Here is a list of all class members with links to the classes they belong to:
- g -
- G
: Solver
- G_bar
: Solver
- gamma
: Kernel
, svm_parameter
- gap_lengths_
: ScoreFragmentSetMover
- gap_weights_
: ScoreFragmentSetMover
- gaussian()
: numeric::random::RandomGenerator
- gaussian_gset_
: numeric::random::RandomGenerator
- gaussian_iset_
: numeric::random::RandomGenerator
- gcount()
: utility::io::izstream
- ge()
: utility::vectorL_ZeroSelector< bool >
, utility::vectorL_ZeroSelector< false >
- gen()
: utility::keys::KeyLookup< K >
, utility::keys::lookup::gen< K >
- gen_rand_all()
: numeric::random::mt19937_RG
- gen_test_set()
: pyrosetta.tests.protocols.indexed_structure_store.test_search.TestStructureSearch
- GeneralFileContents()
: utility::io::GeneralFileContents
- GeneralFileManager()
: utility::io::GeneralFileManager
- GeneralizedEigenSolver()
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
- generate()
: binder::Context
, BinderVisitor
- generate_prefix_code()
: binder::ClassBinder
- generate_roc_curve()
: numeric::RocCurve
- generateIcosahedralSamples()
: numeric::UniformRotationSampler
- Generator()
: utility::json_spirit::Generator< Value_type, Ostream_type >
- generator_
: numeric::random::RandomGenerator
- genWigner_ds()
: numeric::fourier::SO3coeffs
- get()
: basic::datacache::ConstDataMap
, basic::datacache::DataCache< Data >
, basic::datacache::DataMap
, basic::datacache::HierarchicalDataMap
, binder::Config
, fmt::BasicWriter< Char >
, fmt::BufferedFile
, fmt::ErrorCode
, numeric::AxisRotationSampler
, numeric::UniformRotationSampler
, ObjexxFCL::Fstring
, utility::DenseBoolMap< NUM_ELEMS, BASE_INDEX >
, utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::pointer::DeepCopyOP< T >
, utility::thread::SharedThreadLocalData< T >
- get_all_channels_string()
: basic::Tracer
, basic::TracerImpl
- get_all_derivs()
: numeric::interpolation::spline::PolycubicSpline< N >
, numeric::interpolation::spline::PolycubicSpline< 1 >
, numeric::interpolation::spline::PolycubicSpline< 2 >
- get_allocator()
: fmt::internal::MemoryBuffer< T, SIZE, Allocator >
- get_alternative_search_paths()
: utility::io::izstream
- get_arg()
: fmt::BasicFormatter< CharType, ArgFormatter >
, fmt::internal::FormatterBase
- get_argv()
: utility::options::OptionCollection
- get_array()
: utility::json_spirit::Value_impl< Config >
- get_atom_sasa_cutoff()
: BacksideHbondFinderMover
- get_bool()
: utility::json_spirit::Value_impl< Config >
- get_C()
: Solver
- get_chunk_size()
: utility::sql_database::session
- get_col()
: numeric::MathMatrix< T >
- get_column_name()
: basic::database::insert_statement_generator::RowDataBase
- get_command_lines()
: mutant_modeler.MutantModeler
- get_component_doc()
: pyrosetta.distributed.docs.InlineDocs
- get_const_ptr()
: basic::datacache::DataCache< Data >
- get_crc()
: utility::io::izstream
, utility::io::ozstream
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- get_data()
: Cache
- get_db_mode()
: utility::sql_database::session
- get_db_name()
: utility::sql_database::session
- get_db_partition()
: utility::sql_database::session
- get_db_session()
: utility::sql_database::DatabaseSessionManager
- get_delta()
: numeric::interpolation::spline::CubicSpline
- get_deriv()
: numeric::interpolation::spline::PolycubicSpline< N >
, numeric::interpolation::spline::PolycubicSpline< 1 >
, numeric::interpolation::spline::PolycubicSpline< 2 >
- get_dsecox()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CubicSpline
, numeric::interpolation::spline::TricubicSpline
- get_dsecoxy()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::TricubicSpline
- get_dsecoxyz()
: numeric::interpolation::spline::TricubicSpline
- get_dsecoxz()
: numeric::interpolation::spline::TricubicSpline
- get_dsecoy()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::TricubicSpline
- get_dsecoyz()
: numeric::interpolation::spline::TricubicSpline
- get_dsecoz()
: numeric::interpolation::spline::TricubicSpline
