Here is a list of all class members with links to the classes they belong to:

- l -

• l : core::scoring::fiber_diffraction::Hankel
• L1ScoringScheme() : core::sequence::L1ScoringScheme
• l_ : core::environment::LengthChecker , core::scoring::hbonds::SSWeightParameters
• L_ini_ : core::scoring::TMscore
• label() : core::environment::LocalPosition , core::kinematics::Edge , core::pose::PDBInfo::ResidueRecord
• label_ : core::environment::LocalPosition , core::kinematics::Edge
• label_to_pose_numbers_ : core::environment::SequenceAnnotation
• labels : core::scoring::packstat::PosePackData
• landing_atom() : core::scoring::loop_graph::LoopScoreInfo
• landing_atom_ : core::scoring::loop_graph::LoopScoreInfo
• landing_domain() : core::scoring::loop_graph::Loop
• landing_domain_ : core::scoring::loop_graph::Loop
• landing_pos() : core::scoring::loop_graph::Loop
• landing_pos_ : core::scoring::loop_graph::Loop
• larmord_beta_ : core::scoring::rna::chemical_shift::RNA_ChemicalShiftPotential
• larmord_distance_cutoff_ : core::scoring::rna::chemical_shift::RNA_ChemicalShiftPotential
• last() : core::graph::EdgeList
• last_backbone_atom() : core::chemical::ResidueType , core::conformation::Residue
• last_controlling_chi() : core::chemical::ResidueType
• last_controlling_chi_ : core::chemical::ResidueType
• last_indep_residue_ : core::conformation::symmetry::SymmetryInfo
• last_independent_residue() : core::conformation::symmetry::SymmetryInfo
• last_nbr_ : core::optimization::ParticleSwarmMinimizer
• last_nonempty_bin() : core::scoring::saxs::DistanceHistogram
• last_nonempty_bin_ : core::scoring::saxs::DistanceHistogram
• last_residue() : core::conformation::parametric::Parameters
• last_section() : core::fragment::picking_old::vall::VallLibrary
• lastcol : core::scoring::packstat::SimplePDB_Atom
• lastRes_ : core::scoring::methods::RG_LocalEnergy
• layer_lines_I : core::scoring::fiber_diffraction::FiberDiffraction
• layer_lines_R : core::scoring::fiber_diffraction::FiberDiffraction
• lazily_deleted_edges_present_ : core::graph::UEVertex< V, E >
• lazy_ig() : core::pack::task::PackerTask , core::pack::task::PackerTask_
• lazy_ig_ : core::pack::task::PackerTask_
• LazyEdge() : core::pack::interaction_graph::LazyEdge
• LazyInteractionGraph() : core::pack::interaction_graph::LazyInteractionGraph
• LazyNode() : core::pack::interaction_graph::LazyNode
• LazySilentFilePoseInputStream() : core::import_pose::pose_stream::LazySilentFilePoseInputStream
• lb() : core::scoring::constraints::BoundFunc
• lb_ : core::kinematics::TreeVizBuilder , core::scoring::constraints::BoundFunc
• lbfgs() : core::optimization::Minimizer
• ldsrbb_high_scale_ : core::scoring::hbonds::HBondOptions
• ldsrbb_low_scale_ : core::scoring::hbonds::HBondOptions
• ldsrbb_maxlength_ : core::scoring::hbonds::HBondOptions
• ldsrbb_minlength_ : core::scoring::hbonds::HBondOptions
• leaves_of_jump() : core::conformation::symmetry::SymmData
• lec_order : core::scoring::fiber_diffraction::Hankel
• LeeRichards() : core::scoring::packstat::LeeRichards
• left_ : core::pack::dunbrack::BBIndNRChiSample< P > , core::scoring::interface_::DDPlookup
• left_cdf() : core::scoring::Ramachandran2B
• left_cdf_ : core::scoring::Ramachandran2B
• left_cdf_by_torsion_bin_ : core::scoring::Ramachandran2B
• left_cdf_for_torsion_bin() : core::scoring::Ramachandran2B
• left_ram_probabil_ : core::scoring::Ramachandran2B
• legacy_ : core::scoring::electron_density::ElectronDensity
• LeGrandSasa() : core::scoring::sasa::LeGrandSasa
• len_h_ : core::scoring::hbonds::SSWeightParameters
