Here is a list of all class members with links to the classes they belong to:
- t -
- T
: binder::ConstructorBindingInfo
- t()
: numeric::BodyPosition< typename >
, numeric::xyzTransform< typename >
- T
: ObjexxFCL::ChunkExponent
- T6
: numeric::xyzTransform< typename >
- t_
: basic::gpu::Timer
, numeric::BodyPosition< typename >
, ObjexxFCL::format::Bite< T >
- t_DataType
: numeric::VoxelGrid< typename >
- t_DataTypeCOPtrPair
: numeric::VoxelGrid< typename >
- t_DataTypeVectorCOPtrPair
: numeric::VoxelGrid< typename >
- t_flush()
: basic::basic_otstream< CharT, Traits >
, basic::ComparingTracer
, basic::MemTracerImpl
, basic::PyTracer
, basic::TracerImpl
, basic::TracerImpl::TracerProxyImpl
, basic::TracerToFile
- t_pointer
: A
- t_str()
: ObjexxFCL::Fstring
- t_value
: A
- tab_prefixed()
: utility::options::OptionCollection
- table_init_statements()
: basic::database::schema_generator::Schema
- table_name_
: basic::database::insert_statement_generator::InsertGenerator
, basic::database::schema_generator::Schema
- table_schema_statements()
: basic::database::schema_generator::Schema
- tag()
: numeric::RocPoint
, pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask
- Tag()
: utility::tag::Tag
- tag_
: basic::DynamicProfileThis
, basic::gpu::Timer
, basic::ProfileThis
, CAtrace
, FragID
, FragInfo
, numeric::RocPoint
- tag_is_done_
: RNA_DeNovoJobQueen
- tags()
: pyrosetta.io.silent_file_map.SilentFileMap
- tags_t
: utility::tag::Tag
- tail()
: ObjexxFCL::Fstring
, utility::in_place_list< T >
- tail_
: utility::in_place_list< T >
- target
: APDBCMover
- target_atoms
: pyrosetta.protocols.structure_search.StructureSearchManager
- target_atr_
: DockGlycansProtocol
- target_rep_
: DockGlycansProtocol
- task_
: HPatchByChainNPDCalculator
, InteractionGraphPerformanceBenchmark
, NBuriedUnsatsCalcultor
- task_constraint_setup()
: HDdesignMover
- task_design_
: HDdesignMover
- task_factory_
: UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
- taskfactory_
: zinc1_homodimer_design
, zinc2_homodimer_design
- tearDown()
: DatabaseIOBenchmark
, DesignBenchmark
, DockingBenchmark< dock, TScale >
, FastRelaxPerformanceBenchmark
, InteractionGraphPerformanceBenchmark
, LigandDockBenchmark
, LigandDockScriptBenchmark
, MinimizerBenchmark< sft, TScale >
, OptionCollectionBenchmark
, PDB_IOBenchmark
, PerformanceBenchmark
, pyrosetta.tests.distributed.test_dask.TestDaskDistribution
, ResidueTypeBenchmark
, ScoreBenchmark
, ScoreEachBenchmark
, ShearMoverBenchmark
, SmallMoverBenchmark
, XMLParseBenchmark
- temp_
: myMC
- term
: numeric::CalculatorParser
- test_basic()
: pyrosetta.tests.distributed.test_dask.TestDaskDistribution
- test_concurrent_multi_task()
: pyrosetta.tests.distributed.test_concurrency.TestConcurrentScripts
- test_concurrent_on_task()
: pyrosetta.tests.distributed.test_concurrency.TestConcurrentScripts
- test_concurrent_score()
: pyrosetta.tests.distributed.test_concurrency.TestConcurrentScripts
- test_feature_
: DatabaseIOBenchmark
- test_gil_score()
: pyrosetta.tests.distributed.test_gil.TestGIL
- test_gil_sleep()
: pyrosetta.tests.distributed.test_gil.TestGIL
- test_labels()
: pyrosetta.tests.bindings.core.test_pose.TestPoseResidueLabelAccessor
- test_move()
: ExemplarMover
, Minimize
, NCMinimize
- test_my_struct()
: testers::test_my_struct
- test_p()
: test.T850_SubClassing.PyOverloadTest
, utility::py::OverloadTest
- test_pair_search()
: pyrosetta.tests.protocols.indexed_structure_store.test_search.TestStructureSearch
- test_poses_to_silent()
: pyrosetta.tests.bindings.core.test_pose.TestPosesToSilent
- test_ref()
: test.T850_SubClassing.PyOverloadTest
, utility::py::OverloadTest
- test_rep_search()
: pyrosetta.tests.protocols.indexed_structure_store.test_search.TestStructureSearch
- test_residues()
: pyrosetta.tests.bindings.core.test_pose.TestPoseResidueAccessor
- test_rmsd_calc()
: pyrosetta.tests.numeric.test_alignment.TestAlignment
- test_rosetta_scripts()
: pyrosetta.tests.distributed.test_dask.TestDaskDistribution
