- d -

• d2s() : utility::subset_mapping
• data() : basic::datacache::DataCache< Data > , basic::datacache::DiagnosticData , fmt::BasicStringRef< Char > , fmt::BasicWriter< Char > , fmt::FormatInt , numeric::kdtree::KDNode , numeric::kdtree::KDPoint , ObjexxFCL::Fstring , utility::list_element< T > , utility::OrderedTuple< T >
• database_session() : basic::database::DatabaseSessionOptions
• DatabaseIOBenchmark() : DatabaseIOBenchmark
• DatabaseResourceLocator() : basic::resource_manager::locator::DatabaseResourceLocator
• DatabaseResourceLocatorCreator() : basic::resource_manager::locator::DatabaseResourceLocatorCreator
• DatabaseSessionManager() : utility::sql_database::DatabaseSessionManager
• DatabaseSessionOptions() : basic::database::DatabaseSessionOptions
• DatabaseSessionOptionsCreator() : basic::database::DatabaseSessionOptionsCreator
• DataCache() : basic::datacache::DataCache< Data >
• DataMap() : basic::datacache::DataMap
• datatype() : basic::datacache::WriteableCacheableData
• DbBigInt() : basic::database::schema_generator::DbBigInt
• DbDataType() : basic::database::schema_generator::DbDataType
• DbDouble() : basic::database::schema_generator::DbDouble
• DbInteger() : basic::database::schema_generator::DbInteger
• DbMoverMessageListener() : basic::mpi::DbMoverMessageListener
• DbReal() : basic::database::schema_generator::DbReal
• DbText() : basic::database::schema_generator::DbText
• DbTextKey() : basic::database::schema_generator::DbTextKey
• DbUUID() : basic::database::schema_generator::DbUUID
• ddy() : numeric::interpolation::spline::SimpleInterpolator
• deactivate() : utility::Bound< typename > , utility::options::Option , utility::options::ScalarOption , utility::options::ScalarOption_T_< K, T > , utility::options::VariantOption< O > , utility::options::VectorOption , utility::options::VectorOption_T_< K, T >
• deallocate() : fmt::internal::MemoryBuffer< T, SIZE, Allocator > , utility::signals::SignalHub< ResultType, Signal >
• debug_pdb() : numeric::geometry::hashing::xyzStripeHash
• decrease_coval() : utility::heap
• decrement_indentation() : numeric::expression_parser::ASTPrinter
• def() : utility::options::FileOption , utility::options::FileVectorOption , utility::options::PathOption , utility::options::PathVectorOption , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_active() : utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_CCD() : app.pyrosetta_toolkit.modules.protocols.HighResLoopModelingProtocols.HighResLoopModelingProtocols , app.pyrosetta_toolkit.modules.protocols.LowResLoopModelingProtocols.LowResLoopModelingProtocols
• default_generalEvent() : Wrapper_PosePyObserver
• default_inactive() : utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_inactive_error() : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_is_legal() : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_KIC() : app.pyrosetta_toolkit.modules.protocols.HighResLoopModelingProtocols.HighResLoopModelingProtocols , app.pyrosetta_toolkit.modules.protocols.LowResLoopModelingProtocols.LowResLoopModelingProtocols
• default_lvalue_reference_return_value_policy() : binder::Config
• default_obeys_bounds() : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_options() : basic::database::DatabaseSessionLoader , basic::resource_manager::ResourceLoader
• default_pointer_return_value_policy() : binder::Config
• default_rvalue_reference_return_value_policy() : binder::Config
• default_size() : utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VariantOption< O > , utility::options::VectorOption_T_< K, T >
• default_size_ok() : utility::options::VectorOption_T_< K, T >
• default_string() : utility::options::BooleanOption , utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_to() : utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T >
• default_value() : utility::options::FileOption , utility::options::FileVectorOption , utility::options::PathOption , utility::options::PathVectorOption , utility::options::ScalarOption_T_< K, T > , utility::options::VectorOption_T_< K, T > , utility::tag::XMLSchemaAttribute
• defines_intrares_energy() : test.T870_SubClassing_EnergyMethods2.CD2B_Method , test.T870_SubClassing_EnergyMethods2.CI2B_Method , test.Workshop9_my_shapes.CI2BScoreMethod
