SnugDockProtocol.cc File Reference

#include <protocols/antibody/snugdock/SnugDockProtocol.hh>
#include <protocols/antibody/AntibodyInfo.hh>
#include <protocols/antibody/AntibodyNumberingConverterMover.hh>
#include <protocols/antibody/snugdock/SnugDock.hh>
#include <protocols/antibody/util.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loop_modeling/LoopProtocol.hh>
#include <protocols/loop_modeler/LoopModeler.hh>
#include <protocols/docking/DockingProtocol.hh>
#include <protocols/analysis/InterfaceAnalyzerMover.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/util.hh>
#include <core/pose/chains_util.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/Residue.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/ScoreFunction.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/antibody.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pack/task/operation/NoRepackDisulfides.hh>
#include <core/pack/task/operation/OperateOnResidueSubset.hh>
#include <core/pack/task/operation/ResLvlTaskOperations.hh>
#include <core/select/util/interface_vector_calculate.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/docking.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <utility/tools/make_vector1.hh>
#include <utility/excn/Exceptions.hh>
#include <set>
#include <utility/stream_util.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::antibody
	protocols::antibody::snugdock

Functions
static basic::Tracer	TR ("protocols.antibody.SnugDockProtocol")
std::ostream &	protocols::antibody::snugdock::operator<< (std::ostream &out, SnugDockProtocol const &snugdockprotocol)

Function Documentation

TR()

static basic::Tracer TR ( "protocols.antibody.SnugDockProtocol"  )

static