karen_compare_pocket_rmsd.cc File Reference

#include <iostream>
#include <core/pose/Pose.hh>
#include <core/conformation/Residue.hh>
#include <devel/init.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/Tracer.hh>
#include <core/scoring/rms_util.hh>
#include <string>
#include <core/import_pose/import_pose.hh>
#include <fstream>

Functions
bool	is_interface_heavyatom (core::pose::Pose const &pose, core::pose::Pose const &, core::Size resno, core::Size atomno)
int	main (int argc, char *argv[])
	General testing code. More...

Variables
static basic::Tracer	TR ("apps.pilot.karen_compare_pocket_rmsd.main")
std::set< std::string >	interface
core::Size	lig_res_num

Function Documentation

is_interface_heavyatom()

bool is_interface_heavyatom	(	core::pose::Pose const &	pose,
		core::pose::Pose const &	,
		core::Size	resno,
		core::Size	atomno
	)

References interface, and beta_nonlocal::pose.

Referenced by main().

main()

int main	(	int	argc,
		char *	argv[]
	)

General testing code.

References argv, utility::io::oc::cout, test.T009_Exceptions::e, assign_charges::ifs, basic::options::OptionKeys::in::in, basic::init(), interface, is_interface_heavyatom(), NEW_OPT, option, test.T008_Serialization::pose1, test.T008_Serialization::pose2, pyrosetta.distributed.io::pose_from_file(), and TR.

Variable Documentation

interface

std::set<std::string> interface

Referenced by InterfaceHitDatabase::add_interface(), Packing_energies::apply(), SSM_energies::apply(), CrystDesign::apply(), complex_interface_optimize::apply(), compute_Irmsd::apply(), benchmark_contacts(), calc_B_values(), design(), CrystDesign::design_cycle(), design_homodimer(), dna_motif_matcher(), get_interface_residues(), CrystDesign::get_interface_residues(), interface_repack_test(), is_interface_heavyatom(), main(), MPframeworkTest1Mover::move_together(), output_interface_graphviz(), region_for_string(), setup_docking_ft_with_randomization(), CalcIrms::setup_native(), spec_test(), and zif268_test().

lig_res_num

core::Size lig_res_num

Referenced by define_interface(), and main().

TR

basic::Tracer TR("apps.pilot.karen_compare_pocket_rmsd.main") ( "apps.pilot.karen_compare_pocket_rmsd.main"  )

static

Referenced by main().