SymmetricCycpepAlign.cc File Reference

Given a quasi-symmetric cyclic peptide, this mover aligns the peptide so that the cyclic symmetry axis lies along the Z-axis and the centre of mass is at the origin. It then optionally removes all but one symmetry repeat, so that true symmetry may be set up with the SetupForSymmetry mover. More...

#include <protocols/cyclic_peptide/SymmetricCycpepAlign.hh>
#include <protocols/cyclic_peptide/SymmetricCycpepAlignCreator.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pose/Pose.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/Residue.hh>
#include <core/select/residue_selector/ReturnResidueSubsetSelector.hh>
#include <protocols/cyclic_peptide/CycpepSymmetryFilter.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzVector.hh>
#include <basic/Tracer.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::cyclic_peptide

Functions
static basic::Tracer	TR ("protocols.cyclic_peptide.SymmetricCycpepAlign")
std::ostream &	protocols::cyclic_peptide::operator<< (std::ostream &os, SymmetricCycpepAlign const &mover)
	private methods /// More...

Detailed Description

Given a quasi-symmetric cyclic peptide, this mover aligns the peptide so that the cyclic symmetry axis lies along the Z-axis and the centre of mass is at the origin. It then optionally removes all but one symmetry repeat, so that true symmetry may be set up with the SetupForSymmetry mover.

Author

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m.w.edu)

Function Documentation

TR()

static basic::Tracer TR ( "protocols.cyclic_peptide.SymmetricCycpepAlign"  )

static