Directory dependency graph for operation:
Files | |
| file | ClashBasedRepackShell.cc |
| ClashBasedRepackShell header file. | |
| file | ClashBasedRepackShell.fwd.hh |
| forward declaration for ClashBasedRepackShell | |
| file | ClashBasedRepackShell.hh |
| ClashBasedRepackShell header file. | |
| file | ClashBasedRepackShellCreator.hh |
| file | DesignRestrictions.cc |
| Combine a set of ResidueSelectors and ResidueLevelTaskOperations concisely, using boolean logic to join selectors concisely. | |
| file | DesignRestrictions.fwd.hh |
| Combine a set of ResidueSelectors and ResidueLevelTaskOperations concisely, using boolean logic to join selectors concisely. | |
| file | DesignRestrictions.hh |
| file | DesignRestrictionsCreator.hh |
| file | EnableMultiCoolAnnealer.cc |
| Task Operation for turning on the multi-cool annealer. | |
| file | EnableMultiCoolAnnealer.fwd.hh |
| Task Operation for turning on the multi-cool annealer. | |
| file | EnableMultiCoolAnnealer.hh |
| file | EnableMultiCoolAnnealerCreator.hh |
| file | EnableSmartAnnealer.cc |
| file | EnableSmartAnnealer.fwd.hh |
| file | EnableSmartAnnealer.hh |
| The smart annealer uses tensorflow to decrease the sample space of a typical packing run. | |
| file | EnableSmartAnnealerCreator.hh |
| file | FillAUTOTaskOperation.cc |
| fills the AUTO behavior for all residues in Task. Useful if a protocol expects AUTO-style resfile, but no resfile present. | |
| file | FillAUTOTaskOperation.fwd.hh |
| fills the AUTO behavior for all residues in Task. Useful if a protocol expects AUTO-style resfile, but no resfile present. | |
| file | FillAUTOTaskOperation.hh |
| file | FillAUTOTaskOperationCreator.hh |
| file | KeepSequenceSymmetry.cc |
| Use this when you give Rosetta a multimer to design and you want the sequences of the chains to be the same but you don't need strict physical symmetry. | |
| file | KeepSequenceSymmetry.fwd.hh |
| file | KeepSequenceSymmetry.hh |
| Use this when you give Rosetta a multimer to design and you want the sequences of the chains to be the same but you don't need strict physical symmetry. | |
| file | KeepSequenceSymmetryCreator.hh |
| file | NoRepackDisulfides.cc |
| prevent disulfides from being repacked; assumes disulfide info in Pose is up-to-date | |
| file | NoRepackDisulfides.fwd.hh |
| forward declaration for NoRepackDisulfides | |
| file | NoRepackDisulfides.hh |
| prevent disulfides from being repacked; assumes disulfide info in Pose is up-to-date | |
| file | NoRepackDisulfidesCreator.hh |
| file | OperateOnCertainResidues.cc |
| class to support the general case of configuring PackerTask at the ResidueLevelTask level in some way, with an optional filter to limit the effects to certain residues | |
| file | OperateOnCertainResidues.fwd.hh |
| Forward declaration of a class that performs an operation on a packer task, in a configurable residue-specific manner. | |
| file | OperateOnCertainResidues.hh |
| class to support the general case of configuring PackerTask at the ResidueLevelTask level in some way, with an optional filter to limit the effects to certain residues | |
| file | OperateOnCertainResiduesCreator.hh |
| file | OperateOnResidueSubset.cc |
| Class, much like the OperateOnResidueSubset task operation, to apply a particular residue-level task operation on the residues identified by a ResidueSelector. | |
| file | OperateOnResidueSubset.fwd.hh |
| Forward declaration of a class that performs an operation on a packer task, in a configurable residue-specific manner. | |
| file | OperateOnResidueSubset.hh |
| Class, much like the OperateOnCertainResidues task operation, to apply a particular residue-level task operation on the residues identified by a ResidueSelector (Or a pre-selected set of residues). | |
| file | OperateOnResidueSubsetCreator.hh |
| file | OptCysHG.cc |
| run optH on non-disulfided bonded CYS only; meant to relieve any clashes caused by swapping of CYD->CYS after calling Conformation::detect_disulfides() | |
| file | OptCysHG.fwd.hh |
| forward declaration for OptCysHG | |
| file | OptCysHG.hh |
| run optH on non-disulfided bonded CYS only; meant to relieve any clashes caused by swapping of CYD->CYS after calling Conformation::detect_disulfides() | |
| file | OptCysHGCreator.hh |
| file | OptH.cc |
| run optH | |
| file | OptH.fwd.hh |
| forward declaration for OptH | |
| file | OptH.hh |
| run optH | |
| file | OptHCreator.hh |
| file | parsing_utilities.cc |
