Here is a list of all class members with links to the classes they belong to:
- c -
- c
: basic::sampling::orientations::Triple
 
- C
: binder::ClassBinder
, binder::ConstructorBindingInfo
, svm_parameter
 
- c0
: numeric::CubicPolynomial
 
- c1
: numeric::CubicPolynomial
 
- c2
: numeric::CubicPolynomial
 
- c3
: numeric::CubicPolynomial
 
- c_str()
: fmt::BasicCStringRef< Char >
, fmt::BasicWriter< Char >
, fmt::FormatInt
, ObjexxFCL::Fstring
 
- c_str_
: ObjexxFCL::Fstring
 
- Cache()
: Cache
 
- cache
: ONE_CLASS_Q
, SVC_Q
, SVR_Q
 
- cache_size
: svm_parameter
 
- CacheableString()
: basic::datacache::CacheableString
 
- CacheableStringFloatMap()
: basic::datacache::CacheableStringFloatMap
 
- CacheableStringIntegerMap()
: basic::datacache::CacheableStringIntegerMap
 
- CacheableStringMap()
: basic::datacache::CacheableStringMap
 
- CacheableUint64MathMatrixFloatMap()
: basic::datacache::CacheableUint64MathMatrixFloatMap
 
- cached_value_
: utility::options::FileOption
 
- CacheEdges_
: numeric::VoxelGrid< typename >
 
- calc_bb_E()
: HDdesignMover
 
- calc_coordinate_rmsd()
: numeric::alignment::QCPKernel< Real >
 
- calc_coordinate_superposition()
: numeric::alignment::QCPKernel< Real >
 
- calc_rmsd_Theobald_method()
: numeric::alignment::QCPKernel< Real >
 
- calc_rmsds()
: RNA_DeNovoJobQueen
 
- calculate()
: HPatchByChainNPDCalculator
, HPatchNPDCalculator
, NBuriedUnsatsCalcultor
 
- calculate_auc()
: numeric::RocCurve
 
- calculate_rho()
: Solver
, Solver_NU
 
- calculate_tracer_level()
: basic::TracerImpl
 
- calculate_visibility()
: basic::TracerImpl
, basic::TracerImpl::TracerProxyImpl
 
- Calculator()
: numeric::Calculator
 
- calculator_name()
: HPatchByChainNPDCalculatorCreator
, HPatchNPDCalculatorCreator
, NBuriedUnsatsCalcultorCreator
 
- CalculatorParser()
: numeric::CalculatorParser
 
- can_hold_another()
: utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VectorOption_T_< K, T >
 
- can_load()
: pyrosetta.protocols.h5_structure_store_provider.H5StructureStoreProvider
 
- can_write()
: pyrosetta.protocols.h5_structure_store_provider.H5StructureStoreProvider
 
- Canonicalize()
: basic::sampling::orientations::Quaternion
 
- capacity()
: fmt::Buffer< T >
, numeric::random::WeightedReservoirSampler< T >
, ObjexxFCL::Chunk< T >
, utility::heap
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
 
- capacity_
: fmt::Buffer< T >
, numeric::random::WeightedReservoirSampler< T >
, ObjexxFCL::Chunk< T >
 
- CArray
: ObjexxFCL::CArray< typename >
 
- CArrayP
: ObjexxFCL::CArrayP< typename >
 
- cas_
: CAtrace
 
- cast()
: fmt::internal::BasicCharTraits< Char >
 
- CategorizedConstObjectMap
: basic::datacache::ConstDataMap
 
- category_
: utility::tag::XMLSchemaElement
 
- category_map()
: basic::datacache::DataMap
 
- CaToAllAtom()
: CaToAllAtom
 
- CAtrace()
: CAtrace
 
- center
: numeric::interpolation::Histogram< typename, typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::Cstring
, ObjexxFCL::Fstring
 
- center_
: FragInfo
 
- centered()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
 
- centroid_
: ScoreEachBenchmark
, zinc1_homodimer_design
 
- centroid_scorefxn_for_ddG_calc_
: zinc1_homodimer_design
 
- cfg_nd()
: numeric::fourier::kiss_fftndr_state
 
- cfg_nd_
: numeric::fourier::kiss_fftndr_state
 
- cfg_r()
: numeric::fourier::kiss_fftndr_state
 
- cfg_r_
: numeric::fourier::kiss_fftndr_state
 
- chain_
: sidechain_cst_3.Residue
 
- chain_char_
: ExposedStrandMover
 
- chains_
: HPatchByChainNPDCalculator
 
- channel()
: basic::Tracer
, basic::TracerImpl
 
- channel_
: basic::Tracer
, basic::TracerImpl
, basic::TracerImpl::TracerProxyImpl
 
