performance_benchmark.cc File Reference

#include <apps/benchmark/performance/performance_benchmark.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/scoring/Energies.hh>
#include <devel/init.hh>
#include <core/types.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <numeric/random/random.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/exit.hh>
#include <stdio.h>
#include <set>
#include <fstream>
#include <sys/time.h>
#include <sys/resource.h>
#include <apps/benchmark/performance/OptionCollection.bench.hh>
#include <apps/benchmark/performance/score.bench.hh>
#include <apps/benchmark/performance/ScoreEach.bench.hh>
#include <apps/benchmark/performance/ScoreAnalyticEtable.bench.hh>
#include <apps/benchmark/performance/SmallMover.bench.hh>
#include <apps/benchmark/performance/ShearMover.bench.hh>
#include <apps/benchmark/performance/Minimizer.bench.hh>
#include <apps/benchmark/performance/Docking.bench.hh>
#include <apps/benchmark/performance/LigandDock.bench.hh>
#include <apps/benchmark/performance/pdb_io.bench.hh>
#include <apps/benchmark/performance/xml_parsing.bench.hh>
#include <apps/benchmark/performance/FastRelax.bench.hh>
#include <apps/benchmark/performance/InteractionGraph.bench.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>

Functions
int	main (int argc, char *argv[])

Variables
const char	results_filename [] = "./../../../../_performance_"
const char	old_results_filename [] = "./../../../../_old_performance_"
OptionCollectionBenchmark	OptionCollection_ ("basic.options.OptionCollection")
ScoreBenchmark	Score_ ("core.scoring.Score")
SmallMoverBenchmark	SmallMover_ ("protocols.moves.SmallMover")
ShearMoverBenchmark	ShearMover_ ("protocols.moves.ShearMover")
MinimizerBenchmark_dfpmin	Minimizer_dfpmin_ ("protocols.optimization.Minimizer_dfpmin")
MinimizerBenchmark_dfpmin_armijo	MinimizerBenchmark_dfpmin_armijo_ ("protocols.optimization.Minimizer_dfpmin_armijo")
MinimizerBenchmark_dfpmin_armijo_nonmonotone	MinimizerBenchmark_dfpmin_armijo_nonmonotone_ ("protocols.optimization.Minimizer_dfpmin_armijo_nonmonotone")
DockingBenchmark_low	DockingLow ("protocols.docking.DockingLowRes")
DockingBenchmark_high	DockingHigh ("protocols.docking.DockingHighRes")
LigandDockBenchmark	ligand_dock ("protocols.ligand_docking.LigandDockProtocol")
PDB_IOBenchmark	PDB_IO_ ("core.import_pose.pose_from_pdbstring")
XMLParseBenchmark	XMLParseBenchmark_ ("utility_tag_Tag_Create")
int	real_command_line_argc
char **	real_command_line_argv
int	command_line_argc
char **	command_line_argv

Function Documentation

int main	(	int	argc,
		char *	argv[]
	)

References utility::options::OptionCollection::add_relevant(), utility::io::oc::cerr, command_line_argc, command_line_argv, in::path::database(), basic::Error(), PerformanceBenchmark::executeAllBenchmarks(), PerformanceBenchmark::executeOneBenchmark(), basic::options::OptionKeys::in::file::file, utility::file::file_exists(), PerformanceBenchmark::getOneReport(), PerformanceBenchmark::getReport(), devel::init(), utility::excn::EXCN_Base::msg(), name, NEW_OPT, old_results_filename, basic::options::option, basic::options::OptionKeys::canonical_sampling::out::out, real_command_line_argc, real_command_line_argv, basic::options::OptionKeys::ms::checkpoint::rename, basic::options::OptionKeys::in::file::residue_type_set, results_filename, TR, basic::options::OptionKeys::inout::dbms::user, and utility_exit.

Variable Documentation

int command_line_argc

Referenced by core_init_with_additional_options(), and main().

char** command_line_argv

Referenced by core_init_from_string(), core_init_with_additional_options(), and main().

DockingBenchmark_high DockingHigh("protocols.docking.DockingHighRes")

DockingBenchmark_low DockingLow("protocols.docking.DockingLowRes")

LigandDockBenchmark ligand_dock("protocols.ligand_docking.LigandDockProtocol")

MinimizerBenchmark_dfpmin Minimizer_dfpmin_("protocols.optimization.Minimizer_dfpmin")

MinimizerBenchmark_dfpmin_armijo MinimizerBenchmark_dfpmin_armijo_("protocols.optimization.Minimizer_dfpmin_armijo")

MinimizerBenchmark_dfpmin_armijo_nonmonotone MinimizerBenchmark_dfpmin_armijo_nonmonotone_("protocols.optimization.Minimizer_dfpmin_armijo_nonmonotone")

const char old_results_filename[] = "./../../../../_old_performance_"

Referenced by main().

OptionCollectionBenchmark OptionCollection_("basic.options.OptionCollection")

PDB_IOBenchmark PDB_IO_("core.import_pose.pose_from_pdbstring")

int real_command_line_argc

Referenced by main().

char** real_command_line_argv

Referenced by main().

const char results_filename[] = "./../../../../_performance_"

Referenced by main().

ScoreBenchmark Score_("core.scoring.Score")

ShearMoverBenchmark ShearMover_("protocols.moves.ShearMover")

SmallMoverBenchmark SmallMover_("protocols.moves.SmallMover")

XMLParseBenchmark XMLParseBenchmark_("utility_tag_Tag_Create")