Here is a list of all namespace members with links to the namespace documentation for each member:

- e -

• E : protocols::comparative_modeling::features , protocols::features
• e_pH : core::scoring
• E_SS : protocols::comparative_modeling::features
• EBC_bb_cartesian : protocols::energy_based_clustering
• EBC_bb_dihedral : protocols::energy_based_clustering
• EBC_ClusterType : protocols::energy_based_clustering
• EBC_end_of_list : protocols::energy_based_clustering
• ec_funcs : protocols::pack_daemon
• ED : core::chemical , protocols::simple_moves
• EDGE_NGHBRS : protocols::viewer
• edge_satisfies_heavy_unsat_for_node() : protocols::hbnet
• EdgeAP : core::kinematics
• EdgeMap : protocols::sewing::hashing
• EdgeMapGeneratorCOP : protocols::sewing::hashing
• EdgeMapGeneratorOP : protocols::sewing::hashing
• EdgeMapOP : protocols::sewing::hashing
• EdgeOP : core::kinematics
• edges_within_interval() : protocols::forge::methods
• effective_lower_terminus_based_on_working_res() : core::pose
• effective_upper_terminus_based_on_working_res() : core::pose
• EFr : protocols::fldsgn::topology
• EIsometry : core::chemical
• EIter : core::chemical
• EIterPair : core::chemical
• elec_dens_allatom_cen_energy : core::scoring::methods
• elec_dens_atomwise : core::scoring
• elec_dens_atomwise_energy : core::scoring::methods
• elec_dens_cen_energy : core::scoring::methods
• elec_dens_energy : core::scoring::methods
• elec_dens_fast : core::scoring
• elec_dens_fast_energy : core::scoring::methods
• elec_dens_whole_structure_allatom : core::scoring
• elec_dens_whole_structure_ca : core::scoring
• elec_dens_window : core::scoring
• elec_method : core::scoring::methods
• ELEC_NBLIST : core::scoring::EnergiesCacheableDataType
• elec_pair_nblist : core::scoring
• ELEC_TRIE_COLLECTION : core::scoring::EnergiesCacheableDataType
• ElecDensAllAtomCenEnergyCreator_registrator : core::init
• ElecDensAtomwiseEnergyCOP : core::energy_methods
• ElecDensAtomwiseEnergyCreator_registrator : core::init
• ElecDensAtomwiseEnergyOP : core::energy_methods
• ElecDensCenEnergyCreator_registrator : core::init
• ElecDensEnergyCreator_registrator : core::init
• ElecRotamerTrieCOP : core::scoring::elec::electrie
• ElecRotamerTrieOP : core::scoring::elec::electrie
• ELECTRON_CRYSTALLOGRAPHY : core::io::rcsb
• ELECTRON_DEFRACTION : core::io::rcsb
• ELECTRON_MICROSCOPY : core::io::rcsb
• ElectronDensityCOP : core::scoring::electron_density
• ElectronDensityOP : core::scoring::electron_density
• ELECTROPHILE : core::chemical
• ElectrostaticComplementarityCalculatorCOP : core::scoring::sc
• ElectrostaticComplementarityCalculatorOP : core::scoring::sc
• ElectrostaticComplementarityMetricCOP : core::simple_metrics::composite_metrics
• ElectrostaticComplementarityMetricOP : core::simple_metrics::composite_metrics
• ElectrostaticSimilarityCalculatorCOP : core::scoring::sc
• ElectrostaticSimilarityCalculatorOP : core::scoring::sc
• ElectrostaticSimilarityMetricCOP : core::simple_metrics::composite_metrics
• ElectrostaticSimilarityMetricOP : core::simple_metrics::composite_metrics
• element2name() : core::chemical::element
• element_string() : core::scoring
• element_string_dc() : core::scoring
• ElementCOP : core::chemical
• ElementOP : core::chemical
• Elements : core::chemical::element
• elements_from_name() : core::chemical::element
• ElementSetAP : core::chemical
• ElementSetCAP : core::chemical
• ElementSetCOP : core::chemical
• ElementSetOP : core::chemical
• ellinte() : core::scoring::rna::chemical_shift
• ellintk() : core::scoring::rna::chemical_shift
• EllipsoidalRandomizationMoverCOP : protocols::docking
• EllipsoidalRandomizationMoverOP : protocols::docking
• EmbeddingCOP : protocols::membrane::geometry
• EmbeddingDefCOP : protocols::membrane::geometry
• EmbeddingDefOP : protocols::membrane::geometry
• EmbeddingOP : protocols::membrane::geometry
• emit_intermediate() : protocols::nonlocal , protocols::star
