interface_statistics.cc File Reference

Computing interface statistics for membrane protein interfaces. More...

#include <devel/init.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/conformation/Conformation.hh>
#include <protocols/scoring/Interface.fwd.hh>
#include <protocols/scoring/Interface.hh>
#include <core/scoring/sc/ShapeComplementarityCalculator.hh>
#include <protocols/moves/Mover.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/scoring/hbonds/HBondSet.hh>
#include <core/scoring/hbonds/HBondDatabase.hh>
#include <core/scoring/hbonds/hbonds.hh>
#include <core/pose/metrics/CalculatorFactory.hh>
#include <protocols/pose_metric_calculators/PiPiCalculator.hh>
#include <protocols/membrane/AddMembraneMover.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/docking.OptionKeys.gen.hh>
#include <basic/options/keys/mp.OptionKeys.gen.hh>
#include <basic/options/keys/intf.OptionKeys.gen.hh>
#include <core/scoring/sasa/SasaCalc.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/chains_util.hh>
#include <core/pose/subpose_manipulation_util.hh>
#include <core/types.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/Job.hh>
#include <utility/excn/Exceptions.hh>
#include <basic/Tracer.hh>
#include <ObjexxFCL/format.hh>
#include <utility/vector1.hh>
#include <utility/string_util.hh>
#include <core/scoring/sasa/util.hh>
#include <protocols/docking/util.hh>
#include <protocols/membrane/util.hh>

Classes
class	MPInterfaceStatistics

Typedefs
using	MPInterfaceStatisticsOP = utility::pointer::shared_ptr< MPInterfaceStatistics >

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pilot.jkleman.interface_statistics")

Detailed Description

Computing interface statistics for membrane protein interfaces.

last Modified: 8/28/15

Author

JKLeman (julia.nosp@m..koe.nosp@m.hler1.nosp@m.982@.nosp@m.gmail.nosp@m..com)

Typedef Documentation

MPInterfaceStatisticsOP

using MPInterfaceStatisticsOP = utility::pointer::shared_ptr<MPInterfaceStatistics>

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, basic::init(), and MPInterfaceStatistics::MPInterfaceStatistics().

Variable Documentation

TR

basic::Tracer TR("apps.pilot.jkleman.interface_statistics") ( "apps.pilot.jkleman.interface_statistics"  )

static

Referenced by MPInterfaceStatistics::add_to_scorefile(), MPInterfaceStatistics::apply(), MPInterfaceStatistics::fill_vectors_with_data(), MPInterfaceStatistics::get_number_pi_stacking(), MPInterfaceStatistics::get_residue_size(), and MPInterfaceStatistics::print_aa_statistics().