- get_edge()
: utility::graph::UEVertex< V, E >
, utility::graph::UpperEdgeGraph< V, E >
- get_edge_exists()
: utility::graph::Digraph
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
- get_file_contents()
: utility::io::FileContentsMap
, utility::io::GeneralFileContents
, utility::io::GeneralFileManager
- get_file_contents_ref()
: utility::io::FileContentsMap
- get_first_node_ind()
: utility::graph::Edge
, utility::graph::LowMemEdge
- get_gzip_crc()
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- get_gzip_data_size()
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- get_head_node()
: utility::graph::DirectedEdge
- get_head_node_ind()
: utility::graph::DirectedEdge
- get_high_res_command_lines()
: mutant_modeler.MutantModeler
- get_in_size()
: utility::io::izstream
, utility::io::ozstream
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- get_indices()
: numeric::interpolation::InterpolatedPotential< N >
- get_instance()
: utility::SingletonBase< T >
, utility::thread::SharedThreadLocalData< T >
- get_int()
: utility::json_spirit::Value_impl< Config >
- get_int64()
: utility::json_spirit::Value_impl< Config >
- get_interpolator()
: numeric::interpolation::spline::SplineGenerator
- get_istream()
: utility::Inline_File_Provider
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- get_lb_function_cutoff()
: numeric::interpolation::spline::Interpolator
- get_lbdy()
: numeric::interpolation::spline::SplineGenerator
- get_lbx()
: numeric::interpolation::spline::SplineGenerator
- get_lby()
: numeric::interpolation::spline::SplineGenerator
- get_listener()
: basic::mpi::MessageListenerFactory
- get_local_zn_coords()
: zinc_stats::ZincStatisticGenerator
- get_local_zn_positions_for_residue()
: zinc_stats::ZincStatisticGenerator
- get_low_res_command_lines()
: mutant_modeler.MutantModeler
- get_mathmatrix()
: numeric::MathNTensor< T, N >
- get_med_res_command_lines()
: mutant_modeler.MutantModeler
- get_mut_positions()
: mutant_modeler.MutantModeler
- get_name()
: AnchorFinderMover
, APDBCMover
, BacksideHbondFinderMover
, CaToAllAtom
, ConsensusFragmentMover
, DockFragmentsMover
, DockGlycansProtocol
, DougsDockDesignMinimizeMagicMover
, DummyMover
, ExemplarMover
, ExposedStrandMover
, ExtractATD
, FitMover
, FragmentAssemblyMover
, HbsDesignMover
, HDdesignMover
, HDmakerMover
, IAMover
, IdentifyCDRClusters
, LigandDockBench
, MetalSiteFinderMover
, Minimize
, MPDomainAssembly
, MyScoreMover
, NCMinimize
, OopDesignMover
, PackingAngle
, PeptoidDesignMover
, PhProtocol
, RmsfMover
, ScoreFragmentSetMover
, SolutionRescoreMover
, supercharge
, test.T850_SubClassing.My_New_Mover
, test.Workshop9_my_shapes.PhiNByXDegreesMover
, UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
, utility::json_spirit::Config_map< String >
, utility::json_spirit::Config_vector< String >
, ViewMembraneProteinMover
, zinc1_homodimer_design
, zinc1_homodimer_setup
, zinc2_homodimer_design
, zinc2_homodimer_setup
- get_namespace()
: options_class.Option
- get_native_pose()
: RNA_DeNovoJobQueen
- get_neighbor_distance_cutoff()
: BacksideHbondFinderMover
- get_net_charge()
: supercharge
- get_next_size()
: boost::unordered_object_pool< T, UserAllocator >
- get_node()
: utility::graph::Digraph
, utility::graph::DirectedEdge
, utility::graph::Edge
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
, utility::graph::LowMemGraphBase
- get_node_index()
: utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::LowMemNode
, utility::graph::Node
- get_nr_class()
: utility::libsvm::Svm_rosetta
- get_num_edges_to_larger_indexed_nodes()
: utility::graph::Node
- get_num_edges_to_smaller_indexed_nodes()
: utility::graph::Node
- get_num_points()
: numeric::interpolation::spline::SplineGenerator
- get_number_cols()
: numeric::MathMatrix< T >
- get_number_elements()
: numeric::MathMatrix< T >
- get_number_rows()
: numeric::MathMatrix< T >
- get_obj()
: utility::json_spirit::Value_impl< Config >
