#include <apps/pilot/christophe/PCS_main.hh>
#include <protocols/scoring/methods/pcs/PseudocontactShiftTensor.hh>
#include <protocols/scoring/methods/pcs/PseudocontactShiftEnergy.hh>
#include <core/util/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/pose/Pose.hh>
#include <devel/init.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <basic/options/keys/abinitio.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/evaluation.OptionKeys.gen.hh>
#include <basic/options/keys/filters.OptionKeys.gen.hh>
#include <basic/options/keys/frags.OptionKeys.gen.hh>
#include <basic/options/keys/jumps.OptionKeys.gen.hh>
#include <basic/options/keys/loopfcst.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/templates.OptionKeys.gen.hh>
#include <protocols/topology_broker/TopologyBroker.hh>
#include <protocols/topology_broker/util.hh>
#include <protocols/topology_broker/FragmentClaimer.hh>
#include <protocols/topology_broker/JumpClaimer.hh>
#include <protocols/topology_broker/SequenceClaimer.hh>
#include <protocols/topology_broker/RigidChunkClaimer.hh>
#include <protocols/topology_broker/ConstraintClaimer.hh>
#include <protocols/topology_broker/LoopFragmentClaimer.hh>
#include <protocols/topology_broker/CutBiasClaimer.hh>
#include <protocols/jumping/SecondaryStructure.hh>
#include <protocols/abinitio/FragmentSampler.hh>
#include <protocols/abinitio/ConstraintFragmentSampler.hh>
#include <protocols/abinitio/AbrelaxMover.hh>
#include <protocols/abinitio/BrokerMain.hh>
#include <protocols/jobdist/JobDistributors.hh>
#include <protocols/jobdist/Jobs.hh>
#include <core/kinematics/util.hh>
#include <protocols/abinitio/FragmentMover.hh>
#include <protocols/abinitio/SmoothFragmentMover.hh>
#include <protocols/abinitio/GunnCost.hh>
#include <protocols/relax/util.hh>
#include <core/types.hh>
#include <core/pose/util.hh>
#include <basic/MetricValue.hh>
#include <basic/options/after_opts.hh>
#include <basic/options/option_macros.hh>
#include <core/fragment/ConstantLengthFragSet.hh>
#include <core/fragment/BBTorsionSRFD.hh>
#include <core/fragment/util.hh>
#include <core/fragment/FragmentIO.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/util.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/scoring/constraints/util.hh>
#include <core/scoring/constraints/NamedAtomPairConstraint.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/constraints/BoundConstraint.hh>
#include <protocols/pose_metric_calculators/ClashCountCalculator.hh>
#include <core/io/silent/silent.fwd.hh>
#include <core/io/silent/SilentStructFactory.hh>
#include <core/sequence/util.hh>
#include <protocols/evaluation/PoseEvaluator.hh>
#include <protocols/evaluation/RmsdEvaluator.hh>
#include <protocols/evaluation/JumpEvaluator.hh>
#include <protocols/evaluation/TimeEvaluator.hh>
#include <protocols/evaluation/PCA.hh>
#include <protocols/evaluation/PoseMetricEvaluator.hh>
#include <protocols/evaluation/ConstraintEvaluator.hh>
#include <protocols/evaluation/util.hh>
#include <protocols/evaluation/ChemicalShiftEvaluator.hh>
#include <protocols/loops/SlidingWindowLoopClosure.hh>
#include <protocols/loops/WidthFirstSlidingWindowLoopClosure.hh>
#include <protocols/loops/LoopClass.hh>
#include <protocols/loops/LoopMover.hh>
#include <protocols/loops/util.hh>
#include <protocols/idealize/idealize.hh>
#include <protocols/viewer/viewers.hh>
#include <protocols/filters/Filter.hh>
#include <protocols/simple_filters/RGFilter.hh>
#include <protocols/simple_filters/COFilter.hh>
#include <protocols/simple_filters/SheetFilter.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <protocols/moves/MoverStatus.hh>
#include <numeric/random/random.hh>
#include <utility/io/izstream.hh>
#include <utility/vector1.hh>
#include <basic/Tracer.hh>
#include <utility/io/util.hh>
#include <utility/exit.hh>
#include <utility/excn/Exceptions.hh>
#include <cstdlib>
#include <string>
#include <vector>
#include <core/import_pose/import_pose.hh>

Functions
void	run ()

int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR_PCS_main ("apps.pilot.christophe.PCS_main")

Detailed Description

Parameters

Function Documentation

◆ main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, create_a3b_hbs::i, basic::init(), surface_app::native, option, basic::options::OptionKeys::nmr::pcs::pcs, kic_runner::pdb, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file(), register_options_broker(), run(), basic::options::OptionKeys::frags::scoring::scoring, and TR_PCS_main.

◆ run()

void run ( )

References basic::options::OptionKeys::dna::design::checkpoint, basic::options::OptionKeys::run::checkpoint_interval, kic_runner::database, basic::options::OptionKeys::cmiles::jumping::jumping, option, and basic::options::OptionKeys::inout::dbms::user.

Referenced by main().

Variable Documentation

◆ TR_PCS_main

basic::Tracer TR_PCS_main("apps.pilot.christophe.PCS_main") ( "apps.pilot.christophe.PCS_main" )

static