• definition() : utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
• deg2rad() : numeric::NumericTraits< T > , numeric::NumericTraits< double > , numeric::NumericTraits< float > , numeric::NumericTraits< long double >
• degree() : numeric::Polynomial_1d
• degrees_to_radians() : numeric::NumericTraits< T > , numeric::NumericTraits< double > , numeric::NumericTraits< float > , numeric::NumericTraits< long double >
• del_row() : app.pyrosetta_toolkit.modules.prettytable.prettytable.PrettyTable
• delAccessory() : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• Delete() : Delete
• delete_contents_at_nread_limit() : utility::io::FileContentsMap
• delete_file_contents() : utility::io::FileContentsMap
• DemoBase() : DemoBase
• DemoDerived() : DemoDerived
• densities() : numeric::interpolation::Histogram< typename, typename >
• dependencies() : binder::Binder , binder::ClassBinder
• depth() : basic::Emitter
• DereferenceIterator() : utility::DereferenceIterator< Container >
• derivative() : numeric::interpolation::Histogram< typename, typename >
• Derivative() : numeric::interpolation::spline::CubicSpline
• derivative_linear() : numeric::interpolation::Histogram< typename, typename >
• descend_resolver() : yaml.resolver.BaseResolver
• description() : utility::options::Option , utility::options::ScalarOption_T_< K, T > , utility::options::VariantOption< O > , utility::options::VectorOption_T_< K, T > , utility::tag::XMLSchemaAttribute
• descriptor() : fmt::File
• deserialize() : numeric::interpolation::spline::CompoundInterpolator , numeric::interpolation::spline::Interpolator , numeric::interpolation::spline::SimpleInterpolator
• deserialize_data() : basic::mpi::DbMoverMessageListener
• design_residue() : app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignProtocols
• design_supercharge() : supercharge
• design_supercharge_AvNAPSA() : supercharge
• design_symmetric_homodimer_interface() : zinc1_homodimer_design
• design_symmetric_homodimer_metal_interface() : zinc2_homodimer_design
• DesignBenchmark() : DesignBenchmark
• desRes() : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• destination_size() : utility::subset_mapping
• destroy_char_buffer() : utility::io::ozstream
• destructed() : ObjexxFCL::Dimension , ObjexxFCL::DimensionExpression , ObjexxFCL::DimensionExpressionCon , ObjexxFCL::DimensionExpressionCube , ObjexxFCL::DimensionExpressionDiv , ObjexxFCL::DimensionExpressionMax , ObjexxFCL::DimensionExpressionMin , ObjexxFCL::DimensionExpressionMul , ObjexxFCL::DimensionExpressionPow , ObjexxFCL::DimensionExpressionRef , ObjexxFCL::DimensionExpressionSquare , ObjexxFCL::DimensionExpressionSub , ObjexxFCL::DimensionExpressionSum , ObjexxFCL::DynamicIndexRange , ObjexxFCL::FArray1D< typename > , ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2D< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3D< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4D< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5D< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6D< typename > , ObjexxFCL::FArray6P< typename > , ObjexxFCL::KeyFArray1D< typename > , ObjexxFCL::KeyFArray2D< typename > , ObjexxFCL::KeyFArray3D< typename > , ObjexxFCL::KeyFArray4D< typename > , ObjexxFCL::KeyFArray5D< typename > , ObjexxFCL::KeyFArray6D< typename > , ObjexxFCL::Observer
• det() : numeric::xyzMatrix< typename >
• detach() : ObjexxFCL::CArrayP< typename > , ObjexxFCL::FArray1A< typename > , ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2A< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3A< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4A< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5A< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6A< typename > , ObjexxFCL::FArray6P< typename > , ObjexxFCL::FArray< typename >
• determine_encoding() : yaml.reader.Reader
• dF() : numeric::interpolation::spline::CubicSpline
• dFdall() : numeric::interpolation::spline::PolycubicSpline
• dFdx() : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::TricubicSpline
• dFdxi() : numeric::interpolation::spline::PolycubicSpline
