Here is a list of all namespace members with links to the namespace documentation for each member:
- l -
- L()
: core::scoring::func
, protocols::features
- l1
: protocols::antibody
- L1_10_1
: protocols::antibody::clusters
- L1_10_2
: protocols::antibody::clusters
- L1_11_1
: protocols::antibody::clusters
- L1_11_2
: protocols::antibody::clusters
- L1_11_3
: protocols::antibody::clusters
- L1_12_1
: protocols::antibody::clusters
- L1_12_2
: protocols::antibody::clusters
- L1_12_3
: protocols::antibody::clusters
- L1_13_1
: protocols::antibody::clusters
- L1_13_2
: protocols::antibody::clusters
- L1_14_1
: protocols::antibody::clusters
- L1_14_2
: protocols::antibody::clusters
- L1_15_1
: protocols::antibody::clusters
- L1_15_2
: protocols::antibody::clusters
- L1_16_1
: protocols::antibody::clusters
- L1_17_1
: protocols::antibody::clusters
- l2
: protocols::antibody
- L2_12_1
: protocols::antibody::clusters
- L2_12_2
: protocols::antibody::clusters
- L2_8_1
: protocols::antibody::clusters
- L2_8_2
: protocols::antibody::clusters
- L2_8_3
: protocols::antibody::clusters
- L2_8_4
: protocols::antibody::clusters
- L2_8_5
: protocols::antibody::clusters
- l3
: protocols::antibody
- L3_10_1
: protocols::antibody::clusters
- L3_10_cis7_8_1
: protocols::antibody::clusters
- L3_10_cis8_1
: protocols::antibody::clusters
- L3_11_1
: protocols::antibody::clusters
- L3_11_cis7_1
: protocols::antibody::clusters
- L3_12_1
: protocols::antibody::clusters
- L3_13_1
: protocols::antibody::clusters
- L3_7_1
: protocols::antibody::clusters
- L3_8_1
: protocols::antibody::clusters
- L3_8_2
: protocols::antibody::clusters
- L3_8_cis6_1
: protocols::antibody::clusters
- L3_9_1
: protocols::antibody::clusters
- L3_9_2
: protocols::antibody::clusters
- L3_9_cis6_1
: protocols::antibody::clusters
- L3_9_cis7_1
: protocols::antibody::clusters
- L3_9_cis7_2
: protocols::antibody::clusters
- L3_9_cis7_3
: protocols::antibody::clusters
- l4
: protocols::antibody
- L_AA
: core::chemical
- L_chain_last_loop
: protocols::antibody
- L_CHIRALITY
: protocols::simple_moves::chiral
- L_SS
: protocols::comparative_modeling::features
- L_SUGAR
: core::chemical
- La
: core::chemical::element
- label_atom_name()
: protocols::noesy_assign
- LabelResonanceAP
: protocols::noesy_assign
- LabelResonanceCAP
: protocols::noesy_assign
- LabelResonanceCOP
: protocols::noesy_assign
- LabelResonanceOP
: protocols::noesy_assign
- lambda
: protocols::antibody
- lambda6
: protocols::antibody
- LAMBDA_ATOM
: core::chemical
- LargeFragWeightAP
: protocols::topology_broker::weights
- LargeFragWeightCAP
: protocols::topology_broker::weights
- LargeFragWeightCOP
: protocols::topology_broker::weights
- LargeFragWeightOP
: protocols::topology_broker::weights
- LargeNstructJobInputterAP
: protocols::jd2
- LargeNstructJobInputterCAP
: protocols::jd2
- LargeNstructJobInputterCOP
: protocols::jd2
- LargeNstructJobInputterOP
: protocols::jd2
- largest_continuous_atom_map()
: protocols::sewing
- LarvalJobCOP
: protocols::jd3
- LarvalJobOP
: protocols::jd3
- LarvalJobs
: protocols::jd3
- LAST_ADD_OR_DELETE_CHOICE
: protocols::stepwise::monte_carlo::mover