• len_l_ : core::scoring::hbonds::SSWeightParameters
• lenex_ : core::scoring::ResidualDipolarCoupling
• length() : core::environment::SequenceAnnotation , core::fragment::Frame , core::io::pdb::LinkInformation , core::scoring::loop_graph::LoopScoreInfo , core::sequence::AnnotatedSequence , core::sequence::CompositeSequence , core::sequence::Sequence , core::sequence::SequenceAlignment
• length_ : core::environment::SequenceAnnotation , core::scoring::loop_graph::LoopScoreInfo , core::sequence::AnnotatedSequence
• length_change : core::conformation::signals::LengthEvent
• length_dependent_srbb() : core::scoring::hbonds::HBondOptions
• length_dependent_srbb_ : core::scoring::hbonds::HBondOptions
• length_dependent_srbb_highscale() : core::scoring::hbonds::HBondOptions
• length_dependent_srbb_lowscale() : core::scoring::hbonds::HBondOptions
• length_dependent_srbb_maxlength() : core::scoring::hbonds::HBondOptions
• length_dependent_srbb_minlength() : core::scoring::hbonds::HBondOptions
• LENGTH_EVENT_COLLECTOR : core::pose::datacache::CacheableObserverType
• length_event_link_ : core::pose::datacache::LengthEventCollector , core::pose::datacache::SpecialSegmentsObserver
• length_events_ : core::pose::datacache::LengthEventCollector
• length_obs_hub_ : core::conformation::Conformation
• length_parameter : core::scoring::methods::ResidueCartBondedParameters
• length_parameters() : core::scoring::methods::ResidueCartBondedParameters
• length_params_ : core::scoring::methods::ResidueCartBondedParameters
• LengthChecker() : core::environment::LengthChecker
• LengthEvent : core::conformation::Conformation , core::conformation::signals::LengthEvent
• LengthEventCollector() : core::pose::datacache::LengthEventCollector
• LengthGen() : core::fragment::picking_old::vall::gen::LengthGen
• level_ : core::pack::task::operation::ExtraRotamers
• lg1x_ : core::scoring::motif::ResPairMotif
• lg1y_ : core::scoring::motif::ResPairMotif
• lg1z_ : core::scoring::motif::ResPairMotif
• lg2x_ : core::scoring::motif::ResPairMotif
• lg2y_ : core::scoring::motif::ResPairMotif
• lg2z_ : core::scoring::motif::ResPairMotif
• lg_angles_ : core::pack::interaction_graph::RotamerDots
• lg_masks_ : core::pack::interaction_graph::RotamerDots
• Librarian() : core::fragment::picking_old::concepts::Librarian< Bookmark, ExtentEvaluator, ExtentGenerator, Library >
• libraries_ : core::pack::dunbrack::RotamerLibrary
• libraries_ops_ : core::pack::dunbrack::RotamerLibrary
• Library() : core::fragment::picking_old::concepts::Library< Books >
• library_iterator : core::pack::dunbrack::RotamerLibrary
• LibraryMap : core::pack::dunbrack::RotamerLibrary
• limit() : core::scoring::func::TopOutFunc
• limit_ : core::scoring::func::TopOutFunc
• Line() : core::util::Line
• line_header_ : core::chemical::sdf::MolWriter
• linear_bonded_potential_ : core::scoring::methods::CartesianBondedEnergy
• linear_switch_point : core::scoring::mm::MMLJEnergyTable
• linear_weights_ : core::scoring::ProQPotential
• linear_weights_proq2_ : core::scoring::ProQPotential
• LinearChainbreakEnergy() : core::scoring::methods::LinearChainbreakEnergy
• LinearMemEdge() : core::pack::interaction_graph::LinearMemEdge
• LinearMemNode() : core::pack::interaction_graph::LinearMemNode
• LinearMemoryInteractionGraph() : core::pack::interaction_graph::LinearMemoryInteractionGraph
• LinearPenaltyFunction() : core::scoring::func::LinearPenaltyFunction
• LineMinimizationAlgorithm() : core::optimization::LineMinimizationAlgorithm
• lines_ : core::util::ABEGO
