- f -

F : core::chemical::element
fa_atr : core::scoring
fa_atr_dummy : core::scoring
fa_atr_ref : core::scoring
fa_cust_pair_dist : core::scoring
fa_custom_pair_dist_data : core::scoring
fa_disulfide_energy : core::scoring::methods
fa_dslf_respair_data : core::scoring
fa_dun : core::scoring
fa_dun_dev : core::scoring
fa_dun_dev_ref : core::scoring
fa_dun_ref : core::scoring
fa_dun_rot : core::scoring
fa_dun_rot_ref : core::scoring
fa_dun_semi : core::scoring
fa_dun_semi_ref : core::scoring
fa_elec : core::scoring
fa_elec_aro_all : core::scoring
fa_elec_aro_aro : core::scoring
fa_elec_bb_bb : core::scoring
fa_elec_bb_sc : core::scoring
fa_elec_ref : core::scoring
fa_elec_rna_base_base : core::scoring
fa_elec_rna_base_base_fast : core::scoring
fa_elec_rna_phos_base : core::scoring
fa_elec_rna_phos_base_fast : core::scoring
fa_elec_rna_phos_phos : core::scoring
fa_elec_rna_phos_phos_fast : core::scoring
fa_elec_rna_phos_sugr : core::scoring
fa_elec_rna_phos_sugr_fast : core::scoring
fa_elec_rna_sugr_base : core::scoring
fa_elec_rna_sugr_base_fast : core::scoring
fa_elec_rna_sugr_sugr : core::scoring
fa_elec_rna_sugr_sugr_fast : core::scoring
fa_elec_sc_sc : core::scoring
fa_grpelec : core::scoring
fa_intra_atr : core::scoring
fa_intra_atr_nonprotein : core::scoring
fa_intra_atr_ref : core::scoring
fa_intra_atr_xover4 : core::scoring
fa_intra_elec : core::scoring
fa_intra_rep : core::scoring
fa_intra_rep_nonprotein : core::scoring
fa_intra_rep_ref : core::scoring
fa_intra_rep_xover4 : core::scoring
fa_intra_RNA_base_phos_atr : core::scoring
fa_intra_RNA_base_phos_rep : core::scoring
fa_intra_RNA_base_phos_sol : core::scoring
fa_intra_sol : core::scoring
fa_intra_sol_nonprotein : core::scoring
fa_intra_sol_ref : core::scoring
fa_intra_sol_xover4 : core::scoring
fa_mbenv : core::scoring
fa_mbsolv : core::scoring
fa_pair : core::scoring
fa_pair_aro_aro : core::scoring
fa_pair_aro_pol : core::scoring
fa_pair_pol_pol : core::scoring
fa_rep : core::scoring
fa_rep_dummy : core::scoring
fa_rep_ref : core::scoring
FA_REP_SCORE : core::conformation::symmetry
fa_sasa : core::scoring
fa_sol : core::scoring
fa_sol_dummy : core::scoring
fa_sol_ref : core::scoring
fa_stack : core::scoring
fa_stack_aro : core::scoring
fa_stack_ext : core::scoring
fa_stack_lower : core::scoring
fa_stack_lr : core::scoring
FA_STACK_NBLIST : core::scoring::EnergiesCacheableDataType
fa_stack_pair_nblist : core::scoring
fa_stack_rna_protein : core::scoring
fa_stack_rna_protein_aro : core::scoring
fa_stack_sol : core::scoring
fa_stack_upper : core::scoring
fa_vdw_tinker : core::scoring
fa_water_to_bilayer : core::scoring
facts_elec : core::scoring
FACTS_ROTAMER_SET_INFO : core::conformation::RotamerSetCacheableDataType
facts_sasa : core::scoring
facts_solv : core::scoring
FAIL : protocols::moves
FAIL_BAD_INPUT : protocols::moves
FAIL_DO_NOT_RETRY : protocols::moves
FAIL_RETRY : protocols::moves
FAILED : protocols::monte_carlo
Failure : protocols::loops::loop_mover
