- n -

• N : core::chemical::element , protocols::forge::build::SegmentInsertConnectionScheme
• n2c : protocols::rigid
• N_ACETYLATION : core::chemical
• N_ATOM_PROPERTIES : core::chemical
• n_cacheable_types : core::conformation::residue_datacache
• n_chain_directions : protocols::loops::loop_closure::ccd
• n_ci_2b_score_types : core::scoring
• n_daemon_set_messages : protocols::pack_daemon
• n_energy_method_types : core::scoring::methods
• n_energy_methods : core::scoring::methods
• n_external_transforms : protocols::toolbox::match_enzdes_util
• n_fold_types : protocols::fldsgn::topology
• N_FORMYLATION : core::chemical
• n_hb_atoms : core::scoring::hbonds
• N_LINK_TYPES : core::scoring::carbohydrates
• n_linked_basic_enhanced : protocols::carbohydrates
• n_linked_best_enhanced : protocols::carbohydrates
• n_linked_typical : protocols::carbohydrates
• n_long_range_types : core::scoring::methods
• N_METHYLATED : core::chemical
• N_METHYLATION : core::chemical
• n_min_pair_data : core::scoring
• n_min_single_data : core::scoring
• N_OMEGA_PREFERENCE_TYPES : core::scoring::carbohydrates
• n_optE_data_types : protocols::optimize_weights
• N_p_sp2 : core::chemical::orbitals
• N_pi_sp2 : core::chemical::orbitals
• n_ppo_torsion_bins : core::conformation
• n_probe_radii : protocols::match
• N_PROPERTIES : core::chemical
• N_RECORD_TYPES : core::io::pdb
• n_res_eq : core::simple_metrics::metrics
• n_res_gt : core::simple_metrics::metrics
• n_res_gt_or_eq : core::simple_metrics::metrics
• n_res_lt : core::simple_metrics::metrics
• n_res_lt_or_eq : core::simple_metrics::metrics
• n_res_ne : core::simple_metrics::metrics
• n_score_types : core::scoring
• n_secondary_structure_types : protocols::loops::loop_closure::ccd
• n_shortranged_2b_score_types : core::scoring
• n_ss_types : protocols::comparative_modeling::features
• n_torsion_bins : protocols::comparative_modeling::features
• N_VARIANTS : core::chemical
• Na : core::chemical::element
• NA : core::enzymes , protocols::antibody::clusters
• na_ade : core::chemical
• na_cyt : core::chemical
• NA_GREEK_DISTANCE : core::chemical
• na_gua : core::chemical
• na_lra : core::chemical
• na_lrc : core::chemical
• na_lrg : core::chemical
• na_lur : core::chemical
• na_rad : core::chemical
• na_rcy : core::chemical
• na_rgu : core::chemical
• na_thy : core::chemical
• na_ura : core::chemical
• naccess : core::scoring::sasa
• NAIVE : core::conformation
• NAND : protocols::filters , protocols::task_operations
• natbias_hh : core::scoring
• natbias_hs : core::scoring
• natbias_ss : core::scoring
• natbias_stwist : core::scoring
• Nb : core::chemical::element
• nCPCrossoverBehaviors : core::scoring::etable::count_pair
• nCPResidueConnectionTypes : core::scoring::etable::count_pair
• Nd : core::chemical::element
• Ne : core::chemical::element
• ne : protocols::simple_filters
• NE2_CONNECT : core::chemical
• NEGATIVE_CHARGE : core::chemical
• neigh_count : core::scoring
• neigh_vect : core::scoring
• neigh_vect_raw : core::scoring
• NEITHER : core::chemical::rings
• netcharge : core::scoring
• Neutral : protocols::antibody
• NEUTRON_DIFFRACTION : core::io::rcsb
• Ni : core::chemical::element
• NIT : protocols::match
• nmer_pssm : core::scoring
• nmer_ref : core::scoring
• nmer_svm : core::scoring
• NMR : core::io::rcsb
• nmr_pcs : core::scoring
• nmr_pre : core::scoring
• nmr_rdc : core::scoring
• No : core::chemical::element
• NO_ATOM_PROPERTY : core::chemical
