CrosslinkerMover.cc File Reference

This mover links two or more residues with a (possibly symmetric) cross-linker. It adds the crosslinker, sets up constraints, optionally packs and energy-mimizes it into place (packing/minimizing only the crosslinker and the side-chains to which it connects), and then optionally relaxes the whole structure. More...

#include <protocols/cyclic_peptide/CrosslinkerMover.hh>
#include <protocols/cyclic_peptide/CrosslinkerMoverCreator.hh>
#include <protocols/cyclic_peptide/crosslinker/CrosslinkerMoverHelper.hh>
#include <protocols/cyclic_peptide/crosslinker/TBMB_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/Thioether_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/1_4_BBMB_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/TMA_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/TetrahedralMetal_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/OctahedralMetal_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/TrigonalPlanarMetal_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/TrigonalPyramidalMetal_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/SquarePlanarMetal_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/SquarePyramidalMetal_Helper.hh>
#include <protocols/cyclic_peptide/crosslinker/Lanthionine_Helper.hh>
#include <core/pose/Pose.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/select/residue_selector/ResidueSelector.hh>
#include <core/select/residue_selector/util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/Energies.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/FoldTree.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/relax/FastRelax.hh>
#include <protocols/moves/MoverStatus.hh>
#include <protocols/moves/mover_schemas.hh>
#include <basic/citation_manager/CitationCollection.hh>
#include <basic/citation_manager/CitationManager.hh>
#include <basic/Tracer.hh>
#include <utility/tag/Tag.hh>
#include <utility/tag/XMLSchemaGeneration.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::cyclic_peptide

Functions
static basic::Tracer	TR ("protocols.cyclic_peptide.CrosslinkerMover")
std::ostream &	protocols::cyclic_peptide::operator<< (std::ostream &os, CrosslinkerMover const &mover)

Detailed Description

This mover links two or more residues with a (possibly symmetric) cross-linker. It adds the crosslinker, sets up constraints, optionally packs and energy-mimizes it into place (packing/minimizing only the crosslinker and the side-chains to which it connects), and then optionally relaxes the whole structure.

Author

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m..wash.nosp@m.ingt.nosp@m.on.ed.nosp@m.u)

Function Documentation

TR()

static basic::Tracer TR ( "protocols.cyclic_peptide.CrosslinkerMover"  )

static