- o -

• o2prime_packer() : swa_rna_util.cc
• O_annotate_includes() : binder.cpp
• O_bind() : binder.cpp
• O_config() : binder.cpp
• O_max_file_size() : binder.cpp
• O_prefix() : binder.cpp
• O_root_module() : binder.cpp
• O_single_file() : binder.cpp
• O_skip() : binder.cpp
• O_trace() : binder.cpp
• O_verbose() : binder.cpp
• obtain_start_pose() : erraser2.cc
• operator<() : denovo_density.cc
• OPT_1GRP_KEY() : calibur.cc
• optimize_embedding() : helix_from_sequence.cc
• optimize_pose() : minimize_with_cst.cc
• output_canonical_base_pair_steps() : rna_database.cc
• output_general_base_pair_steps() : rna_database.cc
• output_packstat() : packstat.cc
• output_packstat_pdb() : packstat.cc
• OUTPUT_PATH() : test_explicit_membrane_input.cc
• output_residue_struct() : swa_rna_util.cc
• output_results() : ResidueDisorder.cc
• output_score() : test_carbohydrate_scoring.cc
• output_seq_with_residue_emphasis() : build_full_model.cc
• output_single_motif() : extract_motifs.cc
• output_superimposed_pdb() : rna_graft.cc