• NO_ATTACHMENT : protocols::stepwise::monte_carlo::mover
• NO_CHI : core::chemical::rna
• no_crosslinker : protocols::cyclic_peptide
• NO_DERIVATIVES_FOR_ATOM : core::scoring::disulfides
• no_effect : protocols::generalized_kinematic_closure::perturber
• NO_EXTRA_CHI_SAMPLES : core::pack::task
• no_filter : protocols::generalized_kinematic_closure::filter
• NO_METAPATCHES : core::pack::palette
• no_min : protocols::antibody::design
• NO_MOVE : protocols::stepwise::monte_carlo::mover
• NO_OVERLAP : core::scoring::motif
• NO_PROPERTY : core::chemical
• NO_PUCKER : core::chemical::rna
• NO_REACTIVITY : core::pose::rna
• NO_ROTAMER_TYPE : protocols::toolbox
• no_samples : protocols::match::upstream
• no_selector : protocols::generalized_kinematic_closure::selector
• no_stats : protocols::moves
• NO_STRANDS : protocols::fldsgn::topology
• NO_SYMMETRIZATION_REQUEST : core::pack::task
• NO_TYPE : core::pose::full_model_info
• NO_VARIANT : core::chemical
• NoBondIsometry : core::chemical
• NonaromaticBond : core::chemical
• NONCANONICAL_AA : core::kinematics::jacobian
• NONE : core::pose::rna
• none : core::scoring
• NONE : protocols::antibody , protocols::jd2::JobInputterInputSource , protocols::stepwise::modeler::rna::phosphate , protocols::stepwise::screener
• NONOSE : core::chemical
• nonrotameric_chi_sample_wi_nrchi_bin : protocols::match::upstream
• nonrotameric_chi_sample_wi_nrchi_bin_to_lower_boundary : protocols::match::upstream
• NOR : protocols::filters , protocols::task_operations
• NORM_TYPE_CH : core::scoring::nmr
• NORM_TYPE_NH : core::scoring::nmr
• NORM_TYPE_NONE : core::scoring::nmr
• normal : core::conformation::membrane
• NORMALIZED_SUM : protocols::calc_taskop_filters
• NORTH : core::chemical::rna
• North : protocols::antibody
• NOSETTING : protocols::cryst
• NOT : protocols::filters , protocols::task_operations
• NotConjugableBond : core::chemical
• Np : core::chemical::element
• npd_hbond : core::scoring
• npd_hbond_bb_sc : core::scoring
• npd_hbond_intra : core::scoring
• npd_hbond_lr_bb : core::scoring
• npd_hbond_lr_bb_sc : core::scoring
• npd_hbond_sc : core::scoring
• NPD_HBOND_SET : core::scoring::EnergiesCacheableDataType
• npd_hbond_sr_bb : core::scoring
• npd_hbond_sr_bb_sc : core::scoring
• NTERM_CONNECT : core::chemical
• NU : core::id
• NU0 : core::scoring::dna
• NU1 : core::chemical::rna , core::scoring::dna
• NU2 : core::chemical::rna , core::scoring::dna
• NU3 : core::scoring::dna
• NU4 : core::scoring::dna
• NU_ATOM : core::chemical
• NUCLEOTIDE_DIPHOSPHATE : core::chemical
• num_aa_types : core::chemical
• num_cacheable_data_types : core::conformation::RotamerSetCacheableDataType , core::pose::datacache , core::scoring::EnergiesCacheableDataType
• num_canonical_aas : core::chemical
• num_cdr_loops : protocols::antibody
• num_contact_types : protocols::frag_picker
• num_context_graph_types : core::scoring
• num_cstType : protocols::jumping
• NUM_CYCLIZATION_METHODS : protocols::peptide_deriver
• num_dofType : protocols::jumping
• num_orbital_types : core::chemical::orbitals
• NUM_RM_TYPES : core::scoring::motif
• NUM_RPM_TYPES : core::scoring::motif
• num_types : core::kinematics::jacobian
• number_of_configuration_keywords : protocols::loops
• number_of_loop_refine_inner_cycle_names : protocols::loops::loop_mover::refine
• number_of_ramachandran_hashes : protocols::features
• number_of_residue_identifiers : protocols::loops
• NUMMD : core::io::pdb