- last_atomdesc
: core::scoring::rna::chemical_shift
- LAST_ATTACHMENT_TYPE
: protocols::stepwise::monte_carlo::mover
- last_beta3_aa
: core::chemical
- last_D_aa
: core::chemical
- last_DNA_aa
: core::chemical
- LAST_STAGE
: protocols::abinitio
- LAST_TYPE
: core::pose::full_model_info
- LayerDesignOperationOP
: protocols::flxbb
- LayerSelectorCOP
: core::select::residue_selector
- LayerSelectorOP
: core::select::residue_selector
- LazyInteractionGraphCOP
: core::pack::interaction_graph
- LazyInteractionGraphOP
: core::pack::interaction_graph
- LazySilentFileJobInputterOP
: protocols::jd2
- LazySilentFilePoseInputStreamOP
: core::import_pose::pose_stream
- LeastNativeLike9merFilterCOP
: protocols::simple_filters
- LeastNativeLike9merFilterOP
: protocols::simple_filters
- left
: core::sequence
- legacy
: core::scoring::sasa
- LegacyKicSamplerCOP
: protocols::loop_modeling::samplers
- LegacyKicSamplerOP
: protocols::loop_modeling::samplers
- LegacyRootClaimAP
: protocols::topology_broker::claims
- LegacyRootClaimCAP
: protocols::topology_broker::claims
- LegacyRootClaimCOP
: protocols::topology_broker::claims
- LegacyRootClaimOP
: protocols::topology_broker::claims
- LegacyRootClaims
: protocols::topology_broker::claims
- LeGrand
: core::scoring::sasa
- LeGrandSasaCOP
: core::scoring::sasa
- LeGrandSasaOP
: core::scoring::sasa
- Length
: core
- LENGTH_TLC()
: protocols::unfolded_state_energy_calculator
- LengthEventCollectorAP
: core::pose::datacache
- LengthEventCollectorCAP
: core::pose::datacache
- LengthEventCollectorCOP
: core::pose::datacache
- LengthEventCollectorOP
: core::pose::datacache
- LengthGenAP
: core::fragment::picking_old::vall::gen
- LengthGenCAP
: core::fragment::picking_old::vall::gen
- LengthGenCOP
: core::fragment::picking_old::vall::gen
- LengthGenOP
: core::fragment::picking_old::vall::gen
- LengthSquared
: core
- let_rigid_body_jumps_move()
: protocols::farna
- LHRepulsiveRampCOP
: protocols::antibody
- LHRepulsiveRampLegacyCOP
: protocols::antibody
- LHRepulsiveRampLegacyOP
: protocols::antibody
- LHRepulsiveRampOP
: protocols::antibody
- LHSnugFitLegacyCOP
: protocols::antibody
- LHSnugFitLegacyOP
: protocols::antibody
- Li
: core::chemical::element
- lib_full_path()
: protocols::canonical_sampling::mc_convergence_checks
- LIGAND
: core::chemical
, protocols::motifs
- ligand_area_tracer()
: protocols::ligand_docking
- ligand_design_tracer()
: protocols::ligand_docking
- ligand_scores_tracer()
: protocols::ligand_docking
- LigandAreaCOP
: protocols::ligand_docking
- LigandAreaCOPs
: protocols::ligand_docking
- LigandAreaOP
: protocols::ligand_docking
- LigandAreaOPs
: protocols::ligand_docking
- LigandAreas
: protocols::ligand_docking
- LigandBaseProtocolCOP
: protocols::ligand_docking
- LigandBaseProtocolOP
: protocols::ligand_docking
- LigandConformerBuilderCOP
: protocols::match::downstream
- LigandConformerBuilderOP
: protocols::match::downstream
- LigandConformerCOP
: protocols::toolbox::match_enzdes_util
- LigandConformerOP
: protocols::toolbox::match_enzdes_util
- LigandDesignCOP
: protocols::ligand_docking
- LigandDesignOP
: protocols::ligand_docking
- LigandDockMainOP
: protocols::ligand_docking
- LigandDockProtocolCOP
: protocols::ligand_docking
- LigandDockProtocolOP
: protocols::ligand_docking
- LigandMotifSearchCOP
: protocols::motifs
- LigandMotifSearchOP
: protocols::motifs
- LightChainTypeEnum
: protocols::antibody
- LightChainTypeEnum_start
: protocols::antibody
- LightChainTypeEnum_total
: protocols::antibody
- LightWeightResidueGraph
: core::chemical
- limit_chunk_size()
: protocols::nonlocal
- limit_rotamer_set()
: protocols::multistate_design
- LimitAromaChi2_RotamerSetOperationCOP
: protocols::toolbox::task_operations
- LimitAromaChi2_RotamerSetOperationOP
: protocols::toolbox::task_operations
- LimitAromaChi2OperationCOP
: protocols::toolbox::task_operations
- LimitAromaChi2OperationOP
: protocols::toolbox::task_operations
- LimitHitsPerRotamerFilterCOP
: protocols::match::output
- LimitHitsPerRotamerFilterOP
: protocols::match::output
- linear
: protocols::canonical_sampling
- linear_chainbreak
: core::scoring
, protocols::forge::methods
- linear_interpolate()
: core::scoring::constraints
- LinearChainbreakEnergyCreator_registrator
: core::init
- linearize_fold_tree()
: core::kinematics
- LinearMemoryHPatchInteractionGraph
: core::pack::interaction_graph
- LinearMemoryHPatchInteractionGraphOP
: core::pack::interaction_graph
- LinearMemoryInteractionGraphCOP
: core::pack::interaction_graph
- LinearMemoryInteractionGraphOP
: core::pack::interaction_graph
- LinearMemorySurfaceInteractionGraph
: core::pack::interaction_graph
- LinearMemorySurfaceInteractionGraphOP
: core::pack::interaction_graph
- LineMinimizationAlgorithmCOP
: core::optimization
- LineMinimizationAlgorithmOP
: core::optimization
- LINK
: core::io::pdb
- LINKAGE_NA
: core::chemical::carbohydrates
- LinkageConformerMoverCOP
: protocols::carbohydrates
- LinkageConformerMoverOP
: protocols::carbohydrates
- LinkageConformers
: core::chemical::carbohydrates
- LinkageType
: core::chemical::carbohydrates
- linker_count2score()
: protocols::sic_dock
- LinkerScoreCOP
: protocols::sic_dock
- LinkerScoreOP
: protocols::sic_dock
- LinkResiduesCOP
: protocols::toolbox::task_operations
- LinkResiduesOP
: protocols::toolbox::task_operations
- Links
: core::kinematics
- LIPID
: core::chemical
- LipidAccInfoCOP
: core::conformation::membrane
- LipidAccInfoOP
: core::conformation::membrane
- list_amino_acid_options()
: protocols::multistate_design
- LJ
: core::scoring::sasa
- lk_ball
: core::scoring
- LK_BALL_INFO
: core::conformation::residue_datacache
- lk_ball_iso
: core::scoring
- LK_BALL_ROTAMER_SET_INFO
: core::conformation::RotamerSetCacheableDataType
- lk_ball_wtd
: core::scoring
- LK_BallEnergyCreator_registrator
: core::init
- lk_costheta
: core::scoring
- lk_hack
: core::scoring
- LK_hackCreator_registrator
: core::init
- LK_MATCHING_WEIGHT_EXACT
: core::scoring::geometric_solvation
- LK_MATCHING_WEIGHT_OLD_EXACT
: core::scoring::geometric_solvation
- lk_nonpolar
: core::scoring
- lk_nonpolar_intra_RNA
: core::scoring
- lk_polar
: core::scoring
- lk_polar_intra_RNA
: core::scoring
- LK_POLARNONPOLAR_NBLIST
: core::scoring::EnergiesCacheableDataType
- lk_PolarNonPolar_pair_nblist
: core::scoring
- LK_PolarNonPolarEnergyCreator_registrator
: core::init
- LKB_PoseInfo
: core::scoring::lkball
- LKB_PoseInfoOP
: core::scoring::lkball
- lkb_res_data
: core::scoring
- LKB_ResidueInfoCOP
: core::scoring::lkball
- LKB_ResidueInfoOP
: core::scoring::lkball
- lkb_respair_data
: core::scoring
- LKB_ResPairMinDataCOP
: core::scoring::lkball
- LKB_ResPairMinDataOP
: core::scoring::lkball
- LKB_RotamerSetInfo
: core::scoring::lkball
- LKB_RotamerSetInfoOP
: core::scoring::lkball
- LKB_TRIE_COLLECTION
: core::scoring::EnergiesCacheableDataType
- lkball_method
: core::scoring::methods
- LKBRotamerTrieCOP
: core::scoring::lkball::lkbtrie
- LKBRotamerTrieOP
: core::scoring::lkball::lkbtrie
- LnExpressionCOP
: protocols::pack_daemon
- LnExpressionOP
: protocols::pack_daemon
- Lnorm
: protocols::hybridization
- load_avge_polynomial_coefficients()
: protocols::sasa_scores
- load_build_position_data()
: protocols::motifs
- load_checkpoint()
: protocols::dna
- load_component_weights()
: protocols::optimize_weights
- load_coords_and_torsions()
: protocols::loops::loop_closure::ccd
- load_dna_design_defs_from_file()
: protocols::dna
- load_dna_design_defs_from_options()
: protocols::dna
- load_dna_design_defs_from_strings()
: protocols::dna
- load_fastsax_spectrum()
: core::scoring::saxs
- load_form_factors()
: core::scoring::saxs
- load_loop_definitions()
: protocols::loops::loops_definers
- load_motifs()
: core::scoring::motif
- load_poses()
: protocols::simple_filters
- load_s_and_l()
: protocols::jobdist
, protocols::stepwise::sampler::protein
, protocols::stepwise::setup
- load_sasapack_polynomial_coefficients()
: protocols::sasa_scores
- load_unboundrot()
: core::pack::dunbrack
- LoadPDBMoverCOP
: protocols::simple_moves
- LoadPDBMoverOP
: protocols::simple_moves
- LoadUnboundRotMoverCOP
: protocols::simple_moves
- LoadUnboundRotMoverOP
: protocols::simple_moves
- local_count_data
: protocols::stepwise::legacy::modeler::rna
- LocalCoordinateConstraintCOP
: core::scoring::constraints
- LocalCoordinateConstraintCreator_registrator
: core::init
- LocalCoordinateConstraintOP
: core::scoring::constraints
- LocalInserter_SimpleMinCOP
: protocols::loophash
- LocalInserter_SimpleMinOP
: protocols::loophash
- LocalInserterCOP
: protocols::loophash
- LocalInserterOP
: protocols::loophash
- LocalPosition
: core::environment
, protocols::topology_broker::claims
- LocalPositionCOP
: core::environment
- LocalPositionOP
: core::environment
- LocalPositions
: core::environment
- LocalRelaxAP
: protocols::relax
- LocalRelaxCAP
: protocols::relax
- LocalRelaxCOP
: protocols::relax
- LocalRelaxOP
: protocols::relax
- locate_rosetta_database()
: core::init
- logdgaussian()
: core::scoring::constraints
- logdgaussian_deriv()
: core::scoring::constraints
- LogFilePerturberCOP
: protocols::kinematic_closure::perturbers
- LogFilePerturberOP
: protocols::kinematic_closure::perturbers
- LongRangeEnergyType
: core::scoring::methods
- LongRangeTwoBodyEnergyCOP
: core::scoring::methods
- LongRangeTwoBodyEnergyOP
: core::scoring::methods
- look_for_jumps()
: protocols::stepwise::modeler::rna::sugar
- look_for_jumps_to_next()
: protocols::stepwise::modeler::rna::sugar
- look_for_jumps_to_previous()
: protocols::stepwise::modeler::rna::sugar
- look_for_non_jump_reference_to_next()
: protocols::stepwise::modeler::rna::sugar
- look_for_non_jump_reference_to_previous()
: protocols::stepwise::modeler::rna::sugar
- look_for_unique_jump_to_moving_res()
: protocols::stepwise::modeler
- lookup_cp_map()
: core::scoring::trie
- lookup_idx()
: core::scoring::rna::data
- lookup_type_for_orbital_type()
: core::scoring::orbitals
- LookupMode
: protocols::indexed_structure_store::filters
- loop_bump_check
: protocols::generalized_kinematic_closure::filter
- loop_close
: core::scoring
- LOOP_CLOSURE
: protocols::abinitio
- loop_local_rmsd()
: protocols::loops
- loop_mover_from_tag()
: protocols::loop_modeling::utilities
- loop_rmsd()
: protocols::loops
- loop_rmsd_with_superimpose()
: protocols::loops
- loop_rmsd_with_superimpose_core()
: protocols::loops
- loop_start_without_overlap()
: protocols::denovo_design
- loop_stop_comp()
: protocols::abinitio::abscript
- loop_stop_without_overlap()
: protocols::denovo_design
- LoopAAs
: protocols::denovo_design::task_operations
- LoopAnalyzerMoverOP
: protocols::analysis
- LoopAnchorFeaturesCOP
: protocols::features
- LoopAnchorFeaturesOP
: protocols::features
- LoopBuild_main()
: protocols::loop_build
- LoopBuilderCOP
: protocols::loop_modeling
- LoopBuilderOP
: protocols::loop_modeling
- LoopBuildMoverCOP
: protocols::loop_build
- LoopBuildMoverOP
: protocols::loop_build
- LoopCloseEnergyCreator_registrator
: core::init
- LoopClosureCOP
: protocols::loops::loop_closure::ccd
- LoopClosureOP
: protocols::loops::loop_closure::ccd
- LoopCMAP
: protocols::loops::loop_mover
- LoopCMCAP
: protocols::loops::loop_mover
- LoopCMCOP
: protocols::loops::loop_mover
- LoopCMOP
: protocols::loops::loop_mover
- LoopConfiguration
: protocols::loops
- LoopCOP
: core::scoring::loop_graph
, protocols::fldsgn::topology
, protocols::loops
- LoopCycleCOP
: core::scoring::loop_graph
- LoopCycleOP
: core::scoring::loop_graph
- LoopFilterCOP
: protocols::loop_modeling::utilities
- LoopFilterOP
: protocols::loop_modeling::utilities
- loopfinder()
: protocols::loops
- LoopFragmentClaimerAP
: protocols::topology_broker
- LoopFragmentClaimerCAP
: protocols::topology_broker
- LoopFragmentClaimerCOP
: protocols::topology_broker
- LoopFragmentClaimerOP
: protocols::topology_broker
- LoopGraphCOP
: core::scoring::loop_graph
- LoopGraphOP
: core::scoring::loop_graph
- loophash_main()
: protocols::loophash
- LoophashAssemblyMoverCOP
: protocols::sewing
- LoophashAssemblyMoverOP
: protocols::sewing
- LoopHashLibraryCOP
: protocols::loophash
- LoopHashLibraryLoaderCOP
: protocols::loophash
- LoopHashLibraryLoaderOP
: protocols::loophash
- LoopHashLibraryOP
: protocols::loophash
- LoopHashLibraryOptionsCOP
: protocols::loophash
- LoopHashLibraryOptionsOP
: protocols::loophash
- LoopHashRelaxProtocolCOP
: protocols::loophash
- LoopHashRelaxProtocolOP
: protocols::loophash
- LoopHashSamplerCOP
: protocols::loophash
- LoopHashSamplerOP
: protocols::loophash
- LoopInfoVec
