 |
Rosetta
3.7
|
- f -
- f()
: A2
, A3
- F()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CubicSpline
, numeric::interpolation::spline::PolycubicSpline
, numeric::interpolation::spline::TricubicSpline
- factors()
: numeric::fourier::kiss_fft_state
- Factory()
: utility::factory::Factory< typename >
- factory_name()
: utility::factory::WidgetFactory< Creator >
- factory_register()
: basic::datacache::WriteableCacheableDataFactory
, basic::resource_manager::FallbackConfigurationFactory
, basic::resource_manager::ResourceLoaderFactory
, basic::resource_manager::ResourceLocatorFactory
, basic::resource_manager::ResourceManagerFactory
, basic::resource_manager::ResourceOptionsFactory
, utility::factory::WidgetFactory< Creator >
- fail()
: utility::io::icstream
, utility::io::irstream
, utility::io::izstream
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
- fallback_specified()
: basic::resource_manager::fallback_configuration::NativeFallbackConfiguration
, basic::resource_manager::FallbackConfiguration
- FallbackConfiguration()
: basic::resource_manager::FallbackConfiguration
- FallbackConfigurationFactory()
: basic::resource_manager::FallbackConfigurationFactory
- FallbackConfigurationRegistrator()
: basic::resource_manager::FallbackConfigurationRegistrator< T >
- FArray()
: ObjexxFCL::FArray< typename >
- FArray1()
: ObjexxFCL::FArray1< typename >
- FArray1A()
: ObjexxFCL::FArray1A< typename >
- FArray1D()
: ObjexxFCL::FArray1D< typename >
- FArray1P()
: ObjexxFCL::FArray1P< typename >
- FArray2()
: ObjexxFCL::FArray2< typename >
- FArray2A()
: ObjexxFCL::FArray2A< typename >
- FArray2D()
: ObjexxFCL::FArray2D< typename >
- FArray2P()
: ObjexxFCL::FArray2P< typename >
- FArray3()
: ObjexxFCL::FArray3< typename >
- FArray3A()
: ObjexxFCL::FArray3A< typename >
- FArray3D()
: ObjexxFCL::FArray3D< typename >
- FArray3P()
: ObjexxFCL::FArray3P< typename >
- FArray4()
: ObjexxFCL::FArray4< typename >
- FArray4A()
: ObjexxFCL::FArray4A< typename >
- FArray4D()
: ObjexxFCL::FArray4D< typename >
- FArray4P()
: ObjexxFCL::FArray4P< typename >
- FArray5()
: ObjexxFCL::FArray5< typename >
- FArray5A()
: ObjexxFCL::FArray5A< typename >
- FArray5D()
: ObjexxFCL::FArray5D< typename >
- FArray5P()
: ObjexxFCL::FArray5P< typename >
- FArray6()
: ObjexxFCL::FArray6< typename >
- FArray6A()
: ObjexxFCL::FArray6A< typename >
- FArray6D()
: ObjexxFCL::FArray6D< typename >
- FArray6P()
: ObjexxFCL::FArray6P< typename >
- FArrayInitializer()
: ObjexxFCL::FArrayInitializer< typename, class >
- FArraySection()
: ObjexxFCL::FArraySection< typename >
- fast_remainder()
: numeric::FastRemainderSelector< T, bool >
, numeric::FastRemainderSelector< T, true >
, ObjexxFCL::FastRemainderSelector< T, bool >
, ObjexxFCL::FastRemainderSelector< T, true >
- FastRelaxPerformanceBenchmark()
: FastRelaxPerformanceBenchmark
- FdF()
: numeric::interpolation::spline::BicubicSpline
, numeric::interpolation::spline::CubicSpline
- fdopen()
: fmt::File
- fetch_alias()
: yaml.scanner.Scanner
- fetch_anchor()
: yaml.scanner.Scanner
- fetch_and_read_pdb_into_database()
: app.pyrosetta_toolkit.modules.SQLPDB.SQLPDB
- fetch_block_entry()
: yaml.scanner.Scanner
- fetch_block_scalar()
: yaml.scanner.Scanner
- fetch_directive()
: yaml.scanner.Scanner
- fetch_document_end()
: yaml.scanner.Scanner
- fetch_document_indicator()
: yaml.scanner.Scanner
- fetch_document_start()
: yaml.scanner.Scanner
- fetch_double()
: yaml.scanner.Scanner
- fetch_flow_collection_end()
: yaml.scanner.Scanner
- fetch_flow_collection_start()
: yaml.scanner.Scanner
- fetch_flow_entry()
: yaml.scanner.Scanner
- fetch_flow_mapping_end()
: yaml.scanner.Scanner
- fetch_flow_mapping_start()
: yaml.scanner.Scanner
- fetch_flow_scalar()
: yaml.scanner.Scanner
- fetch_flow_sequence_end()
: yaml.scanner.Scanner
- fetch_flow_sequence_start()
: yaml.scanner.Scanner
- fetch_folded()
: yaml.scanner.Scanner
- fetch_key()
: yaml.scanner.Scanner
- fetch_literal()
: yaml.scanner.Scanner
- fetch_more_tokens()
: yaml.scanner.Scanner
- fetch_pdb()
: app.pyrosetta_toolkit.window_main.IO.GUIInput.GUIInput
- fetch_plain()
: yaml.scanner.Scanner
- fetch_single()
: yaml.scanner.Scanner
- fetch_stream_end()
: yaml.scanner.Scanner