- test_score_smoke_test()
: pyrosetta.tests.distributed.test_smoke.SmokeTestDistributed
- test_scores()
: pyrosetta.tests.bindings.core.test_pose.TestPoseScoresAccessor
- test_silent_io()
: pyrosetta.tests.distributed.test_smoke.SmokeTestDistributed
- test_single_search()
: pyrosetta.tests.protocols.indexed_structure_store.test_search.TestStructureSearch
- test_superimpose()
: pyrosetta.tests.numeric.test_alignment.TestAlignment
- test_update_score()
: pyrosetta.tests.distributed.test_smoke.SmokeTestDistributed
- test_worker_extra()
: pyrosetta.tests.distributed.test_dask_worker.TestDaskArgs
- text_
: basic::Report
- tf_design_
: HDdesignMover
- then_expression()
: numeric::expression_parser::ITEExpression
- then_expression_
: numeric::expression_parser::ITEExpression
- theta()
: numeric::EulerAngles< typename >
, numeric::sphericalVector< typename >
- theta_
: numeric::AxisRotationSampler
, numeric::sphericalVector< typename >
, numeric::UniformRotationSampler
- theta_degrees()
: numeric::EulerAngles< typename >
- theta_radians()
: numeric::EulerAngles< typename >
- thioester_mm_
: UBQ_E2Mover
- THIS
: numeric::VoxelArray< _Float, _Value >
, utility::graph::LowMemGraph< _Node, _Edge >
- this_weak_ptr_
: numeric::ClusteringTreeNode
- ThousandsSep()
: fmt::internal::ThousandsSep
- thread
: utility::thread::SharedThreadLocalData< T >
- throw_not_array()
: utility::json_spirit::Json_grammer< Value_type, Iter_type >
- throw_not_colon()
: utility::json_spirit::Json_grammer< Value_type, Iter_type >
- throw_not_object()
: utility::json_spirit::Json_grammer< Value_type, Iter_type >
- throw_not_pair()
: utility::json_spirit::Json_grammer< Value_type, Iter_type >
- throw_not_string()
: utility::json_spirit::Json_grammer< Value_type, Iter_type >
- throw_not_value()
: utility::json_spirit::Json_grammer< Value_type, Iter_type >
- throw_on_double_registration_
: basic::resource_manager::ResourceLoaderFactory
, basic::resource_manager::ResourceLocatorFactory
- tick()
: pyrosetta.tests.distributed.test_gil.HeartBeat
- time_
: PerformanceBenchmark
- Timer()
: basic::gpu::Timer
- Times()
: basic::sampling::orientations::Quaternion
- timestamp
: basic::TracerOptions
- titrate_pH()
: PhProtocol
- titration_successful_
: PhProtocol
- tmpbuf()
: numeric::fourier::kiss_dct_state
, numeric::fourier::kiss_fftnd_state
, numeric::fourier::kiss_fftndr_state
, numeric::fourier::kiss_fftr_state
, numeric::fourier::kiss_fftsplit_state
- tmpbuf_
: numeric::fourier::kiss_dct_state
, numeric::fourier::kiss_fftnd_state
, numeric::fourier::kiss_fftndr_state
, numeric::fourier::kiss_fftr_state
, numeric::fourier::kiss_fftsplit_state
- tmpdb_
: MPDomainAssembly
- to_bare_name()
: utility::file::FileName
- to_default()
: ObjexxFCL::FArray1< typename >
, ObjexxFCL::FArray2< typename >
, ObjexxFCL::FArray3< typename >
, ObjexxFCL::FArray4< typename >
, ObjexxFCL::FArray5< typename >
, ObjexxFCL::FArray6< typename >
, ObjexxFCL::FArray< typename >
, utility::options::Option
, utility::options::ScalarOption
, utility::options::ScalarOption_T_< K, T >
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
- to_diag()
: numeric::xyzMatrix< typename >
, ObjexxFCL::FArray2< typename >
- to_identity()
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, numeric::xyzMatrix< typename >
, ObjexxFCL::FArray2< typename >
- to_local_coordinate()
: numeric::HomogeneousTransform< T >
- to_local_name()
: utility::file::FileName
- to_quaternion()
: numeric::xyzTransform< typename >
- to_rotation_matrix()
: numeric::EulerAngles< typename >
- to_string()
: fmt::BasicStringRef< Char >
, numeric::expression_parser::FunctionToken
, numeric::expression_parser::LiteralToken
, numeric::expression_parser::SimpleToken
, numeric::expression_parser::Token
, numeric::expression_parser::VariableToken
, numeric::interpolation::Histogram< typename, typename >
, numeric::kdtree::KDPoint
, numeric::Quaternion< typename >
, numeric::xyzVector< typename >
, utility::tag::Tag
- to_zero()
: ObjexxFCL::FArray< typename >
