearMover_ ("protocols.moves.ShearMover")
MinimizerBenchmark_dfpmin	Minimizer_dfpmin_ ("protocols.optimization.Minimizer_dfpmin")
MinimizerBenchmark_dfpmin_armijo	MinimizerBenchmark_dfpmin_armijo_ ("protocols.optimization.Minimizer_dfpmin_armijo")
MinimizerBenchmark_dfpmin_armijo_nonmonotone	MinimizerBenchmark_dfpmin_armijo_nonmonotone_ ("protocols.optimization.Minimizer_dfpmin_armijo_nonmonotone")
DockingBenchmark_low	DockingLow ("protocols.docking.DockingLowRes")
DockingBenchmark_high	DockingHigh ("protocols.docking.DockingHighRes")
PDB_IOBenchmark	PDB_IO_ ("core.import_pose.pose_from_pdbstring")
XMLParseBenchmark	XMLParseBenchmark_ ("utility_tag_Tag_Create")
InstantiateModulesBenchmark	instantiate_modules_movers ("instantiate_modules_movers", ModuleType::MOVER)
InstantiateModulesBenchmark	instantiate_modules_filters ("instantiate_modules_filters", ModuleType::FILTER)
InstantiateModulesBenchmark	instantiate_modules_task_operations ("instantiate_modules_task_operations", ModuleType::TASK_OPERATION)
InstantiateModulesBenchmark	instantiate_modules_res_level_task_operations ("instantiate_modules_res_level_task_operations", ModuleType::RES_LEVEL_TASK_OPERATION)
InstantiateModulesBenchmark	instantiate_modules_residue_selectors ("instantiate_modules_residue_selectors", ModuleType::RESIDUE_SELECTOR)
InstantiateModulesBenchmark	instantiate_modules_simple_metrics ("instantiate_modules_simple_metrics", ModuleType::SIMPLE_METRIC)
InstantiateModulesBenchmark	instantiate_modules_packer_palettes ("instantiate_modules_packer_palettes", ModuleType::PACKER_PALETTE)
int	real_command_line_argc
char **	real_command_line_argv
int	command_line_argc
char **	command_line_argv

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References utility::options::OptionCollection::add_relevant(), argv, command_line_argc, command_line_argv, in::path::database(), test.T009_Exceptions::e, basic::Error(), PerformanceBenchmark::executeAllBenchmarks(), PerformanceBenchmark::executeOneBenchmark(), evaluate_beta_mutants::file, utility::file::file_exists(), basic::Tracer::flush(), PerformanceBenchmark::getOneReport(), PerformanceBenchmark::getReport(), create_a3b_hbs::i, basic::init(), name, NEW_OPT, old_results_filename, basic::options::option, erraser_single_res_analysis::out, real_command_line_argc, real_command_line_argv, basic::options::OptionKeys::ms::checkpoint::rename, report(), basic::options::OptionKeys::in::file::residue_type_set, results_filename, spectral_cluster_kmeans_adaptive_kernel_density_bb_dependent_rotlib::scale, TR, basic::options::OptionKeys::inout::dbms::user, and utility_exit.

Variable Documentation

command_line_argc

int command_line_argc

Referenced by core_init_with_additional_options(), and main().

command_line_argv

char** command_line_argv

Referenced by core_init_from_string(), core_init_with_additional_options(), and main().

