SapConstraintHelper.cc File Reference

Score term that applies the RotamerPSSMConstraint as an energy. More...

#include <core/pack/guidance_scoreterms/sap/SapConstraintHelper.hh>
#include <core/pack/guidance_scoreterms/sap/SapConstraintOptions.hh>
#include <core/pack/guidance_scoreterms/sap/util.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/pose/init_id_map.hh>
#include <core/pose/symmetry/util.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/etable/EtableOptions.hh>
#include <core/conformation/util.hh>
#include <core/pack/packer_neighbors.hh>
#include <core/pack/rotamer_set/RotamerSet.hh>
#include <core/pack/rotamer_set/RotamerSet_.hh>
#include <core/pack/rotamer_set/symmetry/SymmetricRotamerSet_.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/OperateOnResidueSubset.hh>
#include <core/pack/task/operation/ResLvlTaskOperations.hh>
#include <core/select/util.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <utility/pointer/memory.hh>
#include <utility/graph/Graph.hh>
#include <boost/format.hpp>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <utility/stream_util.hh>

Namespaces
	core
	A class for reading in the atom type properties.
	core::pack
	core::pack::guidance_scoreterms
	core::pack::guidance_scoreterms::sap

Functions
static basic::Tracer	TR ("core.pack.guidance_scoreterms.sap.SapConstraintHelper")
void	core::pack::guidance_scoreterms::sap::find_mismatch (select::residue_selector::ResidueSubset const &small_sub, select::residue_selector::ResidueSubset const &big_sub, std::string const &small_name, std::string const &big_name)
Size	core::pack::guidance_scoreterms::sap::upper_triangle_offset (Size y, Size x, Size size)

Detailed Description

Score term that applies the RotamerPSSMConstraint as an energy.

Author

Brian Coventry (bcov@.nosp@m.uw.e.nosp@m.du)

Function Documentation

TR()

static basic::Tracer TR ( "core.pack.guidance_scoreterms.sap.SapConstraintHelper"  )

static