score_jd2.cc File Reference

Score a pose! More...

#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/JobDistributorFactory.hh>
#include <protocols/jd2/internal_util.hh>
#include <protocols/jd2/SilentFileJobOutputter.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/constraint_movers/ConstraintSetMover.hh>
#include <protocols/symmetry/SetupForSymmetryMover.hh>
#include <protocols/membrane/AddMembraneMover.hh>
#include <protocols/membrane/TransformIntoMembraneMover.hh>
#include <protocols/membrane/OptimizeProteinEmbeddingMover.hh>
#include <basic/Tracer.hh>
#include <devel/init.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <basic/options/option.hh>
#include <core/scoring/constraints/util.hh>
#include <core/scoring/electron_density/util.hh>
#include <protocols/topology_broker/TopologyBroker.hh>
#include <protocols/topology_broker/util.hh>
#include <utility/excn/Exceptions.hh>
#include <string>
#include <basic/options/keys/broker.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/mp.OptionKeys.gen.hh>
#include <basic/options/keys/rescore.OptionKeys.gen.hh>
#include <basic/options/keys/edensity.OptionKeys.gen.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/option_macros.hh>
#include <core/pose/Pose.hh>
#include <protocols/electron_density/SetupForDensityScoringMover.hh>

Classes
class	MyScoreMover

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("main")

Detailed Description

Score a pose!

Author

(Original) Oliver Lange, Mike Tyka

Adjusted for Membranes - Rebecca Alford

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, rescore::assign_ss(), basic::options::OptionKeys::constraints::cst_fa_file, basic::options::OptionKeys::cluster::energy_based_clustering::cst_file, test.T009_Exceptions::e, basic::init(), edensity::mapfile(), basic::options::OptionKeys::abinitio::membrane, OPT, optimize_embedding(), option, register_options(), broker::setup(), rescore::skip(), basic::options::OptionKeys::symmetry::symmetry_definition, basic::options::OptionKeys::mp::setup::transform_into_membrane, and basic::options::OptionKeys::inout::dbms::user.

Variable Documentation

TR

basic::Tracer TR("main") ( "main"  )

static