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Rosetta
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#include <protocols/seeded_abinitio/SeededAbinitio_util.hh>#include <protocols/seeded_abinitio/SeedFoldTree.hh>#include <protocols/seeded_abinitio/SeedFoldTreeCreator.hh>#include <core/conformation/Conformation.hh>#include <core/conformation/Residue.hh>#include <core/kinematics/FoldTree.hh>#include <basic/datacache/DataMap.fwd.hh>#include <core/types.hh>#include <core/chemical/VariantType.hh>#include <core/import_pose/import_pose.hh>#include <core/pose/Pose.fwd.hh>#include <core/pose/Pose.hh>#include <core/pose/variant_util.hh>#include <core/scoring/ScoreFunction.fwd.hh>#include <protocols/loops/Loop.hh>#include <protocols/loops/loops_main.hh>#include <protocols/rosetta_scripts/util.hh>#include <protocols/simple_ddg/DdgFilter.hh>#include <utility/vector1.hh>#include <utility/tag/Tag.fwd.hh>#include <utility/tag/Tag.hh>#include <numeric/random/random.hh>#include <set>#include <string>#include <utility>#include <basic/Tracer.hh>#include <protocols/simple_ddg/AlaScan.hh>#include <utility/tag/XMLSchemaGeneration.hh>#include <protocols/moves/mover_schemas.hh>Namespaces | |
| protocols | |
| The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP. | |
| protocols::seeded_abinitio | |
Functions | |
| static basic::Tracer | TR ("protocols.seeded_abinitio.SeedFoldTree") |
| Size | protocols::seeded_abinitio::define_cut_point_stochasticly (core::Size start_resi, core::Size stop_resi, std::string secondarystruct_seq, core::Size start_fold_pose) |
| std::pair< core::Size, core::Size > | protocols::seeded_abinitio::get_closest_residue_pair (core::Size seed_start, core::Size seed_stop, core::pose::PoseOP &target_seed_pose) |
| std::pair< core::Size, core::Size > | protocols::seeded_abinitio::find_nearest_residue (core::Size anchor, pose::PoseOP &target_seed_pose) |
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static |
1.9.1