karen_compare_different_proteins.cc File Reference

#include <iostream>
#include <fstream>
#include <string>
#include <devel/init.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <basic/options/option_macros.hh>
#include <core/conformation/Conformation.hh>
#include <utility/io/ozstream.hh>
#include <numeric/xyz.functions.hh>
#include <core/import_pose/import_pose.hh>
#include <Eigen/SVD>
#include <protocols/pockets/PocketGrid.hh>

Functions
void	test_PCA_eigen ()
int	main (int argc, char *argv[])
	General testing code. More...

Variables
static basic::Tracer	TR ("apps.pilot.karen_pocket_compare.main")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

General testing code.

References argv, utility::io::oc::cout, test.T009_Exceptions::e, utility::options::OptionKeys::options::exit, basic::init(), ObjexxFCL::int_of(), create_a3b_hbs::j, NEW_OPT, option, pyrosetta.distributed.io::pose_from_file(), predPRE::resnum, basic::options::start_file(), TR, numeric::x_rotation_matrix_degrees(), numeric::y_rotation_matrix_degrees(), and numeric::xyzVector< T >::zero().

test_PCA_eigen()

void test_PCA_eigen

(

)

References spectral_cluster_kmeans_adaptive_kernel_density_bb_dependent_rotlib::A, utility::io::oc::cerr, utility::io::oc::cout, utility::options::OptionKeys::options::exit, val2thr::fout, create_a3b_hbs::j, and erraser_single_res_analysis::out.

Variable Documentation

TR

basic::Tracer TR("apps.pilot.karen_pocket_compare.main") ( "apps.pilot.karen_pocket_compare.main"  )

static

Referenced by main().