• empty_size_list : protocols::frags
• EMPTY_STRING() : protocols::anchored_design
• empty_string() : protocols::viewer
• EmptyPoseJobInputterOP : protocols::jd2
• enable_constraint_scoreterms() : protocols::enzdes::enzutil
• enable_sampling_of_loop_takeoff() : protocols::stepwise::modeler::protein::loop_close
• EnableMultiCoolAnnealerCOP : core::pack::task::operation
• EnableMultiCoolAnnealerCreator_registrator : core::init
• EnableMultiCoolAnnealerOP : core::pack::task::operation
• EnableSmartAnnealerCOP : core::pack::task::operation
• EnableSmartAnnealerCreator_registrator : core::init
• EnableSmartAnnealerOP : core::pack::task::operation
• enclosing_angles() : core::membrane
• encode_alphanum() : protocols::wum
• END : core::io::pdb
• end : core::sequence
• END : protocols::abinitio::abscript
• END_ABINITIO : protocols::abinitio
• end_bias_probabilities() : protocols::medal
• END_BLOCK() : protocols::jd2
• END_OF_BEHAVIOUR_LIST : core::pack::palette
• end_of_crosslinker_list : protocols::cyclic_peptide
• end_of_effect_list : protocols::generalized_kinematic_closure::perturber
• end_of_filetype_list : core::import_pose
• end_of_filter_list : protocols::generalized_kinematic_closure::filter
• END_OF_LIST : core::scoring::sasa
• END_OF_MINIMIZATION : protocols::optimize_weights
• end_of_ramatable_type_list : core::scoring
• end_of_score_type_enumeration : core::scoring
• end_of_selector_list : protocols::generalized_kinematic_closure::selector
• end_sig : core::energy_methods
• end_sig2 : core::energy_methods
• ENDMDL : core::io::pdb
• EndToEndPivotsCOP : protocols::kinematic_closure::pivot_pickers
• EndToEndPivotsOP : protocols::kinematic_closure::pivot_pickers
• EnergiesByTaskCalculatorCOP : protocols::mean_field
• EnergiesByTaskCalculatorOP : protocols::mean_field
• EnergiesCOP : core::scoring
• EnergiesOP : core::scoring
• Energy : core
• energy : protocols::buns
• energy_evaluator : protocols::simple_filters
• energy_from_pose() : core::pose
• energy_per_residue_filter_tracer() : protocols::simple_filters
• EnergyBasedClusteringOptionsCOP : protocols::energy_based_clustering
• EnergyBasedClusteringOptionsOP : protocols::energy_based_clustering
• EnergyBasedClusteringProtocolCOP : protocols::energy_based_clustering
• EnergyBasedClusteringProtocolOP : protocols::energy_based_clustering
• EnergyBasePair : core::pose::rna
• EnergyBasePairList : core::pose::rna
• EnergyBaseStack : core::pose::rna
• EnergyBaseStackList : core::pose::rna
• EnergyCutRotamerTrialsMinMoverCOP : protocols::minimization_packing
• EnergyCutRotamerTrialsMinMoverOP : protocols::minimization_packing
• EnergyCutRotamerTrialsMoverCOP : protocols::minimization_packing
• EnergyCutRotamerTrialsMoverOP : protocols::minimization_packing
• EnergyDerivative : core
• EnergyEvalAP : core::fragment::picking_old::vall::eval
• EnergyEvalCAP : core::fragment::picking_old::vall::eval
• EnergyEvalCOP : core::fragment::picking_old::vall::eval
• EnergyEvalOP : core::fragment::picking_old::vall::eval
• EnergyGradient : core
• EnergyGraphOP : core::scoring
• EnergyJobSummaryCOP : protocols::jd3::job_summaries
• EnergyJobSummaryOP : protocols::jd3::job_summaries
• EnergyLandscapeEvaluatorCOP : protocols::toolbox
• EnergyLandscapeEvaluatorOP : protocols::toolbox
• EnergyMap : core::scoring
• EnergyMapContainerCOP : protocols::relax
• EnergyMapContainerOP : protocols::relax
• EnergyMethodCOP : core::scoring::methods
• EnergyMethodCreatorCOP : core::scoring::methods
• EnergyMethodCreatorOP : core::scoring::methods
• EnergyMethodOP : core::scoring::methods
• EnergyMethodOptionsCOP : core::scoring::methods
• EnergyMethodOptionsOP : core::scoring::methods
• EnergyMethods : core::scoring::methods
• EnergyMethodType : core::scoring::methods
• energynames : core::io::silent
• EnergyNamesOP : core::io::silent
• enforce_all_waters() : protocols::hydrate
• Enhanced_Chothia_Scheme : protocols::antibody