• Link : core::pose::datacache::LengthEventCollector , core::pose::datacache::SpecialSegmentsObserver
• link_map : core::io::pdb::FileData
• link_torsion_vectors() : core::optimization::MinimizerMap , core::optimization::symmetry::SymMinimizerMap , core::pack::scmin::AtomTreeSCMinMinimizerMap , core::pack::scmin::CartSCMinMinimizerMap , core::pack::scmin::SCMinMinimizerMap
• link_vectors() : core::optimization::DOF_Node
• links_ : core::pack::rotamer_set::RotamerLinks
• linmem_ig() : core::pack::task::PackerTask , core::pack::task::PackerTask_
• linmem_ig_ : core::pack::task::PackerTask_
• linmem_ig_history_size() : core::pack::task::PackerTask , core::pack::task::PackerTask_
• linmem_ig_history_size_ : core::pack::task::PackerTask_
• linmem_ig_history_size_at_default_ : core::pack::task::PackerTask_
• linmin() : core::optimization::Minimizer
• lipid_acc_data() : core::conformation::membrane::MembraneInfo
• lipid_acc_data_ : core::conformation::membrane::MembraneInfo
• lipid_burial() : core::conformation::membrane::LipidAccInfo
• lipid_burial_ : core::conformation::membrane::LipidAccInfo
• lipid_exposure() : core::conformation::membrane::LipidAccInfo
• lipid_exposure_ : core::conformation::membrane::LipidAccInfo
• LipidAccInfo() : core::conformation::membrane::LipidAccInfo
• LipidBurial() : core::scoring::MembraneTopology
• LipidBurial_ : core::scoring::MembraneTopology
• LipidExposure() : core::scoring::MembraneTopology
• LipidExposure_ : core::scoring::MembraneTopology
• LipoDefined() : core::scoring::MembraneTopology
• LipoDefined_ : core::scoring::MembraneTopology
• list() : core::scoring::Hairpins
• list_ : core::fragment::VectorCacheUnit< T >
• list_file_names_ : core::io::sequence_comparation::DesignContrast
• list_interface_ : core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator
• lj_hbond_accOch_dis : core::scoring::etable::MembEtable
• lj_hbond_accOch_hdis : core::scoring::etable::MembEtable
• lj_hbond_dis : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_hbond_hdis : core::init::pre_talaris_2013_behavior_settings , core::scoring::etable::Etable , core::scoring::etable::EtableOptions , core::scoring::etable::MembEtable
• lj_hbond_OH_donor_dis : core::init::pre_talaris_2013_behavior_settings , core::scoring::etable::Etable , core::scoring::etable::EtableOptions
• lj_minimum : core::scoring::etable::EtableParamsOnePair
• lj_r12_coeff : core::scoring::etable::EtableParamsOnePair
• lj_r12_coeff_ : core::scoring::etable::Etable
• lj_r6_coeff : core::scoring::etable::EtableParamsOnePair
• lj_r6_coeff_ : core::scoring::etable::Etable
• lj_radius() : core::chemical::AtomType , core::chemical::MMAtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_radius_ : core::chemical::AtomType , core::chemical::MMAtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_sigma_ : core::scoring::etable::Etable
• lj_slope_intercept : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_switch_dis2sigma : core::scoring::etable::Etable , core::scoring::etable::EtableOptions , core::scoring::etable::MembEtable
• lj_switch_intercept : core::scoring::etable::EtableParamsOnePair
• lj_switch_intercept_ : core::scoring::etable::Etable
• lj_switch_sigma2dis : core::scoring::etable::Etable
• lj_switch_slope : core::scoring::etable::EtableParamsOnePair
• lj_switch_slope_ : core::scoring::etable::Etable
• lj_switch_slope_sigma2wdepth : core::scoring::etable::Etable
• lj_switch_value2wdepth : core::scoring::etable::Etable
• lj_three_bond_radius() : core::chemical::MMAtomType
• lj_three_bond_radius_ : core::chemical::MMAtomType
• lj_three_bond_wdepth() : core::chemical::MMAtomType
