- s -

• SAMPLE_APPLIER : protocols::stepwise::screener
• SAMPLE_APPLIER_WITH_RESIDUE_LIST : protocols::stepwise::screener
• sample_cis_peptide_bond : protocols::generalized_kinematic_closure::perturber
• SCORER : protocols::stepwise::screener
• SCREENING_FILE : protocols::jd2::JobInputterInputSource
• seq_design_basic : protocols::antibody::design
• seq_design_conservative : protocols::antibody::design
• seq_design_profiles : protocols::antibody::design
• SeqDesignStrategyEnum_total : protocols::antibody::design
• set_bondangle : protocols::generalized_kinematic_closure::perturber
• set_bondlength : protocols::generalized_kinematic_closure::perturber
• set_dihedral : protocols::generalized_kinematic_closure::perturber
• SHOW_ALL_TRIALS : protocols::viewer::graphics_states_param
• SHOW_BACKBONE : protocols::viewer::graphics_states_param
• SHOW_BEST : protocols::viewer::graphics_states_param
• SHOW_CARTOON : protocols::viewer::graphics_states_param
• SHOW_H : protocols::viewer::graphics_states_param
• SHOW_LOW : protocols::viewer::graphics_states_param
• SHOW_MC_TRIALS : protocols::viewer::graphics_states_param
• SHOW_NO_H : protocols::viewer::graphics_states_param
• SHOW_NOBB : protocols::viewer::graphics_states_param
• SHOW_NOSC : protocols::viewer::graphics_states_param
• SHOW_STICK : protocols::viewer::graphics_states_param
• SHOW_WIREFRAME : protocols::viewer::graphics_states_param
• side1 : protocols::analysis
• side2 : protocols::analysis
• SIDECHAIN : protocols::noesy_assign
• SILENT_FILE : protocols::jd2::JobInputterInputSource
• SIMPLE_POSE_SELECTION : protocols::stepwise::screener
• SIMPLE_RMSD : protocols::stepwise::screener
• SIZED : protocols::stepwise::sampler
• SIZED_ANY : protocols::stepwise::sampler
• SIZED_COMB : protocols::stepwise::sampler
• skip_rate : protocols::loops
• spin_down : protocols::pack_daemon
• STAGE_1 : protocols::abinitio
• STAGE_2 : protocols::abinitio
• STAGE_3 : protocols::abinitio
• STAGE_3a : protocols::abinitio
• STAGE_3b : protocols::abinitio
• STAGE_4 : protocols::abinitio
• start : protocols::loops
• start_cdr_loop : protocols::antibody
• stop : protocols::loops
• strand : protocols::loops::loop_closure::ccd
• STUB_APPLIER : protocols::stepwise::screener
• STUB_DISTANCE : protocols::stepwise::screener
• SUBTRACT : protocols::simple_filters
• Success : protocols::loops::loop_mover
• success_message : protocols::pack_daemon
• SUGAR_INSTANTIATOR : protocols::stepwise::screener
• SULPH : protocols::match
• SUM : protocols::simple_filters
• SWITCH_TO_FULLATOM : protocols::abinitio