- channel_color()
: basic::TracerImpl
 
- channel_color_
: basic::Tracer
, basic::TracerImpl
 
- channel_id_
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
 
- channel_name_color()
: basic::TracerImpl
 
- channel_name_color_
: basic::Tracer
, basic::TracerImpl
 
- Char
: fmt::BasicFormatter< CharType, ArgFormatter >
, fmt::internal::MakeValue< Formatter >
 
- CHAR
: fmt::internal::Value
 
- Char
: fmt::SystemError
 
- char_allocator_type
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
 
- char_buffer_p_
: utility::io::ozstream
 
- CHAR_CONST_P
: utility::options::FileOption
 
- char_msg()
: utility::SimulateMPIMessage
 
- char_msg_
: utility::SimulateMPIMessage
 
- char_of()
: ObjexxFCL::Fstring
 
- char_type
: utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
, utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
 
- Char_type
: utility::json_spirit::Generator< Value_type, Ostream_type >
, utility::json_spirit::Multi_pass_iters< Istream_type >
, utility::json_spirit::Semantic_actions< Value_type, Iter_type >
 
- char_type
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
 
- char_vector_type
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
 
- CharPtr
: fmt::BasicWriter< Char >
, fmt::internal::BasicCharTraits< Char >
 
- check_crc()
: utility::io::izstream
, zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
 
- check_data_size()
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
 
- check_for_hbonds()
: BacksideHbondFinderMover
 
- check_header()
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
 
- check_invariants()
: numeric::Polynomial_1d
 
- check_key()
: utility::options::OptionCollection
 
- check_no_auto_index()
: fmt::internal::FormatterBase
 
- check_restricted_access()
: utility::options::Option
 
- check_rmsd_
: ExposedStrandMover
 
- check_specs()
: utility::options::OptionCollection
 
- check_table_and_perform_write()
: basic::database::schema_generator::Schema
 
- check_type()
: utility::json_spirit::Value_impl< Config >
 
- check_values()
: utility::options::OptionCollection
 
- chi_angles
: local::HbondInfo
 
- child()
: numeric::expression_parser::ArithmeticASTFactor
 
- child_
: numeric::expression_parser::ArithmeticASTFactor
 
- children_
: numeric::expression_parser::ArithmeticASTAndClause
, numeric::expression_parser::ArithmeticASTExpression
, numeric::expression_parser::ArithmeticASTFunction
, numeric::expression_parser::ArithmeticASTOrClause
, numeric::expression_parser::ArithmeticASTRestAndClause
, numeric::expression_parser::ArithmeticASTRestExpression
, numeric::expression_parser::ArithmeticASTRestOrClause
, numeric::expression_parser::ArithmeticASTRestTerm
, numeric::expression_parser::ArithmeticASTTerm
, utility::tag::XMLSchemaRepeatableCTNode
 
- children_begin()
: numeric::expression_parser::ArithmeticASTAndClause
, numeric::expression_parser::ArithmeticASTExpression
, numeric::expression_parser::ArithmeticASTFunction
, numeric::expression_parser::ArithmeticASTOrClause
, numeric::expression_parser::ArithmeticASTRestAndClause
, numeric::expression_parser::ArithmeticASTRestExpression
, numeric::expression_parser::ArithmeticASTRestOrClause
, numeric::expression_parser::ArithmeticASTRestTerm
, numeric::expression_parser::ArithmeticASTTerm
 
- children_end()
: numeric::expression_parser::ArithmeticASTAndClause
, numeric::expression_parser::ArithmeticASTExpression
, numeric::expression_parser::ArithmeticASTFunction
, numeric::expression_parser::ArithmeticASTOrClause
, numeric::expression_parser::ArithmeticASTRestAndClause
, numeric::expression_parser::ArithmeticASTRestExpression
, numeric::expression_parser::ArithmeticASTRestOrClause
, numeric::expression_parser::ArithmeticASTRestTerm
, numeric::expression_parser::ArithmeticASTTerm
 
- Chunk
: ObjexxFCL::Chunk< T >
 
- chunk
: utility::sql_database::TransactionMode
 
- chunk_exponent()
: ObjexxFCL::ChunkVector< typename >
 
- chunk_exponent_
: ObjexxFCL::ChunkVector< typename >
 
- chunk_mask_
: ObjexxFCL::ChunkVector< typename >
 
- chunk_size()
: ObjexxFCL::ChunkVector< typename >
 
- chunk_size_
: ObjexxFCL::ChunkVector< typename >
, utility::sql_database::session
 