DockingHigh

DockingBenchmark_high DockingHigh("protocols.docking.DockingHighRes")

(

"protocols.docking.DockingHighRes"

)

DockingLow

DockingBenchmark_low DockingLow("protocols.docking.DockingLowRes")

(

"protocols.docking.DockingLowRes"

)

instantiate_modules_filters

InstantiateModulesBenchmark instantiate_modules_filters("instantiate_modules_filters", ModuleType::FILTER)	(	"instantiate_modules_filters"	,
		ModuleType::FILTER
	)

instantiate_modules_movers

InstantiateModulesBenchmark instantiate_modules_movers("instantiate_modules_movers", ModuleType::MOVER)	(	"instantiate_modules_movers"	,
		ModuleType::MOVER
	)

instantiate_modules_packer_palettes

InstantiateModulesBenchmark instantiate_modules_packer_palettes("instantiate_modules_packer_palettes", ModuleType::PACKER_PALETTE)	(	"instantiate_modules_packer_palettes"	,
		ModuleType::PACKER_PALETTE
	)

instantiate_modules_res_level_task_operations

InstantiateModulesBenchmark instantiate_modules_res_level_task_operations("instantiate_modules_res_level_task_operations", ModuleType::RES_LEVEL_TASK_OPERATION)	(	"instantiate_modules_res_level_task_operations"	,
		ModuleType::RES_LEVEL_TASK_OPERATION
	)

instantiate_modules_residue_selectors

InstantiateModulesBenchmark instantiate_modules_residue_selectors("instantiate_modules_residue_selectors", ModuleType::RESIDUE_SELECTOR)	(	"instantiate_modules_residue_selectors"	,
		ModuleType::RESIDUE_SELECTOR
	)

instantiate_modules_simple_metrics

InstantiateModulesBenchmark instantiate_modules_simple_metrics("instantiate_modules_simple_metrics", ModuleType::SIMPLE_METRIC)	(	"instantiate_modules_simple_metrics"	,
		ModuleType::SIMPLE_METRIC
	)

instantiate_modules_task_operations

InstantiateModulesBenchmark instantiate_modules_task_operations("instantiate_modules_task_operations", ModuleType::TASK_OPERATION)	(	"instantiate_modules_task_operations"	,
		ModuleType::TASK_OPERATION
	)

Minimizer_dfpmin_

MinimizerBenchmark_dfpmin Minimizer_dfpmin_("protocols.optimization.Minimizer_dfpmin")

(

"protocols.optimization.Minimizer_dfpmin"

)

MinimizerBenchmark_dfpmin_armijo_

MinimizerBenchmark_dfpmin_armijo MinimizerBenchmark_dfpmin_armijo_("protocols.optimization.Minimizer_dfpmin_armijo")

(

"protocols.optimization.Minimizer_dfpmin_armijo"

)

MinimizerBenchmark_dfpmin_armijo_nonmonotone_

MinimizerBenchmark_dfpmin_armijo_nonmonotone MinimizerBenchmark_dfpmin_armijo_nonmonotone_("protocols.optimization.Minimizer_dfpmin_armijo_nonmonotone")

(

"protocols.optimization.Minimizer_dfpmin_armijo_nonmonotone"

)

old_results_filename

const char old_results_filename[] = "./../../../../_old_performance_"

Referenced by main().

OptionCollection_

OptionCollectionBenchmark OptionCollection_("basic.options.OptionCollection")

(

"basic.options.OptionCollection"

)

PDB_IO_

PDB_IOBenchmark PDB_IO_("core.import_pose.pose_from_pdbstring")

(

"core.import_pose.pose_from_pdbstring"

)

real_command_line_argc

int real_command_line_argc

Referenced by main().

real_command_line_argv

char** real_command_line_argv

Referenced by main().

results_filename

const char results_filename[] = "./../../../../_performance_"

Referenced by main().

Score_

ScoreBenchmark Score_("core.scoring.Score")

(

"core.scoring.Score"

)

ShearMover_

ShearMoverBenchmark ShearMover_("protocols.moves.ShearMover")

(

"protocols.moves.ShearMover"

)

SmallMover_

SmallMoverBenchmark SmallMover_("protocols.moves.SmallMover")

(

"protocols.moves.SmallMover"

)

XMLParseBenchmark_

XMLParseBenchmark XMLParseBenchmark_("utility_tag_Tag_Create")

(

"utility_tag_Tag_Create"

)