• enlarge_h_lj_wdepth() : core::chemical
• EnsembleConstraints_SimpleCOP : protocols::cluster
• EnsembleConstraints_SimpleOP : protocols::cluster
• EnsembleConstraintsCOP : protocols::cluster
• EnsembleConstraintsOP : protocols::cluster
• EnsembleJobInputterCOP : protocols::jd2
• EnsembleJobInputterOP : protocols::jd2
• ensure_appropriate_foldtree_for_move() : protocols::stepwise::monte_carlo::mover
• ensure_directory_for_out_silent_file_exists() : protocols::stepwise::legacy::modeler::rna
• ensure_phosphate_nomenclature_matches_mini() : protocols::rna::denovo
• ensure_valid_full_seq_num() : protocols::stepwise::modeler::rna
• ENTER : core::scoring::packstat
• entity_elements_from_1letterstring() : protocols::multistate_design
• EntityCOP : protocols::genetic_algorithm
• EntityCorrespondenceCOP : protocols::pack_daemon
• EntityCorrespondenceOP : protocols::pack_daemon
• EntityElementCOP : protocols::genetic_algorithm
• EntityElementCreatorCOP : protocols::genetic_algorithm
• EntityElementCreatorOP : protocols::genetic_algorithm
• EntityElementOP : protocols::genetic_algorithm
• EntityElements : protocols::genetic_algorithm
• EntityFuncCOP : protocols::pack_daemon
• EntityFuncOP : protocols::pack_daemon
• EntityOP : protocols::genetic_algorithm
• EntityRandomizerCOP : protocols::genetic_algorithm
• EntityRandomizerOP : protocols::genetic_algorithm
• Enum : core::conformation::RotamerSetCacheableDataType , core::scoring::EnergiesCacheableDataType , protocols::forge::build::BuildInstructionState , protocols::forge::build::SegmentInsertConnectionScheme , protocols::forge::components::VLB_VallMemoryUsage , protocols::jd2::JobInputterInputSource
• env : core::scoring
• EnvClaimAP : protocols::environment::claims
• EnvClaimBrokerAP : protocols::environment
• EnvClaimBrokerCAP : protocols::environment
• EnvClaimBrokerCOP : protocols::environment
• EnvClaimBrokerOP : protocols::environment
• EnvClaimCAP : protocols::environment::claims
• EnvClaimCOP : protocols::environment::claims
• EnvClaimOP : protocols::environment::claims
• EnvClaims : protocols::environment::claims
• EnvCoreAP : core::environment
• EnvCoreCAP : core::environment
• EnvCoreCOP : core::environment
• EnvCoreOP : core::environment
• EnvEnergyCreator_registrator : core::init
• EnvironmentAP : protocols::environment
• EnvironmentCAP : protocols::environment
• EnvironmentCOP : protocols::environment
• EnvironmentOP : protocols::environment
• EnvLabelSelectorCOP : protocols::environment::claims
• EnvLabelSelectorOP : protocols::environment::claims
• EnvMoverCOP : protocols::environment
• EnvMoverOP : protocols::environment
• EnvPairPotentialCOP : core::scoring
• EnvPairPotentialOP : core::scoring
• envsmooth : core::scoring
• EnvSmoothEnergyCreator_registrator : core::init
• EnzConstraintIOAP : protocols::toolbox::match_enzdes_util
• EnzConstraintIOCAP : protocols::toolbox::match_enzdes_util
• EnzConstraintIOCOP : protocols::toolbox::match_enzdes_util
• EnzConstraintIOOP : protocols::toolbox::match_enzdes_util
• EnzConstraintParametersAP : protocols::toolbox::match_enzdes_util
• EnzConstraintParametersCAP : protocols::toolbox::match_enzdes_util
• EnzConstraintParametersCOP : protocols::toolbox::match_enzdes_util
• EnzConstraintParametersOP : protocols::toolbox::match_enzdes_util
• EnzCstTemplateResAtomsCOP : protocols::toolbox::match_enzdes_util
• EnzCstTemplateResAtomsOP : protocols::toolbox::match_enzdes_util
• EnzCstTemplateResCacheCOP : protocols::toolbox::match_enzdes_util
• EnzCstTemplateResCacheOP : protocols::toolbox::match_enzdes_util
• EnzCstTemplateResCOP : protocols::toolbox::match_enzdes_util
• EnzCstTemplateResOP : protocols::toolbox::match_enzdes_util
• ENZDES_OBSERVER : core::pose::datacache
• EnzdesBaseProtocolAP : protocols::enzdes
• EnzdesBaseProtocolCAP : protocols::enzdes
• EnzdesBaseProtocolCOP : protocols::enzdes
• EnzdesBaseProtocolOP : protocols::enzdes
