PairingLibrary.cc File Reference

#include <protocols/jumping/PairingLibrary.hh>
#include <protocols/jumping/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/types.hh>
#include <core/conformation/Conformation.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/Stub.hh>
#include <core/id/NamedStubID.hh>
#include <core/fragment/FragData.hh>
#include <core/fragment/FragSet.hh>
#include <core/fragment/BBTorsionSRFD.hh>
#include <core/fragment/JumpSRFD.hh>
#include <core/fragment/JumpingFrame.hh>
#include <core/scoring/dssp/PairingsList.hh>
#include <ObjexxFCL/FArray2A.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <basic/Tracer.hh>
#include <basic/database/open.hh>
#include <numeric/random/random.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzMatrix.fwd.hh>
#include <string>
#include <ObjexxFCL/FArray2D.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jumping

Functions
static basic::Tracer	tr ("protocols.jumping")
void	protocols::jumping::get_coordinate_system (numeric::xyzMatrix_double const &p, numeric::xyzMatrix_double &m)
void	protocols::jumping::get_ncac (FArray2A_float pos, numeric::xyzMatrix_double &p)
numeric::xyzMatrix_double	protocols::jumping::get_ncac (FArray2A_float pos)
RT	protocols::jumping::RT_from_epos (FArray2A_float Epos1, FArray2A_float Epos2)

Function Documentation

tr()

static basic::Tracer tr ( "protocols.jumping"  )

static

Author

Bjorn Wallner

Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)