| Utility functions for extracting packer-related objects out of the DataMap. | |
| file | parsing_utilities.hh |
| Utility functions for extracting packer-related objects out of the DataMap. | |
| file | ReplicateTask.cc |
| file | ReplicateTask.fwd.hh |
| forward declaration for ReplicateTask | |
| file | ReplicateTask.hh |
| file | ResFilter.fwd.hh |
| Forward declaration of a class that takes a pose and a residue index, and returns true or false. | |
| file | ResFilter.hh |
| abstract base class that takes a pose and a residue index, and returns true or false | |
| file | ResFilterCreator.fwd.hh |
| file | ResFilterCreator.hh |
| file | ResFilterCreators.hh |
| Declaration for the class that connects ResFilters with the ResFilterFactory. | |
| file | ResFilterFactory.cc |
| file | ResFilterFactory.fwd.hh |
| file | ResFilterFactory.hh |
| file | ResFilterRegistrator.hh |
| file | ResFilters.cc |
| file | ResFilters.fwd.hh |
| core-level (very general) classes that take a pose and a residue index, and returns true or false | |
| file | ResFilters.hh |
| core-level (very general) classes that take a pose and a residue index, and return true or false | |
| file | ResLvlTaskOperation.fwd.hh |
| Forward declaration of a class that performs an operation on ResidueLevelTask usually by a TaskFactory right after the task's construction. | |
| file | ResLvlTaskOperation.hh |
| Class that performs an operation on ResidueLevelTask, usually by a PackerTaskFactory right after the task's construction. | |
| file | ResLvlTaskOperationCreator.fwd.hh |
| file | ResLvlTaskOperationCreator.hh |
| file | ResLvlTaskOperationCreators.hh |
| Declaration for the class that connects ResLvlTaskOperations with the ResLvlTaskOperationFactory. | |
| file | ResLvlTaskOperationFactory.cc |
| file | ResLvlTaskOperationFactory.fwd.hh |
| file | ResLvlTaskOperationFactory.hh |
| file | ResLvlTaskOperationRegistrator.hh |
| file | ResLvlTaskOperations.cc |
| file | ResLvlTaskOperations.fwd.hh |
| Forward declaration for core-level (very general) derived classes that wrap widely-used methods of the ResidueLevelTask interface. These are used by higher-level TaskOperations that allow the user to configure the behavior of PackerTasks that are created by TaskFactory. | |
| file | ResLvlTaskOperations.hh |
| core-level (very general) derived classes that wrap widely-used methods of the ResidueLevelTask interface. These are used by higher-level TaskOperations that allow the user to configure the behavior of PackerTasks that are created by TaskFactory. | |
| file | RestrictInteractionGraphThreadsOperation.cc |
| A task operation that restricts the number of threads allowed for interaction graph computation. | |
| file | RestrictInteractionGraphThreadsOperation.fwd.hh |
| A task operation that restricts the number of threads allowed for interaction graph computation. | |
| file | RestrictInteractionGraphThreadsOperation.hh |
| file | RestrictInteractionGraphThreadsOperationCreator.hh |
| file | task_op_schemas.cc |
| Utility functions for creating XML Schema definitions for TaskOperations. | |
| file | task_op_schemas.hh |
| Utility functions for creating XML Schema definitions for TaskOperations. | |
| file | TaskOperation.cc |
| An operation to perform on a packer task – usually, by a PackerTaskFactory right after the task's construction. | |
| file | TaskOperation.fwd.hh |
| Forward declaration of a class that performs an operation on a packer task, usually, by a PackerTaskFactory right after the task's construction. | |
| file | TaskOperation.hh |
| An operation to perform on a packer task – usually, by a PackerTaskFactory right after the task's construction. | |
| file | TaskOperationCreator.fwd.hh |
| file | TaskOperationCreator.hh |
| file | TaskOperationCreators.hh |
| Declaration for the class that connects TaskOperations with the TaskOperationFactory. | |
| file | TaskOperationFactory.cc |
| file | TaskOperationFactory.fwd.hh |
| file | TaskOperationFactory.hh |
| file | TaskOperationRegistrator.hh |
| file | TaskOperations.cc |
| file | TaskOperations.fwd.hh |
| Forward declaration of a class that performs an operation on a packer task, usually, by a PackerTaskFactory right after the task's construction. | |
| file | TaskOperations.hh |
| An operation to perform on a packer task – usually, by a PackerTaskFactory right after the task's construction This is an incomplete list. Freely define your own TaskOperation and hand it to a PackerTaskFactory. | |