: protocols::denovo_design::task_operations
- LoopJumpFoldCstCOP
: protocols::abinitio
- LoopJumpFoldCstOP
: protocols::abinitio
- LoopLengthChangeCOP
: protocols::protein_interface_design::movers
- LoopLengthChangeOP
: protocols::protein_interface_design::movers
- LoopModelerCOP
: protocols::loop_modeling
- LoopModelerOP
: protocols::loop_modeling
- LoopmodelWrapperCOP
: protocols::loop_build
- LoopmodelWrapperOP
: protocols::loop_build
- LoopMover_Perturb_CCDCOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_CCDOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_KICCOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_KICOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_QuickCCD_MovesCOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_QuickCCD_MovesOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_QuickCCDCOP
: protocols::loops::loop_mover::perturb
- LoopMover_Perturb_QuickCCDOP
: protocols::loops::loop_mover::perturb
- LoopMover_Refine_BackrubCOP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_BackrubOP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_CCDAP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_CCDCAP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_CCDCOP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_CCDOP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_KICCOP
: protocols::loops::loop_mover::refine
- LoopMover_Refine_KICOP
: protocols::loops::loop_mover::refine
- LoopMoverAP
: protocols::loops::loop_mover
- LoopMoverCAP
: protocols::loops::loop_mover
- LoopMoverCOP
: protocols::loop_modeling
, protocols::loops::loop_mover
- LoopMoverCOPs
: protocols::loop_modeling
- LoopMoverFromCommandLineCOP
: protocols::protein_interface_design::movers
- LoopMoverFromCommandLineOP
: protocols::protein_interface_design::movers
- LoopMoverGroupCOP
: protocols::loop_modeling::utilities
- LoopMoverGroupOP
: protocols::loop_modeling::utilities
- LoopMoverOP
: protocols::loop_modeling
, protocols::loops::loop_mover
- LoopMoverOPs
: protocols::loop_modeling
- LoopMovers
: protocols::loop_modeling
- LoopOP
: core::scoring::loop_graph
, protocols::fldsgn::topology
, protocols::loops
- LoopPivotsCOP
: protocols::kinematic_closure::pivot_pickers
- LoopPivotsOP
: protocols::kinematic_closure::pivot_pickers
- LoopProtocolCOP
: protocols::loop_modeling
- LoopProtocolOP
: protocols::loop_modeling
- LoopRefineInnerCycleContainerCOP
: protocols::loops::loop_mover::refine
- LoopRefineInnerCycleContainerOP
: protocols::loops::loop_mover::refine
- LoopRefineInnerCycleCOP
: protocols::loops::loop_mover::refine
- LoopRefineInnerCycleName
: protocols::loops::loop_mover::refine
- LoopRefineInnerCycleOP
: protocols::loops::loop_mover::refine
- LoopRelaxMoverCOP
: protocols::comparative_modeling
- LoopRelaxMoverOP
: protocols::comparative_modeling
- LoopRelaxThreadingMoverCOP
: protocols::comparative_modeling
- LoopRelaxThreadingMoverOP
: protocols::comparative_modeling
- LoopRemodelCOP
: protocols::protein_interface_design::movers
- LoopRemodelOP
: protocols::protein_interface_design::movers
- LoopResult
: protocols::loops::loop_mover
- LoopRlxMoverCOP
: protocols::antibody_legacy
