decompose_GDT.cc File Reference

#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/Pose.hh>
#include <core/import_pose/import_pose.hh>
#include <core/conformation/Residue.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <devel/init.hh>

Functions
void	get_resmap (pose::Pose const &pose, pose::Pose const &native, std::map< Size, Size > &resmap)
void	decompose (pose::Pose const &pose0, pose::Pose const &pose, pose::Pose const &native, std::string const &pdbname, std::map< Size, Size > &resmap, bool const verbose)
int	main (int argc, char *argv[])

Function Documentation

decompose()

void decompose	(	pose::Pose const &	pose0,
		pose::Pose const &	pose,
		pose::Pose const &	native,
		std::string const &	pdbname,
		std::map< Size, Size > &	resmap,
		bool const	verbose
	)

References dist(), numeric::xyzVector< T >::dot(), surface_app::native, basic::options::OptionKeys::dna::specificity::nloop, create_a3b_hbs::nres, predPRE::pdbname, beta_nonlocal::pose, printf(), and basic::options::OptionKeys::sc::verbose.

Referenced by main().

get_resmap()

void get_resmap	(	pose::Pose const &	pose,
		pose::Pose const &	native,
		std::map< Size, Size > &	resmap
	)

References create_a3b_hbs::ii, beta_nonlocal::jj, surface_app::native, and beta_nonlocal::pose.

Referenced by main().

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, decompose(), basic::options::OptionKeys::in::file::dssp, get_resmap(), create_a3b_hbs::i, basic::init(), in::file::native(), surface_app::native, option, predPRE::pdbname, pyrosetta.distributed.io::pose_from_file(), in::file::s(), and subloop_histogram::size.