- t -

T_LOOP : core::scoring::rna
Ta : core::chemical::element
TAG_DEFINITION : protocols::stepwise::screener
TANDEM_GA_SHEARED : core::scoring::rna
TANDEM_GA_WATSON_CRICK : core::scoring::rna
target_clash : core::scoring
TAU_ATOM : core::chemical
TAUTOMER : core::chemical
Tb : core::chemical::element
TB3_COORDINATION : core::chemical
TBMB : protocols::cyclic_peptide
Tc : core::chemical::element
Te : core::chemical::element
ten_A_neighbor_graph : core::scoring
TER : core::io::pdb
TERMINUS : core::chemical
TERPENE : core::chemical
TETRAGONAL : protocols::cryst
tetrahedral_metal : protocols::cyclic_peptide
TETRALOOP_TL_RECEPTOR : core::scoring::rna
TETROSE : core::chemical
tf_constant : core::scoring::aa_composition_energy , core::scoring::netcharge_energy
tf_end_of_list : core::scoring::aa_composition_energy , core::scoring::netcharge_energy
tf_linear : core::scoring::aa_composition_energy , core::scoring::netcharge_energy
tf_quadratic : core::scoring::aa_composition_energy , core::scoring::netcharge_energy
tf_unknown : core::scoring::aa_composition_energy , core::scoring::netcharge_energy
Th : core::chemical::element
THEORETICAL_MODEL : core::io::rcsb
THERMAL_SAMPLER : protocols::stepwise::modeler
THETA : core::chemical::rings , core::id
THETA_ATOM : core::chemical
thickness : core::conformation::membrane
Thio : protocols::fldsgn::topology
THIO_SUGAR : core::chemical
Thioredoxin : protocols::fldsgn::topology
three_fold : core::scoring
THREE_PRIME : core::pose::rna
THREE_PRIME_AZIDE : core::chemical
THREE_PRIME_DEOXY : core::chemical
THREE_PRIME_END_OH : core::chemical
THREE_PRIME_FIVE_PRIME_METHYL_PHOSPHATE : core::chemical
THREE_PRIME_PACKABLE_PHOSPHATE : core::chemical
THREE_PRIME_PHOSPHATE : core::chemical , protocols::stepwise::modeler::rna::phosphate
THREE_PRIME_TWO_PRIME_CYCLIC_PHOSPHATE : core::chemical
THREEDGRID : core::conformation
Ti : core::chemical::element
TITLE : core::io::pdb
Tl : core::chemical::element
TL_RECEPTOR : core::scoring::rna
Tm : core::chemical::element
TM3_COORDINATION : core::chemical
TMA : protocols::cyclic_peptide
TNA : core::chemical
tna_suite : core::scoring
tna_suite_lr : core::scoring::methods
Top7 : protocols::fldsgn::topology
total : protocols::analysis
TOTAL_NUM_CRITERIA : core::conformation::symmetry
total_number_elements : core::chemical::element
total_score : core::scoring
TP3 : core::chemical
TRADITIONAL_MINIMIZER : protocols::stepwise::modeler
TRANS : core::chemical::rna
TRIAZOLAMERC : core::chemical
TRIAZOLAMERN : core::chemical
TRIAZOLE_LINKER : core::chemical
TRICLINIC : protocols::cryst
trigonal_planar_metal : protocols::cyclic_peptide
trigonal_pyramidal_metal : protocols::cyclic_peptide
TRIMETHYLATION : core::chemical
TRIOSE : core::chemical
TripleBond : core::chemical
TripleBondOrder : core::chemical
twelve_A_neighbor_graph : core::scoring
TWOPRIME_RES : core::pose::full_model_info
TYPE_SET_MODES_LENGTH : core::chemical