- fetch_stream_start()
: yaml.scanner.Scanner
- fetch_tag()
: yaml.scanner.Scanner
- fetch_value()
: yaml.scanner.Scanner
- fetchAtoms()
: loadPDB.PDBres
- fetchBB()
: loadPDB.PDBres
- fetchSC()
: loadPDB.PDBres
- File()
: fmt::File
- file_exists()
: utility::Inline_File_Provider
- file_status()
: utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- FileContentsMap()
: utility::io::FileContentsMap
- FileListResourceLocator()
: basic::resource_manager::locator::FileListResourceLocator
- FileListResourceLocatorCreator()
: basic::resource_manager::locator::FileListResourceLocatorCreator
- FileName()
: utility::file::FileName
- filename()
: utility::io::izstream
, utility::io::ozstream
- fileno()
: fmt::BufferedFile
- FileOption()
: utility::options::FileOption
- FileOptionKey()
: utility::options::FileOptionKey
- FileStream()
: basic::resource_manager::locator::FileStream
- FileSystemResourceLocator()
: basic::resource_manager::locator::FileSystemResourceLocator
- FileSystemResourceLocatorCreator()
: basic::resource_manager::locator::FileSystemResourceLocatorCreator
- FileVectorOption()
: utility::options::FileVectorOption
- FileVectorOptionKey()
: utility::options::FileVectorOptionKey
- fill()
: basic::resource_manager::locator::StringResourceStream
, fmt::TypeSpec< TYPE >
, fmt::WidthSpec
- fill_input_buffer()
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- fill_metadata()
: basic::sampling::orientations::QuaternionGridManager
- fill_padding()
: fmt::BasicWriter< Char >
- fill_pairs()
: numeric::geometry::hashing::xyzStripeHash
- filter_clashes()
: zinc2_homodimer_setup
- filter_metal_geom()
: zinc2_homodimer_setup
- final_stream()
: basic::Tracer
- finalize_res_list()
: PhProtocol
- find()
: basic::datacache::WriteableCacheableMap
, fmt::internal::ArgMap< Char >
, ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, utility::keys::ClassKeyMap< K, T, C >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- find_connection()
: utility::signals::SignalHub< ResultType, Signal >
- find_contacts()
: calccontacts.contactProtein
- find_first_not_of()
: ObjexxFCL::Fstring
- find_first_of()
: ObjexxFCL::Fstring
- find_key_cl()
: utility::options::OptionCollection
- find_key_file()
: utility::options::OptionCollection
- find_last()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
- find_last_non_whitespace()
: ObjexxFCL::Fstring
- find_last_not_of()
: ObjexxFCL::Fstring
- find_last_of()
: ObjexxFCL::Fstring
- find_last_whitespace()
: ObjexxFCL::Fstring
- find_midpoint()
: HDmakerMover
- find_non_whitespace()
: ObjexxFCL::Fstring
- find_python_module()
: yaml.constructor.Constructor
- find_python_name()
: yaml.constructor.Constructor
- find_resource()
: basic::resource_manager::LazyResourceManager
, basic::resource_manager::ResourceManager
- find_resource_configuration()
: basic::resource_manager::LazyResourceManager
- find_resource_locator()
: basic::resource_manager::LazyResourceManager
- find_resource_options()
: basic::resource_manager::LazyResourceManager
- find_resource_tag_by_job_tag()
: basic::resource_manager::LazyResourceManager
- find_rosetta_database()
: app.pyrosetta_toolkit.window_modules.options_system.OptionSystemManager.OptionSystemManager
- find_sstream()
: utility::Inline_File_Provider
- find_whitespace()
: ObjexxFCL::Fstring
- finish_indented_line()
: numeric::expression_parser::ASTPrinter
- finish_vertex()
: utility::graph::null_bfs_prune_visitor
- first_bin()
: numeric::interpolation::Histogram< typename, typename >
- first_match()
: numeric::coordinate_fitting::FlatLookup< QueryType, EntryType, Real >
- FitMover()
: FitMover
- fixed_size()
: utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
- FixedBuffer()
: fmt::internal::FixedBuffer< Char >
- fixedsizearray0()
: utility::fixedsizearray0< T, S >
- fixedsizearray0const_iterator()
: utility::fixedsizearray0const_iterator< T, S >
- fixedsizearray0iterator()
: utility::fixedsizearray0iterator< T, S >
- fixedsizearray1()
: utility::fixedsizearray1< T, S >
- fixedsizearray1const_iterator()
: utility::fixedsizearray1const_iterator< T, S >
- fixedsizearray1iterator()
: utility::fixedsizearray1iterator< T, S >
- FixedSizeLexicographicalIterator()
: utility::FixedSizeLexicographicalIterator< S >
