|
Rosetta
|
#include <protocols/domain_assembly/AssembleLinkerMover.hh>#include <protocols/domain_assembly/AddAssemblyConstraints.hh>#include <protocols/comparative_modeling/util.hh>#include <protocols/docking/DockingProtocol.hh>#include <protocols/docking/DockingLowRes.hh>#include <protocols/docking/stateless/SaneDockingProtocol.hh>#include <protocols/jd2/JobDistributor.hh>#include <protocols/loops/LoopMoverFactory.hh>#include <protocols/loops/LoopMover.hh>#include <protocols/loops/Loop.hh>#include <protocols/loops/Loops.hh>#include <protocols/loops/loops_main.hh>#include <core/fragment/FragSet.hh>#include <core/fragment/FragSet.fwd.hh>#include <core/kinematics/FoldTree.hh>#include <core/conformation/Residue.hh>#include <core/conformation/Conformation.hh>#include <core/pose/Pose.hh>#include <core/pose/PDBInfo.hh>#include <core/pose/util.hh>#include <core/io/pdb/pdb_writer.hh>#include <core/scoring/constraints/util.hh>#include <core/scoring/ScoreFunctionFactory.hh>#include <protocols/relax/FastRelax.hh>#include <core/chemical/ChemicalManager.fwd.hh>#include <core/scoring/func/Func.hh>#include <core/scoring/constraints/Constraint.hh>#include <core/scoring/constraints/ConstraintSet.hh>#include <core/scoring/func/LinearPenaltyFunction.hh>#include <core/scoring/constraints/AtomPairConstraint.hh>#include <protocols/moves/Mover.hh>#include <protocols/simple_moves/ScoreMover.hh>#include <protocols/moves/CompositionMover.hh>#include <protocols/constraint_movers/ConstraintSetMover.hh>#include <devel/init.hh>#include <utility/excn/Exceptions.hh>#include <iostream>#include <string>#include <basic/Tracer.hh>#include <core/types.hh>#include <utility/vector1.hh>#include <basic/options/keys/cm.OptionKeys.gen.hh>#include <basic/options/keys/loops.OptionKeys.gen.hh>#include <basic/options/keys/constraints.OptionKeys.gen.hh>#include <basic/options/option.hh>#include <core/scoring/saxs/SAXSEnergy.hh>Functions | |
| int | main (int argc, char *argv[]) |
| int main | ( | int | argc, |
| char * | argv[] | ||
| ) |
References argv, pyrosetta.io::create_score_function, basic::options::OptionKeys::docking::docking, test.T009_Exceptions::e, basic::options::OptionKeys::dna::specificity::frag_files, pyrosetta.distributed.io::get_score_function(), basic::init(), basic::options::OptionKeys::cm::min_loop_size, cm::min_loop_size(), option, basic::options::OptionKeys::abinitio::relax, test.Workshop4test::score3, oop_conformations::scorefxn, basic::options::OptionKeys::frags::scoring::scoring, and basic::options::OptionKeys::inout::dbms::user.
1.9.1