- g -

• g_ : protocols::scoring::methods::pcs2::PcsTensor , protocols::scoring::methods::pcs::PCS_tensor , protocols::scoring::methods::pcsTs1::PCS_tensor_Ts1 , protocols::scoring::methods::pcsTs2::PCS_tensor_Ts2 , protocols::scoring::methods::pcsTs3::PCS_tensor_Ts3 , protocols::scoring::methods::pcsTs4::PCS_tensor_Ts4
• gamma : protocols::protein_interface_design::Transformation , Transformation
• gamma_ : protocols::antibody::H3RefineCCD , protocols::canonical_sampling::BiasEnergy , protocols::dna::DNABase
• Gamma_ : protocols::md::MDBase
• gamma_ : protocols::stepwise::sampler::rigid_body::EulerAngles
• gap_distance_cutoff_ : protocols::farna::RNA_LoopCloser
• gap_size_ : protocols::stepwise::modeler::rna::checker::RNA_AtrRepChecker , protocols::stepwise::modeler::rna::checker::RNA_ChainClosableGeometryChecker , protocols::stepwise::modeler::working_parameters::StepWiseBasicWorkingParameters
• gapspan_ : protocols::dna::DesignProteinBackboneAroundDNA
• garbage_collector_ : protocols::jd2::MpiFileBuffer
• gaussian_ : protocols::simple_moves::sidechain_moves::PerturbChiSidechainMover
• gaussian_stdev_ : protocols::stepwise::sampler::rna::RNA_MC_Suite
• GDBfileName : protocols::sparta::GDB
• gdt_by_TM_ : protocols::comparative_modeling::Align_RmsdEvaluator
• gen_alg_ : protocols::dna::DnaInterfaceMultiStateDesign , protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover
• general_permit_overlap_ : protocols::match::BumpGrid
• generate_invrot_csts_ : protocols::toolbox::match_enzdes_util::InvrotTreeNode
• generations_ : protocols::dna::DnaInterfaceMultiStateDesign , protocols::genetic_algorithm::GeneticAlgorithmBase , protocols::protein_interface_design::movers::ProteinInterfaceMultiStateDesignMover
• generator_ : protocols::forge::constraints::RemoveCsts
• generator_id_ : protocols::forge::constraints::RemoveCsts
• generic_output_number_ : protocols::match::output::MatchScoreWriter
• generic_pose_build_resids_ : protocols::match::MatcherTask
• genericRB_sigR : protocols::rbsegment_relax::RBSegmentRelax
• genericRB_sigT : protocols::rbsegment_relax::RBSegmentRelax
• GenericRBMoveSet_ : protocols::rbsegment_relax::RBSegmentRelax
• geo_sol_energy_ : protocols::features::GeometricSolvationFeatures
• geom_cst_ : protocols::toolbox::match_enzdes_util::InvrotTreeNode
• geom_cst_has_primary_modification_ : protocols::match::Matcher
• geom_cst_id_ : protocols::match::downstream::DownstreamAlgorithm
• geom_csts_downstream_output_ : protocols::match::MatcherTask
• geom_csts_with_primary_hitlist_modificiations_ : protocols::match::Matcher
• geom_id_ : protocols::match::output::WriteUpstreamHitKinemage
• geomcst_is_upstream_only_ : protocols::match::Matcher
• geomcst_seqpos_ : protocols::forge::constraints::InvrotTreeRCG
• geomcsts_for_superposition_ : protocols::toolbox::match_enzdes_util::AlignPoseToInvrotTreeMover
• geometry_is_initialized_ : protocols::fldsgn::topology::BetaAlphaBetaMotif , protocols::fldsgn::topology::HSSTriplet
• get_init_value_ : protocols::matdes::GetRBDOFValues
• ghost_loops_ : protocols::stepwise::modeler::options::StepWiseProteinModelerOptions , protocols::stepwise::modeler::protein::StepWiseProteinBackboneSampler
• ghost_map_ : protocols::stepwise::modeler::protein::StepWiseProteinBackboneSampler
• ghost_native_pose_ : protocols::stepwise::modeler::protein::StepWiseProteinBackboneSampler
• ghost_pose_ : protocols::stepwise::modeler::protein::StepWiseProteinBackboneSampler
• give_up_ : protocols::loops::loop_closure::ccd::WidthFirstSlidingWindowLoopClosure
• global_optimize_ : protocols::stepwise::modeler::options::StepWiseProteinModelerOptions
• global_sample_res_list_ : protocols::stepwise::modeler::working_parameters::StepWiseWorkingParameters
• gly_dG : protocols::analysis::InterfaceData
• glycorr_alt_conf_ : protocols::flexpack::interaction_graph::OTFFlexbbEdge
• glycorr_curr_conf_ : protocols::flexpack::interaction_graph::OTFFlexbbEdge
• glycorr_energies_ : protocols::flexpack::interaction_graph::OTFFlexbbEdge
• good : protocols::jd2::archive::MPIArchiveJobDistributor::CompletionMessage
• good_ : protocols::abinitio::Template , protocols::abinitio::Templates
• good_angle_count : protocols::stepwise::modeler::rna::StepWiseRNA_CountStruct
• good_atr_rotamer_count : protocols::stepwise::modeler::rna::StepWiseRNA_CountStruct
• good_bin_rep_count : protocols::stepwise::modeler::rna::StepWiseRNA_CountStruct
• good_data_ : protocols::frag_picker::LazySortedVector1< T, StrictWeakOrdering >
• good_distance_count : protocols::stepwise::modeler::rna::StepWiseRNA_CountStruct
• good_fix_pos_ : protocols::topology_broker::RigidChunkClaimer::CM_SuggestFixResidue
• good_rep_rotamer_count : protocols::stepwise::modeler::rna::StepWiseRNA_CountStruct
• goodfrags_ : protocols::toolbox::pose_metric_calculators::FragQualCalculator
• got_termination_signal_ : protocols::mpi_refinement::MPI_Refine_Master
• gp_b_allow_independent_alignment_per_fragment_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_allow_repeat_same_graft_output_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_full_motif_bb_alignment_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_graft_only_hotspots_by_sidechain_replacement_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_is_first_run_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_only_allow_if_C_point_match_aa_identity_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_only_allow_if_N_point_match_aa_identity_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_b_revert_graft_to_native_sequence_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_i_clash_score_cutoff_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_p_contextStructure_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_p_motif_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_p_target_pose_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_r_NC_points_RMSD_tolerance_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_r_RMSD_tolerance_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_s_clash_test_residue_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_vp_combinatory_fragment_size_delta_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_vp_max_fragment_replacement_size_delta_ : protocols::motif_grafting::movers::MotifGraftMover
• gp_vvr_hotspots_ : protocols::motif_grafting::movers::MotifGraftMover
• gradient_bins_ : protocols::qsar::RenderGridsToKinemage
• gradPtr : protocols::viewer::triangleIterator
• graft_designer_ : protocols::antibody::design::AntibodyDesignMover
• graft_h1_ : protocols::antibody::GraftCDRLoopsProtocol , protocols::antibody_legacy::AntibodyModeler , protocols::antibody_legacy::GraftMover
• graft_h2_ : protocols::antibody::GraftCDRLoopsProtocol , protocols::antibody_legacy::AntibodyModeler , protocols::antibody_legacy::GraftMover
• graft_h3_ : protocols::antibody::GraftCDRLoopsProtocol , protocols::antibody_legacy::AntibodyModeler , protocols::antibody_legacy::GraftMover
• graft_l1_ : protocols::antibody::GraftCDRLoopsProtocol , protocols::antibody_legacy::AntibodyModeler , protocols::antibody_legacy::GraftMover
• graft_l2_ : protocols::antibody::GraftCDRLoopsProtocol , protocols::antibody_legacy::AntibodyModeler , protocols::antibody_legacy::GraftMover
• graft_l3_ : protocols::antibody::GraftCDRLoopsProtocol , protocols::antibody_legacy::AntibodyModeler , protocols::antibody_legacy::GraftMover
• graft_mover_ : protocols::antibody::design::AntibodyGraftDesignMover
• graft_rounds_ : protocols::antibody::design::AntibodyGraftDesignMover
• graft_sequence_ : protocols::antibody::GraftCDRLoopsProtocol
• greedy_ : protocols::rbsegment_relax::OptimizeThreadingMover
• grid_ : protocols::ligand_docking::Translate , protocols::match::Bool3DGrid , protocols::match::downstream::ActiveSiteGrid , protocols::pockets::ComparisonGrid , protocols::pockets::PocketGrid , protocols::qsar::RenderGridsToKinemage , protocols::qsar::scoring_grid::SingleGrid
• grid_atom_name_1_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_atom_name_1_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_1_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_1_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_1_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_2_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_atom_name_2_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_2_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_2_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_atom_name_2_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_cone_angle_cutoff_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_cone_angle_cutoff_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_cone_angle_cutoff_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_cone_angle_cutoff_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_cone_angle_cutoff_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_creator_map_ : protocols::qsar::scoring_grid::GridFactory
• grid_edge_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_edge_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_edge_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_edge_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_edge_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_indices_ : protocols::qsar::qsarOptFunc
• grid_k_vector_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_k_vector_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_k_vector_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_k_vector_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_k_vector_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_large_cutoff_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_large_cutoff_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_large_cutoff_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_large_cutoff_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_large_cutoff_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_map_ : protocols::qsar::scoring_grid::GridManager , protocols::qsar::scoring_grid::SolvationMetaGrid
• grid_map_cache_ : protocols::qsar::scoring_grid::GridManager
• grid_max_ : protocols::canonical_sampling::BiasEnergy::Histogram< T >
• grid_min_ : protocols::canonical_sampling::BiasEnergy::Histogram< T >
• grid_name_ : protocols::qsar::RenderGridsToKinemage
• grid_output_file_ : protocols::canonical_sampling::BiasEnergy
• grid_residue_num_1_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_residue_num_1_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_1_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_1_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_1_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_2_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_residue_num_2_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_2_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_2_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_residue_num_2_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_s_p_all_ : protocols::scoring::methods::pcs2::PcsGridSearchParameterManager
• grid_small_cutoff_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_small_cutoff_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_small_cutoff_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_small_cutoff_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_small_cutoff_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_step_ : protocols::scoring::methods::pcs::PCS_Energy_parameters_manager , protocols::scoring::methods::pcsTs1::PCS_Energy_parameters_manager_Ts1 , protocols::scoring::methods::pcsTs2::PCS_Energy_parameters_manager_Ts2 , protocols::scoring::methods::pcsTs3::PCS_Energy_parameters_manager_Ts3 , protocols::scoring::methods::pcsTs4::PCS_Energy_parameters_manager_Ts4
• grid_step_stage1_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_step_stage2_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_step_stage3_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_step_stage4_ : protocols::topology_broker::PseudocontactShiftEnergyController , protocols::topology_broker::PseudocontactShiftEnergyController_Ts1 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts2 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts3 , protocols::topology_broker::PseudocontactShiftEnergyController_Ts4
• grid_weights_ : protocols::qsar::scoring_grid::GridManager
• gridlig_active_site_definition_ : protocols::match::MatcherTask
• gridlig_fname_ : protocols::match::Matcher , protocols::match::MatcherTask
• grids_ : protocols::match::BumpGrid
• grids_to_use_ : protocols::qsar::qsarMover
• group1_ : protocols::toolbox::ResidueGroupIGEdgeUpweighter
• group2_ : protocols::toolbox::ResidueGroupIGEdgeUpweighter
• group_ : protocols::match::output::ResidueKinemageWriter , protocols::match::output::WriteUpstreamHitKinemage
• group_discriminator_ : protocols::simple_moves::GreenPacker
• group_ids_ : protocols::simple_moves::GreenPacker , protocols::simple_moves::UserDefinedGroupDiscriminator
• group_members_ : protocols::simple_moves::GreenPacker
• group_size_ : protocols::cluster::Cluster
• grouper_ : protocols::match::output::CloudPDBWriter , protocols::match::output::MatchConsolidator
• grouper_ds_rmsd_ : protocols::match::MatcherTask
• grouper_name_ : protocols::match::MatcherTask
• groups_ : protocols::toolbox::pose_metric_calculators::InterGroupNeighborsCalculator
• grow_attempts_ : protocols::loops::loop_mover::IndependentLoopMover
• guarded_loops_ : protocols::comparative_modeling::LoopRelaxMover , protocols::loops::loop_mover::LoopMover
• gunn_cost_ : protocols::frag_picker::scores::GunnCostScore
• gzipped_ : protocols::checkpoint::FileBuffer