• lj_three_bond_wdepth_ : core::chemical::MMAtomType
• lj_use_hbond_radii : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_use_lj_deriv_slope : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_use_water_radii : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_val_at_minimum : core::scoring::etable::EtableParamsOnePair
• lj_water_dis : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_water_hdis : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lj_wdepth() : core::chemical::AtomType , core::chemical::MMAtomType , core::scoring::etable::Etable
• lj_wdepth_ : core::chemical::AtomType , core::chemical::MMAtomType , core::scoring::etable::Etable
• ljatr() : core::scoring::etable::Etable
• ljatr_ : core::scoring::etable::Etable , core::scoring::etable::TableLookupEvaluator , core::scoring::rna::RNA_LJ_BaseEnergy
• ljatr_cubic_poly_parameters : core::scoring::etable::EtableParamsOnePair
• ljatr_cubic_poly_xhi : core::scoring::etable::EtableParamsOnePair
• ljatr_cubic_poly_xlo : core::scoring::etable::EtableParamsOnePair
• ljatr_final_weight : core::scoring::etable::EtableParamsOnePair
• ljrep() : core::scoring::etable::Etable
• ljrep_ : core::scoring::etable::Etable , core::scoring::etable::TableLookupEvaluator , core::scoring::rna::RNA_LJ_BaseEnergy
• ljrep_extra_repulsion : core::scoring::etable::EtableParamsOnePair
• ljrep_from_negcrossing : core::scoring::etable::EtableParamsOnePair
• ljrep_linear_ramp_d2_cutoff : core::scoring::etable::EtableParamsOnePair
• LK_BALL_POSE_INFO : core::pose::datacache::CacheableDataType
• lk_ball_prefactor_ : core::scoring::methods::LK_BallEnergy
• LK_BallEnergy() : core::scoring::methods::LK_BallEnergy
• lk_coeff1 : core::scoring::etable::EtableParamsOnePair
• lk_coeff2 : core::scoring::etable::EtableParamsOnePair
• lk_coeff_ : core::scoring::etable::Etable
• lk_dgfree() : core::chemical::AtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lk_dgfree_ : core::chemical::AtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lk_dgrefce() : core::scoring::etable::MembEtable
• lk_dgrefce_ : core::scoring::etable::MembEtable , core::scoring::membrane::FaMPEnvEnergy , core::scoring::methods::Fa_MbenvEnergy
• LK_hack() : core::scoring::methods::LK_hack
• lk_hack_weight_ : core::scoring::methods::LK_hack
• lk_inv_lambda2() : core::scoring::etable::Etable
• lk_inv_lambda2_ : core::scoring::etable::Etable
• lk_lambda() : core::chemical::AtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lk_lambda_ : core::chemical::AtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lk_min_dis2sigma : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lk_min_dis2sigma_value : core::scoring::etable::EtableParamsOnePair
• lk_min_dis2sigma_value_ : core::scoring::etable::Etable
• LK_PolarNonPolarEnergy() : core::scoring::methods::LK_PolarNonPolarEnergy
• LK_SigmoidalFunc() : core::scoring::methods::LK_SigmoidalFunc
• lk_solv_energy_and_deriv() : core::scoring::etable::Etable
• lk_volume() : core::chemical::AtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• lk_volume_ : core::chemical::AtomType , core::scoring::etable::Etable , core::scoring::etable::MembEtable
• LKB_ResidueInfo() : core::scoring::methods::LKB_ResidueInfo
• LKB_ResiduesInfo() : core::scoring::methods::LKB_ResiduesInfo
• LKB_ResPairMinData() : core::scoring::methods::LKB_ResPairMinData
• lmax : core::scoring::fiber_diffraction::FiberDiffraction
• load_APBS_potential() : core::scoring::PoissonBoltzmannPotential
• load_bin_params() : core::scoring::bin_transitions::BinTransitionCalculator