- get_op()
: utility::pointer::DeepCopyOP< T >
- get_open_mode()
: basic::resource_manager::locator::FileListResourceLocator
, basic::resource_manager::locator::FileSystemResourceLocator
- get_or_null()
: basic::datacache::HierarchicalDataMap
- get_ostream()
: utility::Inline_File_Provider
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- get_other_ind()
: utility::graph::DirectedEdge
, utility::graph::Edge
, utility::graph::LowMemEdge
- get_other_node()
: utility::graph::DirectedEdge
, utility::graph::Edge
, utility::graph::LowMemEdge
- get_out_size()
: utility::io::izstream
, utility::io::ozstream
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- get_owner()
: utility::graph::DirectedEdge
, utility::graph::DirectedNode
, utility::graph::Edge
, utility::graph::Node
- get_pq_schema()
: utility::sql_database::session
- get_proxy_by_priority()
: basic::TracerImpl
- get_ptr()
: basic::datacache::ConstDataMap
, basic::datacache::DataCache< Data >
, basic::datacache::DataMap
- get_Q()
: Kernel
, ONE_CLASS_Q
, QMatrix
, SVC_Q
, SVR_Q
- get_QD()
: Kernel
, ONE_CLASS_Q
, QMatrix
, SVC_Q
, SVR_Q
- get_raw_const_ptr()
: basic::datacache::DataCache< Data >
- get_raw_ptr()
: basic::datacache::DataCache< Data >
- get_real()
: utility::json_spirit::Value_impl< Config >
- get_resource()
: basic::datacache::DataMap
, basic::resource_manager::ResourceManager
- get_row()
: numeric::MathMatrix< T >
- get_second_node_ind()
: utility::graph::Edge
, utility::graph::LowMemEdge
- get_seed()
: numeric::random::RandomGenerator
- get_self_ptr()
: basic::datacache::CacheableData
, utility::graph::Digraph
, utility::graph::Graph
, utility::tag::Tag
, utility::tag::XMLSchemaRepeatableCTNode
- get_self_weak_ptr()
: basic::datacache::CacheableData
, utility::tag::Tag
, utility::tag::XMLSchemaRepeatableCTNode
- get_session_mysql()
: utility::sql_database::DatabaseSessionManager
- get_session_postgres()
: utility::sql_database::DatabaseSessionManager
- get_session_sqlite3()
: utility::sql_database::DatabaseSessionManager
- get_sidechains_mover_
: HDdesignMover
- get_sstream()
: utility::Inline_File_Provider
- get_start()
: numeric::interpolation::spline::CubicSpline
- get_static_int()
: utility::py::PyExitCallback
- get_static_string()
: utility::py::PyExitCallback
- get_static_string_const()
: utility::py::PyExitCallback
- get_str()
: utility::json_spirit::Value_impl< Config >
- get_svd_solution()
: basic::svd::SVD_Solver
- get_tail_node()
: utility::graph::DirectedEdge
- get_tail_node_ind()
: utility::graph::DirectedEdge
- get_transaction_mode()
: utility::sql_database::session
- get_ub_function_cutoff()
: numeric::interpolation::spline::Interpolator
- get_ubdy()
: numeric::interpolation::spline::SplineGenerator
- get_ubx()
: numeric::interpolation::spline::SplineGenerator
- get_uby()
: numeric::interpolation::spline::SplineGenerator
- get_uint64()
: utility::json_spirit::Value_impl< Config >
- get_value()
: utility::json_spirit::Config_map< String >
, utility::json_spirit::Config_vector< String >
, utility::json_spirit::Value_impl< Config >
- get_values()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CubicSpline
- get_variable()
: numeric::expression_parser::SimpleExpressionCreator
- get_vertex()
: utility::graph::UpperEdgeGraph< V, E >
- get_vertex_ptr()
: utility::graph::UpperEdgeGraph< V, E >
- get_zerr()
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- get_zip_stream()
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- GetBoundingBox()
: numeric::VoxelGrid< typename >
- getCName()
: options_class.Option
- GetDimension()
: numeric::VoxelGrid< typename >
- getDoxygenRow()
: options_class.Option
- GetGridItems()
: numeric::VoxelGrid< typename >
- GetIndex()
: numeric::VoxelGrid< typename >
- getline
: ObjexxFCL::Fstring
, utility::io::icstream
, utility::io::irstream
, utility::io::izstream
- getMarkdownRow()
: options_class.Option
- getName()
: utility::tag::Tag
- GetNeighbors()