- Chunk_type
: ObjexxFCL::ChunkVector< typename >
 
- ChunkExponent()
: ObjexxFCL::ChunkExponent
 
- Chunks
: ObjexxFCL::ChunkVector< typename >
 
- chunks_
: ObjexxFCL::ChunkVector< typename >
 
- Chunks_size_type
: ObjexxFCL::ChunkVector< typename >
 
- ChunksSize
: ObjexxFCL::ChunkVector< typename >
 
- ChunkType
: ObjexxFCL::ChunkVector< typename >
 
- ChunkVector
: ObjexxFCL::ChunkVector< typename >
 
- cl_value()
: utility::options::Option
, utility::options::ResidueChainVectorOption
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
 
- clash()
: numeric::geometry::hashing::MinimalClashHash
, numeric::geometry::hashing::xyzStripeHash
 
- clash2b
: FragmentAssemblyMover
 
- clash_amount()
: numeric::geometry::hashing::xyzStripeHash
 
- clash_ball()
: numeric::geometry::hashing::MinimalClashHash
 
- clash_check_ball()
: numeric::geometry::hashing::xyzStripeHash
 
- clash_check_balls()
: numeric::geometry::hashing::MinimalClashHash
 
- clash_check_residue_pairs()
: numeric::geometry::hashing::xyzStripeHash
 
- clash_dist_
: ScoreFragmentSetMover
 
- clash_not_resid()
: numeric::geometry::hashing::xyzStripeHash
 
- clash_raw()
: numeric::geometry::hashing::xyzStripeHash
 
- clash_score()
: ScoreFragmentSetMover
 
- clash_wt_
: FragmentAssemblyMover
 
- Class_
: binder::vector_binder< T, Allocator >
, rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >
 
- class_qualified_name
: binder::ConstructorBindingInfo
 
- ClassBinder()
: binder::ClassBinder
 
- classes_to_bind
: binder::Config
 
- classes_to_skip
: binder::Config
 
- ClassKeyMap()
: utility::keys::ClassKeyMap< K, T, C >
 
- ClassKeyVector()
: utility::keys::ClassKeyVector< K, T, C >
 
- classname()
: basic::resource_manager::locator::DatabaseResourceLocator
, basic::resource_manager::locator::FileListResourceLocator
, basic::resource_manager::locator::FileSystemResourceLocator
, basic::resource_manager::locator::NullResourceLocator
 
- ClassVisitor()
: ClassVisitor
 
- cleaned()
: utility::options::OptionCollection
 
- clear()
: basic::datacache::DataCache< Data >
, basic::resource_manager::ResourceManager
 
- Clear()
: basic::sampling::orientations::QuatSet
 
- clear()
: binder::IncludeSet
, fmt::BasicWriter< Char >
, fmt::Buffer< T >
, numeric::IntervalSet< typename >
, numeric::random::WeightedSampler
, numeric::sphericalVector< typename >
 
- Clear()
: numeric::VoxelGrid< typename >
 
- clear()
: numeric::xyzMatrix< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::Dimension
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArrayInitializer< typename, class >
, ObjexxFCL::Fstring
, ObjexxFCL::IndexRange
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, ObjexxFCL::StaticIndexRange
, pyrosetta.bindings.pose.PoseScoreAccessor
, pyrosetta.bindings.pose.ResidueLabelAccessor
, utility::Bound< typename >
, utility::file::FileName
, utility::file::PathName
, utility::graph::ArrayPool< T >
, utility::in_place_list< T >
, utility::io::FileContentsMap
, utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::options::Option
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
, utility::recent_history_queue
, utility::signals::SignalHub< ResultType, Signal >
, utility::tag::Tag
 
- clear_buffer()
: utility::signals::BufferedSignalHub< ResultType, Signal >
 
- clear_input_files()
: utility::Inline_File_Provider
 
- clear_no_notify()
: ObjexxFCL::Dimension
, ObjexxFCL::DynamicIndexRange
 
- clear_processed_msgs()
: utility::SimulateMPIData
 
- clear_rms()
: numeric::model_quality::RmsData
 
- clear_tokens()
: utility::signals::TokenHub< ResultType, Signal >
 
- client
: pyrosetta.tests.distributed.test_dask.TestDaskDistribution
 
- Client
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
 
- client_type
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
 
- cloak_and_setup()
: HDdesignMover
 
- clone()
: apps::pilot::frankdt::segment_file_generator
, BacksideHbondFinderMover
, basic::datacache::CacheableData
, basic::datacache::CacheableString
, basic::datacache::CacheableStringFloatMap
, basic::datacache::CacheableStringIntegerMap
, basic::datacache::CacheableStringMap
, basic::datacache::CacheableUint64MathMatrixFloatMap
, basic::datacache::DiagnosticData
, basic::datacache::WriteableCacheableMap
, basic::MetricValue< T >
, basic::MetricValueBase
, DockGlycansProtocol
, ExemplarMover
, ExposedStrandMover
, HDdesignMover
, HDmakerMover
, LigandDockBench
, MetalSiteFinderMover
, Minimize
, MyScoreMover
, NCMinimize
 
- Clone()
: numeric::interpolation::spline::BicubicSpline
 
- clone()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CompoundInterpolator
, numeric::interpolation::spline::CubicSpline
, numeric::interpolation::spline::Interpolator
, numeric::interpolation::spline::PolycubicSpline< N >
, numeric::interpolation::spline::PolycubicSpline< 1 >
, numeric::interpolation::spline::PolycubicSpline< 2 >
, numeric::interpolation::spline::PolycubicSplineBase
, numeric::interpolation::spline::SimpleInterpolator
 
- Clone()
: numeric::interpolation::spline::TricubicSpline
, numeric::MathMatrix< T >
 
- clone()
: numeric::MathNTensor< T, N >
, numeric::MathNTensorBase< T >
, numeric::MathVector< T >
, ObjexxFCL::Dimension
, ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
, test.T850_SubClassing.MyNewCI1B
 
- Clone()
: utility::graph::RingDetection< Graph >
 
- clone()
: utility::io::GeneralFileContents
, utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
, utility::options::AnyOption< T >
, utility::options::AnyOptionKey
, utility::options::AnyVectorOption< T >
, utility::options::AnyVectorOptionKey
, utility::options::BooleanOption
, utility::options::BooleanOptionKey
, utility::options::BooleanVectorOption
, utility::options::BooleanVectorOptionKey
, utility::options::FileOption
, utility::options::FileOptionKey
, utility::options::FileVectorOption
, utility::options::FileVectorOptionKey
, utility::options::IntegerOption
, utility::options::IntegerOptionKey
, utility::options::IntegerVectorOption
, utility::options::IntegerVectorOptionKey
, utility::options::Option
, utility::options::OptionKey
, utility::options::PathOption
, utility::options::PathOptionKey
, utility::options::PathVectorOption
, utility::options::PathVectorOptionKey
, utility::options::RealOption
, utility::options::RealOptionKey
, utility::options::RealVectorOption
, utility::options::RealVectorOptionKey
, utility::options::ResidueChainVectorOption
, utility::options::ResidueChainVectorOptionKey
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::ScalarOptionKey
, utility::options::StringOption
, utility::options::StringOptionKey
, utility::options::StringVectorOption
, utility::options::StringVectorOptionKey
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
, utility::options::VectorOptionKey
, utility::tag::Tag
 
- closability_score()
: ScoreFragmentSetMover
 
- close()
: fmt::BufferedFile
, fmt::File
, options.KeepSameFile
, pyrosetta.distributed.utility.log.LoggingContext
, utility::io::izstream
, utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
, utility::io::ozstream
 
- close2b
: FragmentAssemblyMover
 
- close_wt_
: FragmentAssemblyMover
 
- closest_match()
: numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real >
 
- closest_match_subset()
: numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real >
 
- cluster()
: numeric::AgglomerativeHierarchicalClusterer
 
- cluster_frags()
: DockFragmentsMover
 
- cluster_RMSD
: erraser_option.erraser_option
 
- ClusteringTreeNode()
: numeric::ClusteringTreeNode
 
- ClusterOptions()
: numeric::ClusterOptions
 
- cm_
: ResidueTypeBenchmark
 
- cmd_opts
: mutant_modeler.MutantModeler
 
- Cn
: Solver
 
- code()
: binder::Binder
, utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
, utility::keys::VariantKey< K >
, utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
 
- code_
: binder::Binder
, utility::keys::AutoKey< O, S, C >
, utility::keys::UserKey< O, S, C >
 
- coef
: numeric::kinematic_closure::p
 
- coef0
: Kernel
, svm_parameter
 
- coefficients()
: numeric::Polynomial_1d
 
- coefficients_
: numeric::Polynomial_1d
 
- coefLoc()
: numeric::fourier::SO3coeffs
 
- cofactors
: arls_impl.DockingCase
 
- coheap_
: utility::heap
 
- col()
: numeric::xyzMatrix< typename >
 
- col_x()
: numeric::xyzMatrix< typename >
 
- col_y()
: numeric::xyzMatrix< typename >
 
- col_z()
: numeric::xyzMatrix< typename >
 
- collapse()
: numeric::MultiDimensionalHistogram
 
- color
: test.Workshop9_my_shapes.MyShape
 
- ColPointers()
: numeric::ColPointers< T >
 
- cols()
: numeric::xyzMatrix< typename >
 
- cols_constructor()
: numeric::xyzMatrix< typename >
 
- ColsAtCompileTime
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
 
- ColsPointer()
: numeric::ColsPointer< T >
 
- Column()
: basic::database::schema_generator::Column
 
- column_
: utility::json_spirit::Error_position
 
- column_index_map_
: basic::database::insert_statement_generator::InsertGenerator
 
- column_list_
: basic::database::insert_statement_generator::InsertGenerator
 
- column_name_
: basic::database::insert_statement_generator::RowDataBase
 
- column_separator_
: basic::resource_manager::locator::DatabaseResourceLocator
 
- columns()
: basic::database::schema_generator::ForeignKey
, basic::database::schema_generator::Index
, basic::database::schema_generator::PrimaryKey
 
- columns_
: basic::database::schema_generator::Constraint
, basic::database::schema_generator::ForeignKey
, basic::database::schema_generator::Index
, basic::database::schema_generator::PrimaryKey
, basic::database::schema_generator::Schema
 
- ColVectors()
: numeric::ColVectors< T >
 
- CombinePaths()
: utility::graph::RingDetection< Graph >
 
- commit_transaction()
: utility::sql_database::session
 
- common_type()
: utility::tag::XMLSchemaType
 
- common_type_
: utility::tag::XMLSchemaType
 
- comparable
: ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::ChunkVector< typename >
, utility::keys::AutoKey< O, S, C >
, utility::keys::Key
, utility::keys::UserKey< O, S, C >
 
- comparator()
: numeric::AgglomerativeHierarchicalClusterer
, numeric::AverageLinkClusterer
, numeric::CompleteLinkClusterer
, numeric::SingleLinkClusterer
 
- compare()
: fmt::BasicStringRef< Char >
, sidechain_cst_3.Residue
 
- compare_to_full_WT
: mutant_modeler.MutantModeler
 
- CompareKDPoints()
: numeric::kdtree::CompareKDPoints
 
- ComparingTracer()
: basic::ComparingTracer
 
- complete_larval_job_maturation()
: RNA_DeNovoJobQueen
, StepWiseJobQueen
 
- complex_type_
: utility::tag::XMLSchemaElement
 
- complex_type_name_for_loader()
: basic::resource_manager::ResourceLoaderFactory
 
- complex_type_name_for_locator()
: basic::resource_manager::ResourceLocatorFactory
 
- complex_type_name_for_resource_def()
: basic::resource_manager::ResourceManager
 
- complex_type_naming_func()
: utility::tag::XMLSchemaComplexTypeGenerator
, utility::tag::XMLSchemaComplexTypeGeneratorImpl
, utility::tag::XMLSchemaSimpleSubelementList
 
- complex_type_naming_function_
: utility::tag::XMLSchemaComplexTypeGeneratorImpl
 
- complex_typename_for_element()
: utility::tag::XMLSchemaSimpleSubelementList
 
- ComplexScalar
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
 
- CompoundInterpolator()
: numeric::interpolation::spline::CompoundInterpolator
 
- compress()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor
 
- compressed()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
 
- Compression
: utility::io::izstream
, utility::io::ozstream
 
- compression_
: utility::io::izstream
, utility::io::ozstream
 
- compute()
: numeric::Calculator
, numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
 
- compute_in_place()
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
 
- compute_lb_function_solution()
: numeric::interpolation::spline::Interpolator
 
- compute_ub_function_solution()
: numeric::interpolation::spline::Interpolator
 
- computed_last_chunk_size()
: ObjexxFCL::ChunkVector< typename >
 
- computed_n_chunk()
: ObjexxFCL::ChunkVector< typename >
 
- condition()
: numeric::expression_parser::ITEExpression
 
- condition_
: numeric::expression_parser::ITEExpression
 
- Config()
: binder::Config
 
- Config_type
: utility::json_spirit::Generator< Value_type, Ostream_type >
, utility::json_spirit::Semantic_actions< Value_type, Iter_type >
, utility::json_spirit::Value_impl< Config >
 
- conjugate()
: numeric::Quaternion< typename >
 
- conjugated()
: numeric::Quaternion< typename >
 
- connect()
: utility::signals::SignalHub< ResultType, Signal >
 
- connect_tokenize()
: utility::signals::TokenHub< ResultType, Signal >
 
- connected_vertices_
: utility::graph::HideVertexVisitor< Graph >
 
- consider_sample()
: numeric::random::WeightedReservoirSampler< T >
 
- const_begin()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
 
- const_data_reference_type
: numeric::VoxelArray< _Float, _Value >
 
- const_edge()
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
 
- const_edge_list_begin()
: utility::graph::Digraph
, utility::graph::DirectedNode
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
 
- const_edge_list_end()
: utility::graph::Digraph
, utility::graph::DirectedNode
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
 