FaMPEnv : core::scoring
FaMPEnvSmooth : core::scoring
FaMPSolv : core::scoring
FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE : protocols::stepwise::screener
FAST_FORWARD_TO_NEXT_RIGID_BODY : protocols::stepwise::screener
fastsaxs : core::scoring
Fd_like : protocols::fldsgn::topology
Fe : core::chemical::element
FE2_COORDINATION : core::chemical
FE3_COORDINATION : core::chemical
FIBER_DIFFRACTION : core::io::rcsb
fiberdiffraction : core::scoring
fiberdiffractiondens : core::scoring
FINISHED : protocols::monte_carlo
First : protocols::indexed_structure_store::filters
FIRST_ATOM_PROPERTY : core::chemical
first_beta3_aa : core::chemical
first_D_aa : core::chemical
first_DNA_aa : core::chemical
first_l_aa : core::chemical
FIRST_LINK_TYPE : core::scoring::carbohydrates
first_oligourea : core::chemical
FIRST_PROPERTY : core::chemical
FIRST_VARIANT : core::chemical
FIVE_PRIME : core::pose::rna
FIVE_PRIME_END_OH : core::chemical
FIVE_PRIME_END_PHOSPHATE : core::chemical
FIVE_PRIME_PACKABLE_PHOSPHATE : core::chemical
FIVE_PRIME_PACKABLE_TRIPHOSPHATE : core::chemical
FIVE_PRIME_PHOSPHATE : core::chemical , protocols::stepwise::modeler::rna::phosphate
FIVE_PRIME_RME_PHOSPHATE : core::chemical
FIVE_PRIME_THIOETHANOLAMINE_PHOSPHATE : core::chemical
FIVEPRIME_CAP : core::chemical , core::pose::full_model_info
FIXED_DOMAIN : core::pose::full_model_info
Fl : core::chemical::element
flat_d_aa_ramatable : core::scoring
flat_d_aa_ramatable_stringent : core::scoring
flat_l_aa_ramatable : core::scoring
flat_l_aa_ramatable_stringent : core::scoring
flat_symm_dl_aa_ramatable : core::scoring
flat_symm_dl_aa_ramatable_stringent : core::scoring
flat_symm_gly_ramatable : core::scoring
flat_symm_gly_ramatable_stringent : core::scoring
flat_symm_pro_ramatable : core::scoring
flat_symm_pro_ramatable_stringent : core::scoring
Flavodoxin : protocols::fldsgn::topology
FLIP_CHIRALITY : protocols::simple_moves::chiral
FLORECENCE_TRANSFER : core::io::rcsb
FLUORO_SUGAR : core::chemical
Fm : core::chemical::element
follow_EX_flags : protocols::match::upstream
FORCE_EXISTING_BASE_TYPE : core::pack::palette
FORMUL : core::io::pdb
forward : protocols::carbohydrates , protocols::loops::loop_closure::ccd
Fr : core::chemical::element
FRAGMENT : core::chemical
framework_region : protocols::antibody
free_2HOprime : core::scoring
free_base : core::scoring
free_dof : core::scoring
free_res : core::scoring
free_side_chain : core::scoring
free_suite : core::scoring
FROM_SCRATCH : protocols::stepwise::monte_carlo::mover
FTR_DONT_CARE : protocols::loop_modeling
FTR_LOOPS_WITH_CUTS : protocols::loop_modeling
FTR_SIMPLE_TREE : protocols::loop_modeling
FULL_ATOM_t : core::chemical
func_add_resid_to_entity_list : protocols::pack_daemon
func_entity_for_residue : protocols::pack_daemon
func_n_residues_for_entity : protocols::pack_daemon
func_residues_for_entity_begin : protocols::pack_daemon
func_residues_for_entity_end : protocols::pack_daemon
FURANOSE : core::chemical