: numeric::VoxelGrid< typename >
- GetNeighbors1D()
: numeric::VoxelGrid< typename >
- GetNeighborsIn()
: numeric::VoxelGrid< typename >
- GetNeighborsMultiDimensional()
: numeric::VoxelGrid< typename >
- GetNumberItems()
: numeric::VoxelGrid< typename >
- getOneReport()
: PerformanceBenchmark
- getOption()
: utility::tag::Tag
- getOptionCC()
: options_class.Option
- getOptionKeysCC()
: options_class.Option
- getOptionKeysHH()
: options_class.Option
- getOptions()
: utility::tag::Tag
- getParent()
: utility::tag::Tag
- GetPaths()
: utility::graph::RingDetection< Graph >
- getRandom()
: numeric::random::mt19937_RG
, numeric::random::standard_RG
, numeric::random::uniform_RG
- getReport()
: PerformanceBenchmark
- GetResolution()
: numeric::VoxelGrid< typename >
- GetRings()
: utility::graph::RingDetection< Graph >
- getSeed()
: numeric::random::mt19937_RG
, numeric::random::standard_RG
, numeric::random::uniform_RG
- GetSqDistanceOutsideBoundingBox()
: numeric::VoxelGrid< typename >
- getTag()
: utility::tag::Tag
- getTags()
: utility::tag::Tag
- getter
: pyrosetta.distributed.utility.log.classproperty
- GetTime()
: basic::gpu::Timer
- getTotalMemoryUsage()
: utility::graph::Digraph
, utility::graph::Graph
, utility::graph::LowMemGraph< _Node, _Edge >
- getWikiTableRow()
: options_class.Option
- global_exit_callback()
: utility::py::PyExitCallback
- global_insertion_operator()
: binder::Context
- GLY2_C
: UBQ_E2Mover
- GLY_C
: UBQ_E2Mover
- GLY_CA
: UBQ_E2Mover
- GLY_N
: UBQ_E2Mover
- good()
: utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
- grandparent
: numeric::expression_parser::BooleanExpressionCreator
- Graph
: ObjexxFCL::internal::ObserverGraph
, utility::graph::Graph
- graph_
: ObjexxFCL::internal::ObserverGraph
, utility::graph::LowMemEdgeListConstIter
, utility::graph::LowMemEdgeListIter
- graph_size_
: utility::graph::RingDetection< Graph >
- GraphClass
: utility::graph::UEEdge< V, E >
, utility::graph::UEVertex< V, E >
- gray_target()
: utility::graph::null_bfs_prune_visitor
, utility::graph::RingSizeVisitor< Graph, DistanceMap, LabelMap >
- GreaterThanConstraint()
: basic::database::schema_generator::GreaterThanConstraint
- Green
: basic::Tracer
, basic::TracerImpl
- grid_atoms()
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- grid_atoms_
: numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- grid_balls_
: numeric::geometry::hashing::xyzStripeHash
- grid_resolution_
: numeric::geometry::hashing::MinimalClashHash
- grid_size()
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
, numeric::interpolation::InterpolatedPotential< N >
- grid_size2()
: numeric::geometry::hashing::xyzStripeHash
- grid_size2_
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- grid_size_
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
, numeric::interpolation::InterpolatedPotential< N >
- grid_stripe()
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- grid_stripe_
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- gridpoints_
: numeric::interpolation::InterpolatedPotential< N >
- grids_
: basic::sampling::orientations::QuaternionGridManager
- gridsearch_rollmove_angles()
: zinc1_homodimer_design
- gridsearch_rollmove_angles_
: zinc1_homodimer_design
- gridsearch_symmetric_alignments()
: zinc2_homodimer_setup
- group
: options_class.Option
- group_name()
: utility::tag::XMLSchemaModelGroup
- group_name_
: utility::tag::XMLSchemaModelGroup
- grow()
: fmt::Buffer< T >
, fmt::internal::FixedBuffer< Char >
, fmt::internal::MemoryBuffer< T, SIZE, Allocator >
- grow_buffer()
: fmt::BasicWriter< Char >
- GT_Expression()
: numeric::expression_parser::GT_Expression
- GTE_Expression()
: numeric::expression_parser::GTE_Expression
- gtol
: numeric::nls::lm_control_struct
- GTPase_cyd_
: UBQ_GTPase_disulfide_Mover
- guarantee_no_DNA
: erraser_option.erraser_option
- GZIP
: utility::io::izstream
, utility::io::ozstream
- gzipped()
: utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream