- _ -

• _RNA_MatchType_ : protocols::farna

- a -

• AddStatus : protocols::optimize_weights
• AlignOption : protocols::hybridization
• AntibodyNumberingSchemeEnum : protocols::antibody
• AntibodyRegionEnum : protocols::antibody
• AttachmentType : protocols::stepwise::monte_carlo

- b -

• BBdisplayState : protocols::viewer::graphics_states_param
• boolean_operations : protocols::filters , protocols::toolbox::task_operations

- c -

• CALIBRATION_ATOM_TYPE : protocols::noesy_assign
• CDRClusterEnum : protocols::antibody::clusters
• CDRDefinitionEnum : protocols::antibody
• CDRLandmarkEnum : protocols::antibody
• CDRNameEnum : protocols::antibody
• ChainDirection : protocols::loops::loop_closure::ccd
• Chirality : protocols::simple_moves::chiral
• ChiStrategy : protocols::match::upstream
• ColorMode : protocols::viewer::graphics_states_param
• ContactType : protocols::frag_picker
• ControlStrength : protocols::environment::claims
• CstAction : protocols::enzdes
• cstType : protocols::jumping

- d -

• DaemonSetMessage : protocols::pack_daemon
• DesignTypeEnum : protocols::antibody::design
• Direction : protocols::rigid
• Distribution : protocols::ligand_docking
• DisulfideCyclizationViability : protocols::simple_moves
• DoFType : protocols::helical_bundle
• dofType : protocols::jumping

- e -

• ec_funcs : protocols::pack_daemon
• Enum : protocols::forge::build::BuildInstructionState , protocols::forge::build::SegmentInsertConnectionScheme , protocols::forge::components::VLB_VallMemoryUsage , protocols::jd2::JobInputterInputSource
• ExternalTransform : protocols::toolbox::match_enzdes_util

- f -

• filter_type : protocols::generalized_kinematic_closure::filter
• FoldTreeRequest : protocols::loop_modeling

- h -

• H3BaseTypeEnum : protocols::antibody
• HBDefType : protocols::features

- i -

• InterfaceRegion : protocols::analysis
• InterpolationType : protocols::canonical_sampling

- k -

• KRSQueryType : protocols::kinmatch

- l -

• LightChainTypeEnum : protocols::antibody
• LookupMode : protocols::indexed_structure_store::filters
• LoopConfiguration : protocols::loops
• LoopRefineInnerCycleName : protocols::loops::loop_mover::refine
• LoopResult : protocols::loops::loop_mover

- m -

• MakeRotLibPolymerType : protocols::make_rot_lib
• MCA : protocols::moves
• MinTypeEnum : protocols::antibody::design
• MoverStatus : protocols::moves
• MoveType : protocols::stepwise::monte_carlo
• mpi_tags : protocols::jd2

- o -

• Operation : protocols::simple_filters
• OptEMultifuncMPIMessages : protocols::optimize_weights
• OptEPositionDataType : protocols::optimize_weights
• OutputLevel : protocols::rotamer_recovery

- p -

• PackingAngleEnum : protocols::antibody
• Partner : protocols::rigid
• PeptideDeriverEntryType : protocols::analysis
• PeptideDeriverReportFormat : protocols::analysis
• PertType : protocols::helical_bundle
• perturber_effect : protocols::generalized_kinematic_closure::perturber
• PhosphateTerminus : protocols::stepwise::modeler::rna::phosphate
• PoseSelectorFlags : protocols::rosetta_scripts
• ProbeRadius : protocols::match

- r -

• RamachandranHash : protocols::features
• RBSegmentType : protocols::rbsegment_relax
• ResidueIdentifier : protocols::loops

- s -

• SCdisplayState : protocols::viewer::graphics_states_param
• SecondaryStructureType : protocols::loops::loop_closure::ccd
• selector_type : protocols::generalized_kinematic_closure::selector
• SeqDesignStrategyEnum : protocols::antibody::design
• SheetFoldType : protocols::fldsgn::topology
• ShowHState : protocols::viewer::graphics_states_param
• SSType : protocols::comparative_modeling::features
• StageID : protocols::abinitio::abscript , protocols::abinitio
• StatsType : protocols::moves
• StepWiseSamplerType : protocols::stepwise::sampler
• StepWiseScreenerType : protocols::stepwise::screener
• StubMode : protocols::cyclic_peptide
• StubStatus : protocols::hotspot_hashing

- t -

• T : protocols::features::RelevantResiduesMode
• TorsionBin : protocols::comparative_modeling::features
• TrajectoryState : protocols::viewer::graphics_states_param

- w -

• WUM_MPI_TAGS : protocols::wum

- x -

• X11Colors : protocols::moves