- const_end()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
 
- const_incoming_edge_list_begin()
: utility::graph::DirectedNode
 
- const_incoming_edge_list_end()
: utility::graph::DirectedNode
 
- const_iterator
: basic::datacache::ConstDataMap
, basic::datacache::DataMap
, numeric::geometry::hashing::xyzStripeHash::const_iterator
, numeric::kdtree::KDPointList
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::SetWrapper< typename >
, utility::BitSet< B >
, utility::BitVector< B >
, utility::DereferenceIterator< Container >
, utility::fixedsizearray0< T, S >
, utility::fixedsizearray1< T, S >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::lookup::begin< K >
, utility::keys::lookup::end< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::options::VectorOption_T_< K, T >
, utility::OrderedTuple< T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- const_last()
: utility::graph::DirectedEdgeList
, utility::graph::EdgeList
 
- const_location()
: numeric::kdtree::KDPoint
 
- const_lower_edge_list_begin()
: utility::graph::Node
 
- const_lower_edge_list_end()
: utility::graph::Node
 
- const_next()
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
 
- const_outgoing_edge_list_begin()
: utility::graph::DirectedNode
 
- const_outgoing_edge_list_end()
: utility::graph::DirectedNode
 
- const_pointer
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, numeric::sphericalVector< typename >
, numeric::xyzMatrix< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArraySection< typename >
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, utility::BitSet< B >
, utility::BitVector< B >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- const_previous()
: utility::graph::DirectedEdgeListElement
, utility::graph::EdgeListElement
 
- const_reference
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, numeric::sphericalVector< typename >
, numeric::xyzMatrix< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArraySection< typename >
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, utility::BitSet< B >
, utility::BitVector< B >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- const_reverse_iterator
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- Const_str_ptr
: utility::json_spirit::Value_impl< Config >
 
- const_upper_edge_list_begin()
: utility::graph::Node
, utility::graph::UEVertex< V, E >
 
- const_upper_edge_list_end()
: utility::graph::Node
, utility::graph::UEVertex< V, E >
 
- constant()
: ObjexxFCL::Dimension
, ObjexxFCL::DimensionExpression
, ObjexxFCL::DimensionExpressionCon
, ObjexxFCL::DimensionExpressionCube
, ObjexxFCL::DimensionExpressionDiv
, ObjexxFCL::DimensionExpressionMax
, ObjexxFCL::DimensionExpressionMin
, ObjexxFCL::DimensionExpressionMul
, ObjexxFCL::DimensionExpressionPow
, ObjexxFCL::DimensionExpressionRef
, ObjexxFCL::DimensionExpressionSquare
, ObjexxFCL::DimensionExpressionSub
, ObjexxFCL::DimensionExpressionSum
 
- ConstDataMap()
: basic::datacache::ConstDataMap
 
- ConstIterator
: ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::SetWrapper< typename >
, utility::BitSet< B >
, utility::BitVector< B >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::lookup::begin< K >
, utility::keys::lookup::end< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::options::VectorOption_T_< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- ConstPointer
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, numeric::sphericalVector< typename >
, numeric::xyzMatrix< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArraySection< typename >
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, utility::BitSet< B >
, utility::BitVector< B >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- constrain_chi
: erraser_option.erraser_option
 
- constrain_phosphate
: erraser_option.erraser_option
 
- Constraint()
: basic::database::schema_generator::Constraint
 
- constraint_setter_
: DockGlycansProtocol
 
- constraints_
: basic::database::schema_generator::Schema
 
- ConstReference
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, numeric::sphericalVector< typename >
, numeric::xyzMatrix< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArraySection< typename >
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, utility::BitSet< B >
, utility::BitVector< B >
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyLookup< K >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- ConstReverseIterator
: utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyMapTraits< K, T >
, utility::keys::KeySetTraits< K >
, utility::keys::KeyVector< K, T >
, utility::keys::KeyVectorTraits< K >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
, utility::vector0< T, A >
, utility::vector0< bool, A >
, utility::vector1< T, A >
, utility::vector1< bool, A >
, utility::vectorL< SSize, T, A >
, utility::vectorL< L, bool, A >
 
- construct()
: boost::unordered_object_pool< T, UserAllocator >
 
- contain()
: ObjexxFCL::DynamicIndexRange
, ObjexxFCL::IndexRange
, ObjexxFCL::StaticIndexRange
 
- contain_nic()
: ObjexxFCL::DynamicIndexRange
 
- Container
: ObjexxFCL::SetWrapper< typename >
 
- container
: utility::OrderedTuple< T >
 
- container_
: numeric::kdtree::KDPointList
, ObjexxFCL::SetWrapper< typename >
 
- contains()
: numeric::geometry::BoundingBox< typename >
, numeric::geometry::hashing::SixDCoordinateBinner
, ObjexxFCL::DynamicIndexRange
, ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray1A< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::FArray1P< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray2A< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::FArray2P< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray3A< typename >
, ObjexxFCL::FArray3D< typename >
, ObjexxFCL::FArray3P< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray4A< typename >
, ObjexxFCL::FArray4D< typename >
, ObjexxFCL::FArray4P< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray5A< typename >
, ObjexxFCL::FArray5D< typename >
, ObjexxFCL::FArray5P< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray6A< typename >
, ObjexxFCL::FArray6D< typename >
, ObjexxFCL::FArray6P< typename >
, ObjexxFCL::IndexRange
, ObjexxFCL::KeyFArray1D< typename >
, ObjexxFCL::KeyFArray2D< typename >
, ObjexxFCL::KeyFArray3D< typename >
, ObjexxFCL::KeyFArray4D< typename >
, ObjexxFCL::KeyFArray5D< typename >
, ObjexxFCL::KeyFArray6D< typename >
, utility::vectorL< SSize, T, A >
 
- contains_composite_elements()
: utility::json_spirit::Generator< Value_type, Ostream_type >
 
- context
: binder::ConstructorBindingInfo
, BinderVisitor
 
- continue_at_dimension()
: utility::FixedSizeLexicographicalIterator< S >
, utility::LexicographicalIterator
 
- contract()
: numeric::geometry::BoundingBox< typename >
 
- convert()
: fmt::internal::CharTraits< char >
, fmt::internal::CharTraits< wchar_t >
, utility::py::COP_to_Python_converter< T >
 
- CoordinateArray_RMSD_FlatLookup()
: numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >
 
- coordinates_per_entry
: numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >
 
- CoordMap
: numeric::alignment::QCPKernel< Real >
 
- Coords
: numeric::alignment::QCPKernel< Real >
 
- copy()
: ObjexxFCL::Fstring
 
- copy_array_contents()
: utility::graph::ArrayPoolElement< T >
 
- copy_connectivity()
: utility::graph::Digraph
, utility::graph::Graph
 
- copy_data()
: DockGlycansProtocol
 
- copy_from()
: utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Node
, utility::graph::UpperEdgeGraph< V, E >
, utility::options::Option
, utility::options::ResidueChainVectorOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VectorOption_T_< K, T >
 
- copy_leaf_ids()
: numeric::ClusteringTreeNode
 
- copy_member_ids()
: numeric::ClusteringTreeNode
 
- correct()
: numeric::DietNode< T >
, numeric::DiscreteIntervalEncodingTree< T >
 
- corrected_geo
: erraser_option.erraser_option
 
- cos_of
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
 
- count
: numeric::geometry::hashing::Counter
, numeric::model_quality::RmsData
, pyrosetta.distributed.utility.log.ProgressLogger
 
- count_
: numeric::model_quality::RmsData
, utility::keys::KeyCount
 
- count_dynamic_memory()
: utility::graph::Digraph
, utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Graph
, utility::graph::LowMemEdge
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
 
- count_static_memory()
: utility::graph::Digraph
, utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Graph
, utility::graph::LowMemEdge
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemNode
, utility::graph::Node
 
- Counter()
: numeric::geometry::hashing::Counter
 
- counts()
: numeric::MultiDimensionalHistogram
 
- counts_
: numeric::MultiDimensionalHistogram
 
- coval()
: utility::heap
 
- coval_for_val()
: utility::heap
 
- cover
: basic::sampling::orientations::QuatDBMetadata
 
- coverage
: basic::sampling::orientations::QuaternionGrid
 
- Cp
: Solver
 
- create()
: utility::factory::Factory< typename >
 
- Create
: utility::factory::Factory< typename >
, utility::factory::Registrant< typename >
 
- create()
: utility::tag::Tag
 
- create_all_nested_namespaces()
: binder::Context
 
- create_data()
: basic::datacache::WriteableCacheableDataCreator
 
- create_energy_method()
: test.T850_SubClassing.MyNewCI1B_Creator
 
- create_expression_tree()
: numeric::expression_parser::ExpressionCreator
 
- create_impl()
: basic::MemTracer
, basic::Tracer
 
- create_instance()
: utility::io::GeneralFileManager
 
- create_new_block()
: utility::graph::ArrayPool< T >
 
- create_new_edge()
: utility::graph::Digraph
, utility::graph::Graph
 
- create_new_node()
: utility::graph::Digraph
, utility::graph::Graph
 
- create_residue_from_olc()
: MPDomainAssembly
 
- create_residue_from_resn()
: MPDomainAssembly
 
- create_resource()
: basic::database::DatabaseSessionLoader
, basic::resource_manager::ResourceLoader
, basic::resource_manager::ResourceManager
 
- create_resource_loader()
: basic::database::DatabaseSessionLoaderCreator
, basic::resource_manager::ResourceLoaderCreator
, basic::resource_manager::ResourceLoaderFactory
 
