- f -

• FA_STANDARD() : core::chemical
• FA_STANDARD_DEFAULT() : core::scoring
• FA_STANDARD_SOFT() : core::scoring
• factorsLTE19() : core::scoring::electron_density
• factorsLTE5() : core::scoring::electron_density
• fade_energy() : core::scoring::hbonds
• fastexp() : core::scoring
• fastlog2() : core::scoring
• fastpow() : core::scoring
• fastpow2() : core::scoring
• figure_out_base_pair_orientation() : core::pose::rna
• figure_out_chain_numbers_from_full_model_info() : core::pose::full_model_info
• figure_out_chain_numbers_from_full_model_info_const() : core::pose::full_model_info
• figure_out_conventional_chains_from_full_model_info() : core::pose::full_model_info
• figure_out_dock_domain_map_from_full_model_info_const() : core::pose::full_model_info
• figure_out_number_base_contacts() : core::pose::rna
• figure_out_pose_domain_map() : core::pose::full_model_info
• figure_out_pose_domain_map_const() : core::pose::full_model_info
• figure_out_reasonable_rna_fold_tree() : core::pose::rna
• figure_out_repackable_residues() : core::pack
• file_is_atom_tree_diff() : core::import_pose::atom_tree_diffs
• filenames_from_list_file() : core::import_pose::pose_stream
• fill_atom_derivs_for_acceptor() : core::scoring::geometric_solvation
• fill_atom_derivs_for_donor() : core::scoring::geometric_solvation
• fill_bb_pos() : core::scoring
• fill_chi_rotamers_with_center_and_stddev() : core::pack::rotamer_set
• fill_hbond_bb_pair_score_dssp() : core::scoring::dssp
• fill_hbond_set() : core::scoring::hbonds
• fill_hbond_set_by_AHdist_threshold() : core::scoring::hbonds
• fill_ideal_xyz_from_icoor() : core::chemical
• fill_in_chain_terminii() : core::pack::task::operation::util
• fill_intra_res_hbond_set() : core::scoring::hbonds
• fill_name_map() : core::io::pdb
• fill_rmsd_coordinates() : core::scoring
• fill_score_range() : core::scoring
• fill_template_frames_from_pdb() : core::fragment
• fill_xform_score_from_file() : core::scoring::motif
• filter_chem_shift_data_list() : core::scoring::rna::chemical_shift
• filter_motifs() : core::scoring::motif
• find_basepairs() : core::scoring::dna
• find_bonds_in_rings() : core::chemical
• find_chi_bonds() : core::chemical
• find_connected_components() : core::graph
• find_cutpoint_variants() : core::scoring::methods
• find_interface_pointing_residues_from_neighbs() : core::pack::task::operation::util
• find_jump_partners_within_CB_cutoff() : core::pack::task::operation::util
• find_metalbinding_atoms() : core::util
• find_nbr_dist() : core::chemical
• find_neighbors() : core::conformation
• find_neighbors_3dgrid() : core::conformation
• find_neighbors_3dgrid_restricted() : core::conformation
• find_neighbors_naive() : core::conformation
• find_neighbors_naive_restricted() : core::conformation
• find_neighbors_naive_surface() : core::conformation
• find_neighbors_octree() : core::conformation
• find_neighbors_octree_restricted() : core::conformation
• find_neighbors_restricted() : core::conformation
• find_neighbors_stripe() : core::conformation
• find_neighbors_within_CB_cutoff() : core::pack::task::operation::util
• find_new_symmetric_jump_residues() : core::pose::symmetry
• find_residue_max_radii() : core::pack
• find_seqpos_of_saccharides_parent_residue() : core::pose::carbohydrates
• find_stub_transform() : core::kinematics
• find_symmetric_basejump_anchor() : core::pose::symmetry
• find_weights_file() : core::scoring
• FindBoundaries() : core::fragment
• findSampling() : core::scoring::electron_density
• findSampling5() : core::scoring::electron_density
• first_base_atom() : core::chemical::rna
• first_base_atom_index() : core::chemical::rna
• fix_bfactorsH() : core::scoring::cryst
• fix_bfactorsMissing() : core::scoring::cryst
• fix_sugar_coords() : core::pose::rna
• fix_sugar_coords_WORKS_BUT_SLOW() : core::pose::rna
• fixup_patches() : core::chemical
• fixup_rinfo_based_on_residue_type_set() : core::io::pdb
• flatten_list() : core::fragment
• flip_atom_xyz() : core::io::pdb
• fold_tree_entry_point() : core::conformation::symmetry
• form_disulfide() : core::conformation
• formatted_icoord_tree() : core::chemical
• fragment_set_slice() : core::fragment
• frdc() : core::scoring
• frdcDa() : core::scoring
• frdcDaR() : core::scoring
• frdcR() : core::scoring
• full_model_info_defined() : core::pose::full_model_info
• full_model_parameter_type_from_string() : core::pose::full_model_info
• full_model_size() : core::pose::full_model_info
• full_to_sub() : core::pose::full_model_info