ThermalSamplingMover.cc File Reference

Use a simulated tempering simulation to refine a pose. More...

#include <protocols/recces/scratch/ThermalSamplingMover.hh>
#include <protocols/recces/scratch/ThermalSamplingMoverCreator.hh>
#include <core/pose/Pose.hh>
#include <basic/Tracer.hh>
#include <core/types.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/kinematics/MoveMap.hh>
#include <basic/options/option.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/import_pose/pose_stream/PoseInputStream.fwd.hh>
#include <utility/vector1.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <core/id/TorsionID.hh>
#include <protocols/recces/sampler/rna/MC_RNA_Suite.hh>
#include <protocols/recces/sampler/rna/MC_RNA_MultiSuite.hh>
#include <protocols/recces/sampler/rna/MC_RNA_KIC_Sampler.hh>
#include <protocols/recces/util.hh>
#include <protocols/recces/scratch/thermal_sampler.hh>
#include <protocols/recces/Histogram.hh>
#include <protocols/moves/SimulatedTempering.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/recces.OptionKeys.gen.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <utility/pointer/memory.hh>
#include <core/io/silent/SilentFileData.hh>
#include <numeric/random/random.hh>
#include <protocols/recces/sampler/MC_OneTorsion.hh>
#include <utility/stream_util.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::recces
	protocols::recces::scratch

Functions
static basic::Tracer	TR ("protocols.recces.scratch.ThermalSamplingMover")
Size	protocols::recces::scratch::find_likely_first_chain_ending (Pose const &pose)
	at least in the helix-strand case, will successfully distinguish a bad bond length from actual breaks More...
std::ostream &	protocols::recces::scratch::operator<< (std::ostream &os, ThermalSamplingMover const &mover)

Detailed Description

Use a simulated tempering simulation to refine a pose.

Author

Andy Watkins (amw57.nosp@m.9@ny.nosp@m.u.edu)

Function Documentation

TR()

static basic::Tracer TR ( "protocols.recces.scratch.ThermalSamplingMover"  )

static