- create_resource_locator()
: basic::resource_manager::locator::DatabaseResourceLocatorCreator
, basic::resource_manager::locator::FileListResourceLocatorCreator
, basic::resource_manager::locator::FileSystemResourceLocatorCreator
, basic::resource_manager::locator::NullResourceLocatorCreator
, basic::resource_manager::ResourceLocatorCreator
, basic::resource_manager::ResourceLocatorFactory
, basic::resource_manager::ResourceManager
 
- create_resource_manager()
: basic::resource_manager::ResourceManagerCreator
 
- create_resource_manager_from_options_system()
: basic::resource_manager::ResourceManagerFactory
 
- create_subelement()
: utility::tag::XMLSchemaComplexTypeGeneratorImpl
 
- create_vertices()
: utility::graph::UpperEdgeGraph< V, E >
 
- CreateASTConsumer()
: BinderFrontendAction
 
- creator_map_
: basic::resource_manager::ResourceLoaderFactory
, basic::resource_manager::ResourceLocatorFactory
 
- CreatorMap
: utility::factory::WidgetFactory< Creator >
 
- CreatorOP
: utility::factory::WidgetFactory< Creator >
 
- CREATOROP
: utility::factory::WidgetRegistrator< FACTORY, CREATOR >
 
- creators()
: utility::factory::WidgetFactory< Creator >
 
- creators_
: utility::factory::WidgetFactory< Creator >
 
- creators_map_
: basic::resource_manager::ResourceManagerFactory
 
- cross
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::KeyFArray1D< typename >
 
- cross_product
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::FArray1D< typename >
, ObjexxFCL::KeyFArray1D< typename >
 
- cs_
: numeric::VoxelArray< _Float, _Value >
 
- CSI_Sequence()
: utility::CSI_Sequence
 
- CSTRING
: fmt::internal::Value
 
- Cstring()
: ObjexxFCL::Cstring
 
- cstyle_A_decomp_
: basic::svd::SVD_Solver
 
- cstyle_b_
: basic::svd::SVD_Solver
 
- cstyle_tmp_
: basic::svd::SVD_Solver
 
- cstyle_v_
: basic::svd::SVD_Solver
 
- cstyle_w_
: basic::svd::SVD_Solver
 
- cstyle_x_
: basic::svd::SVD_Solver
 
- ct_group
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
 
- ct_name
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
 
- ct_naming_func_for_simple_subelements_
: utility::tag::XMLSchemaSimpleSubelementList
 
- ct_ref
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
 
- ct_simple
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
 
- ctype
: options_class.Option
 
- CubicPolynomial()
: numeric::CubicPolynomial
 
- CubicSpline()
: numeric::interpolation::spline::CubicSpline
 
- cumulative_distribution_
: numeric::random::WeightedSampler
 
- cumulative_distribution_valid_
: numeric::random::WeightedSampler
 
- cur_offset_
: utility::graph::LowMemEdgeListConstIter
, utility::graph::LowMemEdgeListIter
 
- cur_transaction_
: utility::sql_database::session
 
- curr_num_in_recent_history()
: utility::recent_history_queue
 
- curr_num_in_recent_history_
: utility::recent_history_queue
 
- curr_pos_
: numeric::expression_parser::TokenSet
, utility::FixedSizeLexicographicalIterator< S >
, utility::LexicographicalIterator
 
- curr_pose_
: PhProtocol
 
- current_callback_object()
: utility::py::PyExitCallback
 
- current_id
: pyrosetta.toolbox.py_jobdistributor.PyJobDistributor
 
- current_in_progress_name
: pyrosetta.toolbox.py_jobdistributor.PyJobDistributor
 
- current_links()
: utility::signals::SignalHub< ResultType, Signal >
 
- current_name
: pyrosetta.toolbox.py_jobdistributor.PyJobDistributor
 
- current_p_
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
 
- currently_sending_
: utility::signals::SignalHub< ResultType, Signal >
 
- custom
: fmt::internal::Value
 
- CUSTOM
: fmt::internal::Value
 
- custom_type_name()
: utility::tag::XMLSchemaType
 
- custom_type_name_
: utility::tag::XMLSchemaType
 
- cut_from_map()
: DockFragmentsMover
 
- cutoff
: numeric::interpolation::spline::LinearFunction
 
- cutpoint
: erraser_option.erraser_option
 
- cutpoint_rs
: erraser_option.erraser_option
 
- Cyan
: basic::Tracer
, basic::TracerImpl
 
- CYS_C
: UBQ_E2Mover
 
- CYS_CA
: UBQ_E2Mover
 
- CYS_CB
: UBQ_E2Mover
 
- CYS_SG
: UBQ_E2Mover