Here is a list of all class members with links to the classes they belong to:
- k -
- k()
: core::scoring::electron_density::OneGaussianScattering
, core::scoring::fiber_diffraction::OneGaussianScattering
- K()
: core::scoring::methods::BBDepCartBondedParameters
, core::scoring::methods::BBIndepCartBondedParameters
, core::scoring::methods::CartBondedParameters
- K0_
: core::scoring::methods::BBIndepCartBondedParameters
- k1
: core::scoring::fiber_diffraction::Hankel
- k2
: core::scoring::fiber_diffraction::Hankel
- K_
: core::scoring::constraints::KofNConstraint
- k_
: core::scoring::func::AmberPeriodicFunc
, core::scoring::func::CharmmPeriodicFunc
, core::scoring::func::PeriodicFunc
- k_angle_
: core::scoring::methods::IdealParametersDatabase
- k_length_
: core::scoring::methods::IdealParametersDatabase
- k_torsion_
: core::scoring::methods::IdealParametersDatabase
- k_torsion_improper_
: core::scoring::methods::IdealParametersDatabase
- k_torsion_proton_
: core::scoring::methods::IdealParametersDatabase
- Kappa()
: core::scoring::FACTSPotential
- Kappa_
: core::scoring::FACTSPotential
- KarplusFunc()
: core::scoring::func::KarplusFunc
- KB_description_
: core::scoring::func::SplineFunc
- kB_T_
: core::scoring::func::GaussianChainDoubleFunc
, core::scoring::func::GaussianChainFunc
, core::scoring::func::GaussianChainQuadrupleFunc
, core::scoring::func::GaussianChainSingleFunc
, core::scoring::func::GaussianChainTripleFunc
- keep_1st_child_pos()
: core::kinematics::tree::Atom
, core::kinematics::tree::BondedAtom
, core::kinematics::tree::JumpAtom
- keep_aas()
: core::pack::task::operation::RestrictAbsentCanonicalAAS
- keep_aas_
: core::pack::task::NOTAA
, core::pack::task::operation::RestrictAbsentCanonicalAAS
- keep_canonical_aas_
: core::pack::task::PIKAA
- keep_chain_and_cutpoint_open_matched()
: core::pose::full_model_info::FullModelParameters
- keep_dof_fixed()
: core::kinematics::tree::Atom
, core::kinematics::tree::Atom_
, core::kinematics::tree::BondedAtom
, core::kinematics::tree::JumpAtom
- keep_input_protonation_state()
: core::io::pdb::FileDataOptions
- keep_input_protonation_state_
: core::io::pdb::FileDataOptions
- keep_nas_
: core::pack::task::PIKNA
- keep_rnas_
: core::pack::task::PIKRNA
- keep_stub_in_residue()
: core::kinematics::Edge
- Key
: core::scoring::motif::MotifHash
, core::scoring::motif::MotifHashManager
, core::scoring::motif::ResPairMotifMetaBinner
, core::scoring::motif::XformScore
, core::scoring::motif::XfragSet
, core::scoring::packing::HolesParams
- key_mask_BB_BB_
: core::scoring::motif::MotifHashManager
- key_set_
: core::scoring::motif::MotifHash
- keyname()
: core::import_pose::PDBSilentStructCreator
, core::io::silent::BinarySilentStructCreator
, core::io::silent::ProteinSilentStruct_SinglePrecCreator
, core::io::silent::ProteinSilentStructCreator
, core::io::silent::RigidBodySilentStructCreator
, core::io::silent::RNA_SilentStructCreator
, core::io::silent::ScoreFileSilentStructCreator
, core::io::silent::ScoreJumpFileSilentStructCreator
, core::io::silent::SilentStructCreator
, core::pack::dunbrack::DunbrackConstraintCreator
, core::pack::task::operation::AddBehaviorRLTCreator
, core::pack::task::operation::AllResFilterCreator
, core::pack::task::operation::AnyResFilterCreator
, core::pack::task::operation::AppendResidueRotamerSetCreator
, core::pack::task::operation::AppendRotamerCreator
, core::pack::task::operation::AppendRotamerSetCreator
, core::pack::task::operation::ChainIsCreator
, core::pack::task::operation::ChainIsntCreator
, core::pack::task::operation::DisallowIfNonnativeCreator
, core::pack::task::operation::DisallowIfNonnativeRLTCreator
, core::pack::task::operation::ExtraChiCutoffCreator
, core::pack::task::operation::ExtraRotamersCreator
, core::pack::task::operation::ExtraRotamersGenericCreator
, core::pack::task::operation::IncludeCurrentCreator
, core::pack::task::operation::InitializeExtraRotsFromCommandlineCreator
, core::pack::task::operation::InitializeFromCommandlineCreator
, core::pack::task::operation::NoRepackDisulfidesCreator
, core::pack::task::operation::NoResFilterCreator
, core::pack::task::operation::OperateOnCertainResiduesCreator
, core::pack::task::operation::OperateOnResidueSubsetCreator
, core::pack::task::operation::OptCysHGCreator
, core::pack::task::operation::OptHCreator
, core::pack::task::operation::PreserveCBetaCreator
, core::pack::task::operation::PreventRepackingCreator
, core::pack::task::operation::PreventRepackingRLTCreator
, core::pack::task::operation::ReadResfileAndObeyLengthEventsCreator
, core::pack::task::operation::ReadResfileCreator
, core::pack::task::operation::ReplicateTaskCreator
, core::pack::task::operation::ResFilterCreator