- TokenHub()
: utility::signals::TokenHub< ResultType, Signal >
- tokens_
: numeric::expression_parser::TokenSet
, utility::signals::TokenHub< ResultType, Signal >
- TokenSet()
: numeric::expression_parser::TokenSet
- tol
: pep_coord_cst
- tolerance()
: numeric::NumericTraits< double >
, numeric::NumericTraits< float >
, numeric::NumericTraits< long double >
- top()
: numeric::expression_parser::TokenSet
- top_level_elements_
: utility::tag::XMLSchemaDefinition
- torsion_minimizer_
: DockGlycansProtocol
- torsion_mm_
: DockGlycansProtocol
- total
: pyrosetta.distributed.utility.log.ProgressLogger
- total_counts()
: numeric::MultiDimensionalHistogram
- total_counts_
: numeric::MultiDimensionalHistogram
- Trace
: basic::Tracer
, basic::TracerImpl
- trace()
: numeric::xyzMatrix< typename >
- trace_counter
: binder::Context
- trace_line()
: binder::Context
- Tracer()
: basic::Tracer
- tracer_
: basic::Tracer::TracerProxy
, basic::TracerImpl::TracerProxyImpl
- tracer_impl()
: basic::Tracer
- tracer_options_
: basic::TracerImpl
- tracer_proxy_impl()
: basic::Tracer::TracerProxy
- TracerImpl()
: basic::TracerImpl
- TracerProxy()
: basic::Tracer::TracerProxy
- TracerProxyImpl()
: basic::TracerImpl::TracerProxyImpl
- TracerToFile()
: basic::TracerToFile
- train()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CubicSpline
, numeric::interpolation::spline::PolycubicSpline< N >
, numeric::interpolation::spline::PolycubicSpline< 1 >
, numeric::interpolation::spline::PolycubicSpline< 2 >
, numeric::interpolation::spline::TricubicSpline
- Traits
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, ObjexxFCL::FArray< typename >
, ObjexxFCL::FArrayInitializer< typename, class >
- traits_type
: ObjexxFCL::FArrayTraits< typename >
, ObjexxFCL::FArrayTraits< numeric::xyzVector< T > >
, ObjexxFCL::TypeTraits< T >
, ObjexxFCL::TypeTraits< double >
, ObjexxFCL::TypeTraits< float >
, ObjexxFCL::TypeTraits< int >
, ObjexxFCL::TypeTraits< long double >
, ObjexxFCL::TypeTraits< long int >
, ObjexxFCL::TypeTraits< short int >
, ObjexxFCL::TypeTraits< unsigned int >
, ObjexxFCL::TypeTraits< unsigned long int >
, ObjexxFCL::TypeTraits< unsigned short int >
, utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- trajectory_fname_
: InteractionGraphPerformanceBenchmark
- trampoline
: binder::ConstructorBindingInfo
- trampoline_qualified_name
: binder::ConstructorBindingInfo
- trans_
: DockGlycansProtocol
- transaction()
: utility::sql_database::transaction
- transaction_counter_
: utility::sql_database::session
- transaction_mode_
: utility::sql_database::session
- transform()
: numeric::BodyPosition< typename >
- Transform
: numeric::xyzTransform< typename >
- transformed()
: numeric::BodyPosition< typename >
- translate()
: numeric::geometry::BoundingBox< typename >
- Translate()
: numeric::VoxelGrid< typename >
- translate_info_
: LigandDockBench
- Translation
: numeric::BodyPosition< typename >
- translation()
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- translation_
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- translation_real()
: numeric::geometry::hashing::xyzStripeHash
- transpose()
: numeric::MathMatrix< T >
, numeric::xyzMatrix< typename >
, ObjexxFCL::FArray2< typename >
- transpose_product
: numeric::xyzMatrix< typename >
, numeric::xyzVector< typename >
- transposed()
: numeric::xyzMatrix< typename >
, ObjexxFCL::FArray2D< typename >
, ObjexxFCL::KeyFArray2D< typename >
- transposeRowSize()
: numeric::fourier::SO3coeffs
- treat_AND_and_OR_as_operators()
: numeric::expression_parser::ArithmeticScanner
- treat_AND_and_OR_as_operators_
: numeric::expression_parser::ArithmeticScanner
- tree()
: numeric::kdtree::KDNode
- tree_
: numeric::kdtree::KDNode
- tree_edge()
: utility::graph::null_bfs_prune_visitor
, utility::graph::RingEdgeAnnotationVisitor< Graph, EdgeMap, PathMap >
, utility::graph::RingSizeVisitor< Graph, DistanceMap, LabelMap >
- tree_init()
: numeric::geometry::hashing::SixDCoordinateBinner
- TricubicSpline()
: numeric::interpolation::spline::TricubicSpline
- trim()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, utility::options::OptionCollection
- trim_whitespace()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- trimmed()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, utility::options::OptionCollection
- trimmed_whitespace()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- trimmed_whitespace_range()
: ObjexxFCL::Fstring
- Triple()
: basic::sampling::orientations::Triple
- true_negative_count_
: numeric::RocCurve
- true_positive_count_
: numeric::RocCurve
- twiddles()
: numeric::fourier::kiss_fft_state
- twiddles_
: numeric::fourier::kiss_fft_state
- two()
: numeric::NumericTraits< T >
, numeric::NumericTraits< double >
, numeric::NumericTraits< float >
, numeric::NumericTraits< long double >
- two_ubiquitins_
: UBQ_E2Mover
- TwoDHistogram()
: numeric::histograms::TwoDHistogram< key1, key2 >
- type()
: basic::database::DatabaseSessionOptions
, basic::resource_manager::locator::DatabaseResourceLocator
, basic::resource_manager::locator::FileListResourceLocator
, basic::resource_manager::locator::FileSystemResourceLocator
, basic::resource_manager::locator::NullResourceLocator
, basic::resource_manager::ResourceLocator
, fmt::AlignTypeSpec< TYPE >
, fmt::ArgList
, fmt::FormatSpec
, fmt::internal::Arg
- Type
: fmt::internal::ArgArray< N, false >
, fmt::internal::ArgArray< N, true >
- type
: fmt::internal::ArgType
, fmt::internal::Conditional< B, T, F >
, fmt::internal::Conditional< false, T, F >
, fmt::internal::EnableIf< true, T >
- Type
: fmt::internal::MakeUnsigned< T >
- type()
: fmt::internal::MakeValue< Formatter >
- Type
: fmt::internal::TypeSelector< FitsIn32Bits >
, fmt::internal::TypeSelector< false >
, fmt::internal::Value
- type()
: fmt::TypeSpec< TYPE >
, numeric::expression_parser::FunctionToken
, numeric::expression_parser::LiteralToken
, numeric::expression_parser::SimpleToken
, numeric::expression_parser::Token
, numeric::expression_parser::VariableToken
- Type
: numeric::interpolation::HistogramAP< X, Y >
, numeric::interpolation::HistogramCAP< X, Y >
, numeric::interpolation::HistogramCOP< X, Y >
, numeric::interpolation::HistogramOP< X, Y >
, numeric::IOTraits< T >
, numeric::IOTraits< double >
, numeric::IOTraits< float >
, numeric::IOTraits< int >
, numeric::IOTraits< long double >
, numeric::IOTraits< long int >
, numeric::IOTraits< short int >
, numeric::IOTraits< unsigned int >
, numeric::IOTraits< unsigned long int >
, numeric::IOTraits< unsigned short int >
, numeric::NumericTraits< T >
, numeric::NumericTraits< double >
, numeric::NumericTraits< float >
, numeric::NumericTraits< long double >
- type()
: utility::json_spirit::Value_impl< Config >
, utility::tag::XMLSchemaAttribute
, utility::tag::XMLSchemaModelGroup
, utility::tag::XMLSchemaType
- type_
: basic::database::schema_generator::Column
, fmt::FormatSpec
, numeric::expression_parser::SimpleToken
, utility::tag::XMLSchemaAttribute
, utility::tag::XMLSchemaModelGroup
, utility::tag::XMLSchemaType
- type_name()
: utility::tag::XMLSchemaElement
, utility::tag::XMLSchemaType
- type_name_
: utility::tag::XMLSchemaElement
- type_of()
: ObjexxFCL::Fstring
- type_prefix()
: fmt::AlignTypeSpec< TYPE >
, fmt::FormatSpec
, fmt::TypeSpec< TYPE >
- type_string()
: utility::options::AnyOption< T >
, utility::options::AnyVectorOption< T >
, utility::options::BooleanOption
, utility::options::BooleanVectorOption
, utility::options::FileOption
, utility::options::FileVectorOption
, utility::options::IntegerOption
, utility::options::IntegerVectorOption
, utility::options::Option
, utility::options::PathOption
, utility::options::PathVectorOption
, utility::options::RealOption
, utility::options::RealVectorOption
, utility::options::ResidueChainVectorOption
, utility::options::StringOption
, utility::options::StringVectorOption
- type_string_
: basic::database::schema_generator::DbDataType
- types
: binder::Context
, fmt::ArgList
- types_
: fmt::ArgList