rsd_canonical_units.cc File Reference

#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/gpu.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/options/util.hh>
#include <basic/Tracer.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/orbitals/OrbitalType.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/util.hh>
#include <core/chemical/VariantType.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/import_pose/import_pose.hh>
#include <devel/init.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/io/silent/ScoreFileSilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/Stub.hh>
#include <core/kinematics/RT.hh>
#include <core/pack/optimizeH.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/RotamerSampleOptions.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoringManager.hh>
#include <core/util/SwitchResidueTypeSet.hh>
#include <numeric/conversions.hh>
#include <numeric/model_quality/rms.hh>
#include <numeric/random/random.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyz.io.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <protocols/scoring/ImplicitFastClashCheck.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <sstream>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <apps/pilot/will/will_util.ihh>
#include <apps/pilot/will/mynamespaces.ihh>

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("rsd_canonical_units")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References aa, angle_degrees(), argv, basic::options::OptionKeys::chemical::chemical, utility::io::oc::cout, numeric::xyzVector< T >::dot(), test.T009_Exceptions::e, ObjexxFCL::format::F(), basic::options::OptionKeys::optE::fixed, create_a3b_hbs::i, basic::init(), subloop_histogram::iterator, ObjexxFCL::format::LJ(), numeric::xyzVector< T >::normalized(), test.T850_SubClassing::ot, kmeans_adaptive_kernel_density_bb_dependent_rotlib::p, p2, numeric::rotation_axis(), beta_sc_scan::seq, str(), ObjexxFCL::strip(), predPRE::t, utility_exit_with_message, numeric::xyzVector< T >::x(), xform_pose_rev(), numeric::xyzVector< T >::y(), and numeric::xyzVector< T >::z().

Variable Documentation

TR

basic::Tracer TR("rsd_canonical_units") ( "rsd_canonical_units"  )

static