- LoopRlxMoverOP
: protocols::antibody_legacy
- Loops
: protocols::fldsgn::topology
- loops_are_closed()
: protocols::comparative_modeling
- loops_around_residues()
: protocols::loops
- loops_from_alignment()
: protocols::comparative_modeling
- loops_from_string()
: protocols::loops
- loops_from_transitive_alignments()
: protocols::comparative_modeling
- loops_set_chainbreak_weight()
: protocols::loops::loop_mover
- loops_set_move_map()
: protocols::loops
- LoopsCOP
: protocols::loops
- LoopScoreInfoCOP
: core::scoring::loop_graph
- LoopScoreInfoOP
: core::scoring::loop_graph
- LoopsDatabaseDefinerCOP
: protocols::loops::loops_definers
- LoopsDatabaseDefinerCreatorCOP
: protocols::loops::loops_definers
- LoopsDatabaseDefinerCreatorOP
: protocols::loops::loops_definers
- LoopsDatabaseDefinerOP
: protocols::loops::loops_definers
- LoopsDefinerCOP
: protocols::loops::loops_definers
- LoopsDefinerCreatorCOP
: protocols::loops::loops_definers
- LoopsDefinerCreatorOP
: protocols::loops::loops_definers
- LoopsDefinerOP
: protocols::loops::loops_definers
- LoopsExplicitDefinerCOP
: protocols::loops::loops_definers
- LoopsExplicitDefinerCreatorCOP
: protocols::loops::loops_definers
- LoopsExplicitDefinerCreatorOP
: protocols::loops::loops_definers
- LoopsExplicitDefinerOP
: protocols::loops::loops_definers
- LoopsFileDataCOP
: protocols::loops
- LoopsFileDataOP
: protocols::loops
- LoopsFileDefinerCOP
: protocols::loops::loops_definers
- LoopsFileDefinerCreatorCOP
: protocols::loops::loops_definers
- LoopsFileDefinerCreatorOP
: protocols::loops::loops_definers
- LoopsFileDefinerOP
: protocols::loops::loops_definers
- LoopsFileFallbackConfigurationCOP
: protocols::loops
- LoopsFileFallbackConfigurationOP
: protocols::loops
- LoopsFileIOCOP
: protocols::loops
- LoopsFileIOOP
: protocols::loops
- LoopsFileLoaderCOP
: protocols::loops
- LoopsFileLoaderOP
: protocols::loops
- LoopsFileOptionsCOP
: protocols::loops
- LoopsFileOptionsOP
: protocols::loops
- LoopsOP
: protocols::loops
- loopstring_to_loopregions()
: protocols::mpi_refinement
- loopstring_to_loopvector()
: protocols::mpi_refinement
- LOWER_TERMINUS
: core::chemical
- LOWER_TERMINUS_VARIANT
: core::chemical
- LOWERTERM_CAP
: core::chemical
- LOWERTERM_TRUNC
: core::chemical
- LOWERTERM_TRUNC_VARIANT
: core::chemical
- lowest_delta_torsion_selector
: protocols::generalized_kinematic_closure::selector
- lowest_energy_selector
: protocols::generalized_kinematic_closure::selector
- lowest_rmsd_selector
: protocols::generalized_kinematic_closure::selector
- Lr
: core::chemical::element
- LREnergyContainerCOP
: core::scoring
- LREnergyContainerOP
: core::scoring
- lsf_normal()
: core::scoring::dna
- lt_OP_deref()
: protocols::genetic_algorithm
- Lu
: core::chemical::element
- Lv
: core::chemical::element
- LW_BaseDoubletOrientation
: core::chemical::rna
- LW_Table
: core::pose::rna
- lwrg_ED
: core::chemical
- lwrg_edge_iter
: core::chemical
- lwrg_out_edge_iter
: core::chemical
- lwrg_out_edge_iter_pair
: core::chemical
- lwrg_VD
: core::chemical
- lwrg_vd_iter
: core::chemical
- lwrg_vd_pair_iter
: core::chemical
- lzs()
: protocols::kinmatch