, core::pack::task::operation::ResidueHasPropertyCreator
, core::pack::task::operation::ResidueIndexIsCreator
, core::pack::task::operation::ResidueIndexIsntCreator
, core::pack::task::operation::ResidueLacksPropertyCreator
, core::pack::task::operation::ResidueName3IsCreator
, core::pack::task::operation::ResidueName3IsntCreator
, core::pack::task::operation::ResiduePDBIndexIsCreator
, core::pack::task::operation::ResiduePDBIndexIsntCreator
, core::pack::task::operation::ResiduePDBInfoHasLabelCreator
, core::pack::task::operation::ResiduePDBInfoLacksLabelCreator
, core::pack::task::operation::ResidueTypeFilterCreator
, core::pack::task::operation::ResLvlTaskOperationCreator
, core::pack::task::operation::RestrictAbsentCanonicalAASCreator
, core::pack::task::operation::RestrictAbsentCanonicalAASRLTCreator
, core::pack::task::operation::RestrictResidueToRepackingCreator
, core::pack::task::operation::RestrictToRepackingCreator
, core::pack::task::operation::RestrictToRepackingRLTCreator
, core::pack::task::operation::RestrictYSDesignCreator
, core::pack::task::operation::RotamerExplosionCreator
, core::pack::task::operation::SetRotamerCouplingsCreator
, core::pack::task::operation::SetRotamerLinksCreator
, core::pack::task::operation::TaskOperationCreator
, core::pack::task::residue_selector::AndResidueSelectorCreator
, core::pack::task::residue_selector::ChainSelectorCreator
, core::pack::task::residue_selector::ClashBasedRepackShellSelectorCreator
, core::pack::task::residue_selector::InterGroupInterfaceByVectorSelectorCreator
, core::pack::task::residue_selector::JumpDownstreamSelectorCreator
, core::pack::task::residue_selector::JumpUpstreamSelectorCreator
, core::pack::task::residue_selector::NeighborhoodResidueSelectorCreator
, core::pack::task::residue_selector::NotResidueSelectorCreator
, core::pack::task::residue_selector::NumNeighborsSelectorCreator
, core::pack::task::residue_selector::OrResidueSelectorCreator
, core::pack::task::residue_selector::ResidueIndexSelectorCreator
, core::pack::task::residue_selector::ResidueSelectorCreator
, core::pack::task::residue_selector::TrueResidueSelectorCreator
, core::scoring::constraints::AmbiguousConstraintCreator
, core::scoring::constraints::AmbiguousNMRConstraintCreator
, core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator
, core::scoring::constraints::AngleConstraintCreator
, core::scoring::constraints::AtomPairConstraintCreator
, core::scoring::constraints::BigBinConstraintCreator
, core::scoring::constraints::ConstraintCreator
, core::scoring::constraints::CoordinateConstraintCreator
, core::scoring::constraints::DihedralConstraintCreator
, core::scoring::constraints::DihedralPairConstraintCreator
, core::scoring::constraints::FabConstraintCreator
, core::scoring::constraints::KofNConstraintCreator
, core::scoring::constraints::LocalCoordinateConstraintCreator
, core::scoring::constraints::MultiConstraintCreator
, core::scoring::constraints::SequenceProfileConstraintCreator
, core::scoring::constraints::SiteConstraintCreator
, core::scoring::constraints::SiteConstraintResiduesCreator
, core::sequence::ChemicalShiftSequenceCreator
, core::sequence::CompositeSequenceCreator
, core::sequence::SequenceCouplingCreator
, core::sequence::SequenceCreator
, core::sequence::SequenceProfileCreator
, core::sequence::SimpleSequenceCreator
- keys()
: core::scoring::motif::MotifHash
- KeySet
: core::scoring::motif::MotifHash
- keyword_in_progress()
: core::io::pdb::HeaderInformation
- keyword_in_progress_
: core::io::pdb::HeaderInformation
- keywords()
: core::io::pdb::HeaderInformation
- Keywords
: core::io::pdb::HeaderInformation
- keywords_
: core::io::pdb::HeaderInformation
- kill_antiparallel()
: core::scoring::SS_Killhairpins_Info
- kill_antiparallel_
: core::scoring::SS_Killhairpins_Info
- kill_parallel()
: core::scoring::SS_Killhairpins_Info
- kill_parallel_
: core::scoring::SS_Killhairpins_Info
- kind
: core::scoring::packstat::Event
- kmax_
: core::scoring::electron_density::ElectronDensity
- kmin_
: core::scoring::electron_density::ElectronDensity
- known_atoms_
: core::scoring::saxs::FormFactorManager
- KofNConstraint()
: core::scoring::constraints::KofNConstraint
- KofNConstraintCreator()
: core::scoring::constraints::KofNConstraintCreator
- KromerMann()
: core::scoring::electron_density::KromerMann
, core::scoring::fiber_diffraction::KromerMann
- Ks_spline_
: core::scoring::methods::BBDepCartBondedParameters
- kstep_
: core::scoring::electron_density::ElectronDensity
- kT()
: core::sequence::MCAligner
- kT_
: core::sequence::MCAligner
- Ktheta()
: core::scoring::mm::MMBondAngleResidueTypeParam
- Ktheta_
: core::scoring::mm::MMBondAngleResidueTypeParam