• load_ff() : core::scoring::saxs::FormFactorManager
• load_ff_from_db() : core::scoring::saxs::FormFactorManager
• load_fragment_lookup() : core::indexed_structure_store::StructureStoreManager
• load_larmord_neighbor_atoms() : core::scoring::rna::chemical_shift::RNA_ChemicalShiftPotential
• load_larmord_parameters() : core::scoring::rna::chemical_shift::RNA_ChemicalShiftPotential
• load_larmord_reference_shifts() : core::scoring::rna::chemical_shift::RNA_ChemicalShiftPotential
• load_larmord_weights() : core::scoring::rna::chemical_shift::RNA_ChemicalShiftPotential
• load_menv_info() : core::scoring::membrane::MembraneData
• load_phi_theta_bins() : core::scoring::SecondaryStructurePotential
• load_score_tables() : core::scoring::dna::DNA_BasePotential
• load_weights_file() : core::scoring::ScoreFunctionFactory
• loader_type() : core::chemical::ResidueLoaderCreator , core::conformation::symmetry::SymmDataLoaderCreator , core::import_pose::PoseFromPDBLoaderCreator , core::io::silent::SilentFileLoaderCreator , core::scoring::electron_density::ElectronDensityLoaderCreator , core::scoring::fiber_diffraction::FiberDiffractionLoaderCreator
• loadFiberDiffractionData() : core::scoring::fiber_diffraction::FiberDiffraction
• local2global() : core::kinematics::Stub
• LocalCoordinateConstraint() : core::scoring::constraints::LocalCoordinateConstraint
• LocalCoordinateConstraintCreator() : core::scoring::constraints::LocalCoordinateConstraintCreator
• LocalPosition() : core::environment::LocalPosition
• localstrandpair_penalty_ : core::scoring::SecondaryStructureWeights
• locate_command() : core::pack::task::ResfileContents
• locate_resid() : core::pack::task::ResfileContents
• log_conc_ : core::scoring::methods::IntermolEnergy
• LonePairElectronAffinity : core::chemical::gasteiger::GasteigerAtomTypeData
• LonePairElectronegativityMulliken : core::chemical::gasteiger::GasteigerAtomTypeData
• LonePairIonizationPotential : core::chemical::gasteiger::GasteigerAtomTypeData
• long_range_container() : core::scoring::Energies
• long_range_damping_length : core::scoring::etable::Etable , core::scoring::etable::MembEtable
• long_range_energies_begin() : core::scoring::ScoreFunction
• long_range_energies_end() : core::scoring::ScoreFunction
• long_range_energy_containers_ : core::scoring::Energies
• long_range_interactions_exist() : core::pack::interaction_graph::OnTheFlyEdge , core::pack::interaction_graph::SymmOnTheFlyEdge
• long_range_interactions_exist_ : core::pack::interaction_graph::OnTheFlyEdge , core::pack::interaction_graph::SymmOnTheFlyEdge
• long_range_type() : core::scoring::constraints::ConstraintsEnergy , core::scoring::disulfides::CentroidDisulfideEnergy , core::scoring::disulfides::DisulfideMatchingEnergy , core::scoring::disulfides::FullatomDisulfideEnergy , core::scoring::electron_density::ElecDensAllAtomCenEnergy , core::scoring::electron_density::ElecDensCenEnergy , core::scoring::electron_density::ElecDensEnergy , core::scoring::electron_density::FastDensEnergy , core::scoring::electron_density::PattersonCorrEnergy , core::scoring::electron_density_atomwise::ElecDensAtomwiseEnergy , core::scoring::methods::CartesianBondedEnergy , core::scoring::methods::dfire::DFIRE_Energy , core::scoring::methods::GenBornEnergy , core::scoring::methods::LongRangeTwoBodyEnergy , core::scoring::methods::PoissonBoltzmannEnergy , core::scoring::methods::Rama2BOffsetEnergy , core::scoring::rna::RNA_SuiteEnergy , core::scoring::sym_e::symEnergy
• longestSide() : core::grid::CartGrid< T >
• LongRangeTwoBodyEnergy() : core::scoring::methods::LongRangeTwoBodyEnergy
