|
| static basic::Tracer | TR ("protocols.geometry.RB_geometry") |
| |
| numeric::xyzMatrix_real | protocols::geometry::random_reorientation_matrix (const core::Real phi_range, const core::Real psi_range) |
| |
| core::Vector | protocols::geometry::centroid_by_residues (core::conformation::ResidueCOPs residue_c_pointers) |
| |
| core::Vector | protocols::geometry::centroid_by_chains (core::pose::Pose const &pose, utility::vector1< core::Size > chain_ids) |
| |
| core::Vector | protocols::geometry::centroid_by_chain (core::pose::Pose const &pose, core::Size const chain_id) |
| |
| void | protocols::geometry::centroids_by_jump (core::pose::Pose const &pose, core::Size const jump_id, core::Vector &upstream_ctrd, core::Vector &downstream_ctrd) |
| | Unweighted centroids of all atoms upstream of the jump vs. all atoms downstream of the jump. More...
|
| |
| void | protocols::geometry::centroids_by_jump (core::pose::Pose const &pose, core::Size const jump_id, core::Vector &upstream_ctrd, core::Vector &downstream_ctrd, utility::vector1< bool > ok_for_centroid_calculation) |
| | Unweighted centroids of all atoms upstream of the jump vs. all atoms downstream of the jump. More...
|
| |
| std::pair< core::Vector, core::Vector > | protocols::geometry::centroid_pair_by_jump (core::pose::Pose const &pose, core::Size jump_id) |
| |
| core::Vector | protocols::geometry::upstream_centroid_by_jump (core::pose::Pose const &pose, core::Size jump_id) |
| |
| core::Vector | protocols::geometry::downstream_centroid_by_jump (core::pose::Pose const &pose, core::Size jump_id) |
| |
| void | protocols::geometry::centroids_by_jump_int (core::pose::Pose const &pose, core::Size jump_id, core::Vector &upstream_ctrd, core::Vector &downstream_ctrd) |
| | Unweighted centroids of all atoms upstream of the jump vs. all atoms downstream of the jump for interface residues only. needed to calculate rb_centers for fullatom docking - Sid C. More...
|
| |
| numeric::xyzVector< core::Real > | protocols::geometry::center_of_mass (core::pose::Pose const &pose, int const start, int const stop) |
| | calculates the center of mass of a pose More...
|
| |