- fixonepdb()
: app.pyrosetta_toolkit.window_modules.clean_pdb.FixPDBWindow.FixPDBWindow
- flag()
: fmt::AlignTypeSpec< TYPE >
, fmt::FormatSpec
, fmt::TypeSpec< TYPE >
- flatten_mapping()
: yaml.constructor.SafeConstructor
- float_of()
: ObjexxFCL::Fstring
- flush()
: basic::Emitter
, utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
, utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, utility::io::ocstream
, utility::io::orstream
, utility::io::ozstream
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- flush_all_channels()
: basic::Tracer
- flush_all_tracers()
: basic::Tracer
- flush_final()
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- flush_finalize()
: utility::io::ozstream
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- flush_stream()
: yaml.emitter.Emitter
- FMT_DISALLOW_COPY_AND_ASSIGN()
: fmt::BasicFormatter< Char >
, fmt::BasicWriter< Char >
, fmt::Buffer< T >
, fmt::internal::BasicArgFormatter< Impl, Char >
- foo()
: A
, Access
, B
, Base
, ConstOverload
- foo_int()
: test.T850_SubClassing.A
, utility::py::Base
- foo_member()
: B
- foo_member_const()
: B
- foo_private_not_binded()
: Access
- foo_protected_not_binded()
: Access
- foo_public()
: Access
- foo_static()
: B
- foo_string()
: test.T850_SubClassing.A
, utility::py::Base
- foo_value()
: test.T850_SubClassing.A
, utility::py::Base
- foo_value_sp()
: test.T850_SubClassing.A
, utility::py::Base
- force_commit_transaction()
: utility::sql_database::session
- ForeignKey()
: basic::database::schema_generator::ForeignKey
- format()
: fmt::BasicFormatter< Char >
, fmt::internal::PrintfFormatter< Char >
- format_custom_arg()
: fmt::internal::MakeValue< Char >
- format_decimal()
: fmt::FormatInt
- format_description()
: arls_impl.PreformattedDescFormatter
- format_float()
: fmt::internal::CharTraits< char >
, fmt::internal::CharTraits< wchar_t >
- FormatBuf()
: fmt::internal::FormatBuf< Char >
- FormatError()
: fmt::FormatError
- FormatInt()
: fmt::FormatInt
- FormatSigned()
: fmt::FormatInt
- FormatSpec()
: fmt::FormatSpec
- FormatterBase()
: fmt::internal::FormatterBase
- forward()
: yaml.reader.Reader
- forward_or_cross_edge()
: utility::graph::RingEdgeAnnotationVisitor< Graph, EdgeMap, PathMap >
- forwardS2()
: numeric::fourier::SHT
- FragID()
: FragID
- FragInfo()
: FragInfo
- FragmentAssemblyMover()
: FragmentAssemblyMover
- free_resource()
: basic::resource_manager::ResourceManager
- free_resource_by_job_tag()
: basic::resource_manager::LazyResourceManager
- free_resource_by_tag()
: basic::resource_manager::LazyResourceManager
- fref()
: utility::signals::LinkUnit
- fresh_instance()
: AnchorFinderMover
, CoupledMovesProtocol
, ExemplarMover
, ExposedStrandMover
, ExtractATD
, HDdesignMover
, HDmakerMover
, IAMover
, LigandDockBench
, Minimize
, MyScoreMover
, NCMinimize
, PackingAngle
, PhProtocol
, UBQ_E2Mover
, UBQ_GTPase_disulfide_Mover
, UBQ_GTPaseMover
- from_degrees()
: numeric::EulerAngles< typename >
- from_euler_angles_deg()
: numeric::HomogeneousTransform< T >
, numeric::xyzTransform< typename >
- from_euler_angles_rad()
: numeric::HomogeneousTransform< T >
, numeric::xyzTransform< typename >
- from_four_points()
: numeric::xyzTransform< typename >
- from_quaternion()
: numeric::xyzTransform< typename >
- from_radians()
: numeric::EulerAngles< typename >
- from_rotation_matrix()
: numeric::EulerAngles< typename >
- from_yaml()
: yaml.YAMLObject
- front()
: ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
, utility::keys::ClassKeyVector< K, T, C >
, utility::keys::KeyVector< K, T >
, utility::keys::SmallKeyVector< K, T >
- Fstring()
: ObjexxFCL::Fstring
- Fsubstring()
: ObjexxFCL::Fsubstring
- full_definition()
: utility::tag::XMLSchemaDefinition
- fullRepack()
: app.surface_docking.movers.FullAtomRelax
- function()
: numeric::expression_parser::ArithmeticASTFunction
- Function()
: numeric::interpolation::spline::CubicSpline
- function()
: ObjexxFCL::FArrayInitializer< typename, class >
- FunctionBinder()
: binder::FunctionBinder
- FunctionToken()
: numeric::expression_parser::FunctionToken
- fxn_registry()
: utility::factory::Factory< typename >
- fxn_registry_transfer()
: utility::factory::Factory< typename >