• look_for_cycles_recursively() : core::scoring::loop_graph::LoopGraph
• lookup() : core::pose::metrics::EnergyDependentCalculator , core::pose::metrics::PoseMetricCalculator , core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator , core::pose::metrics::simple_calculators::InterfaceDeltaEnergeticsCalculator , core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator , core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator , core::pose::metrics::simple_calculators::SasaCalculator2 , core::pose::metrics::simple_calculators::SasaCalculatorLegacy , core::pose::metrics::StructureDependentCalculator , core::scoring::mm::MMBondAngleLibrary , core::scoring::mm::MMBondAngleResidueTypeParamSet , core::scoring::mm::MMBondLengthLibrary , core::scoring::mm::MMLJLibrary , core::scoring::mm::MMTorsionLibrary
• lookup_ : core::indexed_structure_store::FragmentLookup
• lookup_angle() : core::scoring::methods::IdealParametersDatabase
• lookup_angle_legacy() : core::scoring::methods::IdealParametersDatabase
• lookup_bondangle_buildideal() : core::scoring::methods::IdealParametersDatabase
• lookup_bondlength_buildideal() : core::scoring::methods::IdealParametersDatabase
• lookup_closest_fragment() : core::indexed_structure_store::FragmentLookup
• lookup_closest_pose_fragments() : core::indexed_structure_store::FragmentLookup
• lookup_fragment() : core::indexed_structure_store::FragmentLookup
• lookup_length() : core::scoring::methods::IdealParametersDatabase
• lookup_length_legacy() : core::scoring::methods::IdealParametersDatabase
• lookup_pose_fragments() : core::indexed_structure_store::FragmentLookup
• lookup_table_ : core::scoring::interface_::DDPlookup , core::scoring::interface_::DDPscore , core::scoring::nv::NVlookup , core::scoring::nv::NVscore , core::scoring::orbitals::OrbitalsScore
• lookup_three_bond() : core::scoring::mm::MMLJLibrary
• lookup_torsion() : core::scoring::methods::IdealParametersDatabase
• lookup_torsion_legacy() : core::scoring::methods::IdealParametersDatabase
• loop() : core::optimization::GA_Minimizer
• Loop() : core::scoring::loop_graph::Loop
• loop() : core::scoring::loop_graph::LoopCycle
• loop_cycles_ : core::scoring::loop_graph::LoopGraph
• loop_fixed_cost_ : core::scoring::func::GaussianChainDoubleFunc , core::scoring::func::GaussianChainFunc , core::scoring::func::GaussianChainQuadrupleFunc , core::scoring::func::GaussianChainSingleFunc , core::scoring::func::GaussianChainTripleFunc , core::scoring::loop_graph::LoopGraph
• loop_fixed_cost_total_ : core::scoring::func::GaussianChainDoubleFunc , core::scoring::func::GaussianChainQuadrupleFunc , core::scoring::func::GaussianChainSingleFunc , core::scoring::func::GaussianChainTripleFunc
• loop_fraction() : core::fragment::SecondaryStructure
• loop_fraction_ : core::fragment::SecondaryStructure
• loop_graph_ : core::scoring::loop_graph::LoopCloseEnergy
• loop_incident() : core::graph::Node
• loop_incident_ : core::graph::Node
• loop_score_info() : core::scoring::loop_graph::LoopGraph
• loop_suites() : core::scoring::loop_graph::LoopGraph
• loop_visited_ : core::scoring::loop_graph::LoopGraph
• LoopCloseEnergy() : core::scoring::loop_graph::LoopCloseEnergy
• LoopCycle() : core::scoring::loop_graph::LoopCycle
• LoopGraph() : core::scoring::loop_graph::LoopGraph
• loops_ : core::scoring::loop_graph::LoopCycle , core::scoring::loop_graph::LoopGraph
• loops_from_domain_ : core::scoring::loop_graph::LoopGraph
• LoopScoreInfo() : core::scoring::loop_graph::LoopScoreInfo
• low_EMap_ : core::scoring::constraints::AmbiguousConstraint
