sphere_hierarchy.cc File Reference

#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>
#include <basic/options/option_macros.hh>
#include <basic/Tracer.hh>
#include <basic/database/open.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/import_pose/import_pose.hh>
#include <devel/init.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/ScoreFileSilentStruct.hh>
#include <core/kinematics/Stub.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/init_id_map.hh>
#include <core/pose/symmetry/util.hh>
#include <core/scoring/sasa.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/symmetry/SymmetricScoreFunction.hh>
#include <core/scoring/packing/compute_holes_score.hh>
#include <numeric/conversions.hh>
#include <numeric/model_quality/rms.hh>
#include <numeric/random/random.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyz.io.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/FArray3D.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <apps/pilot/will/will_util.ihh>

Typedefs
typedef numeric::xyzVector< Real >	Vec
typedef numeric::xyzMatrix< Real >	Matf

Functions
vector1< Size >	getclosest (Vec const &v, vector1< Vec > const &sph)
int	levelof (int i)
int	main (int argc, char const *argv[])

Typedef Documentation

Matf

typedef numeric::xyzMatrix<Real> Matf

Vec

typedef numeric::xyzVector<Real> Vec

Function Documentation

getclosest()

vector1<Size> getclosest	(	Vec const &	v,
		vector1< Vec > const &	sph
	)

References create_a3b_hbs::j, create_a3b_hbs::k, extract_by_sidechain_sasa_score::l, and kmeans_adaptive_kernel_density_bb_dependent_rotlib::v.

Referenced by main().

levelof()

int levelof

(

int

i

)

References create_a3b_hbs::i.

Referenced by main().

main()

int main	(	int	argc,
		char const *	argv[]
	)

References utility::io::izstream::close(), count, utility::io::oc::cout, ObjexxFCL::format::F(), getclosest(), create_a3b_hbs::i, create_a3b_hbs::j, create_a3b_hbs::k, extract_by_sidechain_sasa_score::l, basic::options::OptionKeys::out::level, levelof(), kmeans_adaptive_kernel_density_bb_dependent_rotlib::n, erraser_single_res_analysis::out, subloop_histogram::size, str(), utility_exit_with_message, x, predPRE::y, and predPRE::z.