SecondarySimilarity.cc File Reference

scores a fragment by secondary structure similarity More...

#include <protocols/frag_picker/scores/SecondarySimilarity.hh>
#include <core/types.hh>
#include <protocols/frag_picker/FragmentCandidate.hh>
#include <protocols/frag_picker/scores/FragmentScoreMap.hh>
#include <protocols/frag_picker/scores/fragment_scoring_utilities.hh>
#include <core/fragment/SecondaryStructure.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::frag_picker
	protocols::frag_picker::scores

Functions
static basic::Tracer	protocols::frag_picker::scores::trSecondarySimilarity ("protocols.frag_picker.scores.SecondarySimilarity")

Detailed Description

scores a fragment by secondary structure similarity

Author

Dominik Gront (dgron.nosp@m.t@ch.nosp@m.em.uw.nosp@m..edu.nosp@m..pl)