• dFdy() : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::TricubicSpline
• dFdz() : numeric::interpolation::spline::TricubicSpline
• diag() : numeric::xyzMatrix< typename > , ObjexxFCL::FArray2D< typename > , ObjexxFCL::KeyFArray2D< typename >
• DiagnosticData() : basic::datacache::DiagnosticData
• die_for_unaccessed_options() : utility::tag::Tag
• die_for_unaccessed_options_recursively() : utility::tag::Tag
• differentiate() : numeric::expression_parser::AbsoluteValueExpression , numeric::expression_parser::AddExpression , numeric::expression_parser::AndExpression , numeric::expression_parser::DivideExpression , numeric::expression_parser::EqualsExpression , numeric::expression_parser::Expression , numeric::expression_parser::GT_Expression , numeric::expression_parser::GTE_Expression , numeric::expression_parser::ITEExpression , numeric::expression_parser::LiteralExpression , numeric::expression_parser::LT_Expression , numeric::expression_parser::LTE_Expression , numeric::expression_parser::MaxExpression , numeric::expression_parser::MetaMaxExpression , numeric::expression_parser::MetaMinExpression , numeric::expression_parser::MinExpression , numeric::expression_parser::MultiplyExpression , numeric::expression_parser::NotExpression , numeric::expression_parser::OrExpression , numeric::expression_parser::SquarerootExpression , numeric::expression_parser::SubtractExpression , numeric::expression_parser::VariableExpression
• dim() : ObjexxFCL::FArray1A< typename > , ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2A< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3A< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4A< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5A< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6A< typename > , ObjexxFCL::FArray6P< typename >
• dim_labels() : numeric::MultiDimensionalHistogram
• Dimension() : ObjexxFCL::Dimension
• dimension() : ObjexxFCL::FArray1A< typename > , ObjexxFCL::FArray1D< typename > , ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2A< typename > , ObjexxFCL::FArray2D< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3A< typename > , ObjexxFCL::FArray3D< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4A< typename > , ObjexxFCL::FArray4D< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5A< typename > , ObjexxFCL::FArray5D< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6A< typename > , ObjexxFCL::FArray6D< typename > , ObjexxFCL::FArray6P< typename > , ObjexxFCL::KeyFArray1D< typename > , ObjexxFCL::KeyFArray2D< typename > , ObjexxFCL::KeyFArray3D< typename > , ObjexxFCL::KeyFArray4D< typename > , ObjexxFCL::KeyFArray5D< typename > , ObjexxFCL::KeyFArray6D< typename >
• dimension_argument() : ObjexxFCL::FArray1A< typename > , ObjexxFCL::FArray2A< typename > , ObjexxFCL::FArray3A< typename > , ObjexxFCL::FArray4A< typename > , ObjexxFCL::FArray5A< typename > , ObjexxFCL::FArray6A< typename >
• dimension_assign() : ObjexxFCL::FArray1< typename > , ObjexxFCL::FArray1A< typename > , ObjexxFCL::FArray1D< typename > , ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2< typename > , ObjexxFCL::FArray2A< typename > , ObjexxFCL::FArray2D< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3< typename > , ObjexxFCL::FArray3A< typename > , ObjexxFCL::FArray3D< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4< typename > , ObjexxFCL::FArray4A< typename > , ObjexxFCL::FArray4D< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5< typename > , ObjexxFCL::FArray5A< typename > , ObjexxFCL::FArray5D< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6< typename > , ObjexxFCL::FArray6A< typename > , ObjexxFCL::FArray6D< typename > , ObjexxFCL::FArray6P< typename > , ObjexxFCL::KeyFArray1D< typename > , ObjexxFCL::KeyFArray2D< typename > , ObjexxFCL::KeyFArray3D< typename > , ObjexxFCL::KeyFArray4D< typename > , ObjexxFCL::KeyFArray5D< typename > , ObjexxFCL::KeyFArray6D< typename >
• dimension_proxy() : ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6P< typename >