• low_poly_ : core::scoring::etable::coulomb::Coulomb
• low_poly_end2_ : core::scoring::etable::coulomb::Coulomb
• low_poly_end_ : core::scoring::etable::coulomb::Coulomb
• low_poly_start2_ : core::scoring::etable::coulomb::Coulomb
• low_poly_start_ : core::scoring::etable::coulomb::Coulomb
• low_temp() : core::pack::task::PackerTask , core::pack::task::PackerTask_
• low_temp_ : core::pack::task::PackerTask_
• low_temp_annealing_ : core::pack::annealer::SimAnnealerBase
• low_total_cst_score_ : core::scoring::constraints::AmbiguousConstraint
• lower : core::chemical::sdf::BondData
• lower_bound() : core::scoring::PoissonBoltzmannPotential
• lower_bound_ : core::scoring::nv::NVscore , core::scoring::PoissonBoltzmannPotential
• lower_bound_dy_ : core::scoring::func::SplineFunc
• lower_bound_squared_ : core::scoring::nv::NVscore
• lower_bound_x_ : core::scoring::func::SplineFunc
• lower_bound_y_ : core::scoring::func::SplineFunc
• lower_connect() : core::chemical::ResidueType , core::conformation::Residue
• lower_connect_angle_params() : core::scoring::methods::ResidueCartBondedParameters
• lower_connect_angle_params_ : core::scoring::methods::ResidueCartBondedParameters
• lower_connect_atom() : core::chemical::ResidueType , core::conformation::Residue
• lower_connect_id() : core::chemical::ResidueType
• lower_connect_id_ : core::chemical::ResidueType
• lower_edge_list_begin() : core::graph::Node
• lower_edge_list_end() : core::graph::Node
• lower_neighbor_id() : core::scoring::constraints::CstResNeighbConstIterator , core::scoring::constraints::CstResNeighbIterator , core::scoring::DenseNeighborConstIterator , core::scoring::DenseNeighborIterator , core::scoring::disulfides::CentroidDisulfideEnergyContainer , core::scoring::disulfides::CentroidDisulfideNeighborConstIterator , core::scoring::disulfides::CentroidDisulfideNeighborIterator , core::scoring::disulfides::DisulfideMatchingEnergyContainer , core::scoring::disulfides::DisulfideMatchingNeighborConstIterator , core::scoring::disulfides::DisulfideMatchingNeighborIterator , core::scoring::disulfides::DisulfResNeighbConstIterator , core::scoring::disulfides::DisulfResNeighbIterator , core::scoring::disulfides::FullatomDisulfideEnergyContainer , core::scoring::OneToAllNeighborConstIterator , core::scoring::OneToAllNeighborIterator , core::scoring::PeptideBondedNeighborConstIterator , core::scoring::PeptideBondedNeighborIterator , core::scoring::ResidueNeighborConstIterator , core::scoring::ResidueNeighborIterator
• lower_range_dof_jumps1_ : core::conformation::symmetry::SymDof
• lower_range_dof_jumps2_ : core::conformation::symmetry::SymDof
• lower_vertex_ : core::graph::UEEdge< V, E >
• lowres_cut : core::scoring::electron_density::ElectronDensity
• lowtemp : core::pack::annealer::SimAnnealerBase
• lowtemp_ : core::pack::annealer::SimAnnealerBase
• lr() : core::conformation::PseudoBond
• LR_2B_MethodIterator : core::scoring::ScoreFunction
• LR_2B_Methods : core::scoring::ScoreFunction
• lr_2b_methods_ : core::scoring::ScoreFunction
• lr_As_ : core::scoring::CenHBPotential
• LR_AtomData() : core::scoring::packstat::LR_AtomData
• lr_conn_ : core::conformation::PseudoBond
• lr_conn_id() : core::conformation::PseudoBond
• LR_MP_AtomData() : core::scoring::packstat::LR_MP_AtomData
• lr_mus_ : core::scoring::CenHBPotential
• lr_resconnid() : core::conformation::PseudoBond
• lr_sigmas_ : core::scoring::CenHBPotential
• LW_orientation : core::pose::rna::BasePair
• lX_ : core::grid::CartGrid< T >
• lY_ : core::grid::CartGrid< T >
• lZ_ : core::grid::CartGrid< T >