• dimension_real() : ObjexxFCL::FArray1D< typename > , ObjexxFCL::FArray2D< typename > , ObjexxFCL::FArray3D< typename > , ObjexxFCL::FArray4D< typename > , ObjexxFCL::FArray5D< typename > , ObjexxFCL::FArray6D< typename > , ObjexxFCL::KeyFArray1D< typename > , ObjexxFCL::KeyFArray2D< typename > , ObjexxFCL::KeyFArray3D< typename > , ObjexxFCL::KeyFArray4D< typename > , ObjexxFCL::KeyFArray5D< typename > , ObjexxFCL::KeyFArray6D< typename >
• DimensionExpression() : ObjexxFCL::DimensionExpression
• DimensionExpressionCon() : ObjexxFCL::DimensionExpressionCon
• DimensionExpressionCube() : ObjexxFCL::DimensionExpressionCube
• DimensionExpressionDiv() : ObjexxFCL::DimensionExpressionDiv
• DimensionExpressionMax() : ObjexxFCL::DimensionExpressionMax
• DimensionExpressionMin() : ObjexxFCL::DimensionExpressionMin
• DimensionExpressionMul() : ObjexxFCL::DimensionExpressionMul
• DimensionExpressionPow() : ObjexxFCL::DimensionExpressionPow
• DimensionExpressionRef() : ObjexxFCL::DimensionExpressionRef
• DimensionExpressionSquare() : ObjexxFCL::DimensionExpressionSquare
• DimensionExpressionSub() : ObjexxFCL::DimensionExpressionSub
• DimensionExpressionSum() : ObjexxFCL::DimensionExpressionSum
• dimensions_initialized() : ObjexxFCL::FArray1A< typename > , ObjexxFCL::FArray1D< typename > , ObjexxFCL::FArray1P< typename > , ObjexxFCL::FArray2A< typename > , ObjexxFCL::FArray2D< typename > , ObjexxFCL::FArray2P< typename > , ObjexxFCL::FArray3A< typename > , ObjexxFCL::FArray3D< typename > , ObjexxFCL::FArray3P< typename > , ObjexxFCL::FArray4A< typename > , ObjexxFCL::FArray4D< typename > , ObjexxFCL::FArray4P< typename > , ObjexxFCL::FArray5A< typename > , ObjexxFCL::FArray5D< typename > , ObjexxFCL::FArray5P< typename > , ObjexxFCL::FArray6A< typename > , ObjexxFCL::FArray6D< typename > , ObjexxFCL::FArray6P< typename > , ObjexxFCL::FArray< typename > , ObjexxFCL::KeyFArray1D< typename > , ObjexxFCL::KeyFArray2D< typename > , ObjexxFCL::KeyFArray3D< typename > , ObjexxFCL::KeyFArray4D< typename > , ObjexxFCL::KeyFArray5D< typename > , ObjexxFCL::KeyFArray6D< typename >
• dimOther() : numeric::fourier::kiss_fftndr_state
• dimprod() : numeric::fourier::kiss_fftnd_state
• dimReal() : numeric::fourier::kiss_fftndr_state
• dims() : numeric::fourier::kiss_fftnd_state
• dims_v() : numeric::fourier::kiss_fftnd_state
• dimsize() : utility::FixedSizeLexicographicalIterator< S > , utility::LexicographicalIterator
• dimsizes() : numeric::geometry::hashing::SixDCoordinateBinner
• disconnect() : utility::signals::SignalHub< ResultType, Signal > , utility::signals::TokenHub< ResultType, Signal >
• disconnect_tokenize() : utility::signals::TokenHub< ResultType, Signal >
• discover_vertex() : utility::graph::HideVertexVisitor< Graph > , utility::graph::null_bfs_prune_visitor
• distance() : numeric::ClusteringTreeNode , numeric::kdtree::KDNode , numeric::kdtree::KDPoint , numeric::xyzTransform< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• distance_cutoff() : numeric::kdtree::KDPointList
• distance_squared() : numeric::xyzTransform< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• distribution() : numeric::random::DistributionSampler< T >
• DistributionSampler() : numeric::random::DistributionSampler< T >
• DivideExpression() : numeric::expression_parser::DivideExpression
• do_get_arg() : fmt::internal::FormatterBase
• do_has_observer() : ObjexxFCL::ObserverMulti
• do_indent() : basic::Emitter , basic::JsonEmitter , basic::YamlEmitter
• do_notify_destructed() : ObjexxFCL::ObserverMulti
• do_remove_observer() : ObjexxFCL::ObserverMulti
• do_shrinking() : Solver , Solver_NU
• DockingBenchmark() : DockingBenchmark< dock, TScale >
• dot() : Kernel , numeric::Quaternion< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• dot_product() : numeric::Quaternion< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• double_msg() : utility::SimulateMPIMessage
• double_of() : ObjexxFCL::Fstring
• doubles_msg() : utility::SimulateMPIMessage
• DougsDockDesignMinimizeMagicMover() : DougsDockDesignMinimizeMagicMover
• draw() : test.Workshop9_my_shapes.MyShape
• dst() : utility::SimulateMPIMessage
• DummyMover() : DummyMover
• dup() : fmt::File
• dup2() : fmt::File
• dynamic_memory_usage() : utility::recent_history_queue
• DynamicIndexRange() : ObjexxFCL::DynamicIndexRange
• DynamicProfileThis() : basic::DynamicProfileThis