• EnzdesCacheableObserverAP : protocols::toolbox::match_enzdes_util
• EnzdesCacheableObserverCAP : protocols::toolbox::match_enzdes_util
• EnzdesCacheableObserverCOP : protocols::toolbox::match_enzdes_util
• EnzdesCacheableObserverOP : protocols::toolbox::match_enzdes_util
• EnzdesCstCacheCOP : protocols::toolbox::match_enzdes_util
• EnzdesCstCacheOP : protocols::toolbox::match_enzdes_util
• EnzdesCstParamCacheCOP : protocols::toolbox::match_enzdes_util
• EnzdesCstParamCacheOP : protocols::toolbox::match_enzdes_util
• EnzdesFixBBProtocolOP : protocols::enzdes
• EnzdesFlexBBProtocolAP : protocols::enzdes
• EnzdesFlexBBProtocolCAP : protocols::enzdes
• EnzdesFlexBBProtocolCOP : protocols::enzdes
• EnzdesFlexBBProtocolOP : protocols::enzdes
• EnzdesFlexibleRegionCOP : protocols::enzdes
• EnzdesFlexibleRegionOP : protocols::enzdes
• EnzdesJobInputterCOP : protocols::enzdes
• EnzdesJobInputterOP : protocols::enzdes
• EnzdesJobOutputterOP : protocols::enzdes
• EnzdesLoopInfoCOP : protocols::toolbox::match_enzdes_util
• EnzdesLoopInfoOP : protocols::toolbox::match_enzdes_util
• EnzdesLoopsFileCOP : protocols::toolbox::match_enzdes_util
• EnzdesLoopsFileOP : protocols::toolbox::match_enzdes_util
• EnzdesScorefileFilterCOP : protocols::enzdes
• EnzdesScorefileFilterOP : protocols::enzdes
• EnzdesSeqRecoveryCacheCOP : protocols::toolbox::match_enzdes_util
• EnzdesSeqRecoveryCacheOP : protocols::toolbox::match_enzdes_util
• EnzRepackMinimizeOP : protocols::enzdes
• EnzymaticMoverCOP : protocols::enzymatic_movers
• EnzymaticMoverOP : protocols::enzymatic_movers
• EnzymeDataSet : core::enzymes
• EPR : core::io::rcsb
• epr_deer_input_data_ : core::scoring::epr_deer
• epr_deer_lr : core::scoring::methods
• epr_deer_score : core::scoring
• EPRSpinLabelCOP : core::scoring::epr_deer
• EPRSpinLabelOP : core::scoring::epr_deer
• EPSILON : core::chemical::rna , core::scoring::dna
• EPSILON_ATOM : core::chemical
• epsilon_torsion_post_methylene_para_aramid() : core::id
• epsilon_torsion_pre_methylene_para_aramid() : core::id
• epsilon_torsion_pre_methylene_post_methylene_meta_aramid() : core::id
• epsilon_torsion_pre_methylene_post_methylene_para_aramid() : core::id
• eq : protocols::simple_filters
• eq_OP_deref() : protocols::genetic_algorithm
• EQUATORIAL : core::chemical::rings
• Er : core::chemical::element
• erase_if_in_any_slice() : protocols::rna::movers
• ERRASER2ProtocolCOP : protocols::rna::movers
• ERRASER2ProtocolOP : protocols::rna::movers
• ErraserMinimizerMoverCOP : protocols::rna::movers
• ErraserMinimizerMoverOP : protocols::rna::movers
• ERROR : core::select::residue_selector::slice_enums
• error_check_requested_adducts() : core::chemical
• error_message : protocols::pack_daemon
• ERROR_PREFIX : protocols::medal , protocols::star
• Es : core::chemical::element
• EST_THRESHOLD_MODE : protocols::cluster::calibur
• estimate_n_2body_calcs_for_linmem_ig() : core::pack::interaction_graph
• estimate_n_2body_calcs_for_precomputation() : core::pack::interaction_graph
• ET_BEST_CYCLIC : protocols::peptide_deriver
• ET_BEST_LINEAR : protocols::peptide_deriver
• ET_GENERAL : protocols::peptide_deriver
• ETA_ATOM : core::chemical
• eta_torsion_meta_aramid() : core::id
• eta_torsion_para_aramid() : core::id
• eta_torsion_post_methylene_meta_aramid() : core::id
• eta_torsion_post_methylene_ortho_aramid() : core::id
• eta_torsion_post_methylene_para_aramid() : core::id
• eta_torsion_pre_methylene_meta_aramid() : core::id
• eta_torsion_pre_methylene_ortho_aramid() : core::id
• eta_torsion_pre_methylene_para_aramid() : core::id
• eta_torsion_pre_methylene_post_methylene_meta_aramid() : core::id
• eta_torsion_pre_methylene_post_methylene_ortho_aramid() : core::id
• eta_torsion_pre_methylene_post_methylene_para_aramid() : core::id
• etab_classic_intrares_pair_nblist : core::scoring
• etab_classic_intrares_single_nblist : core::scoring
• etab_pair_nblist : core::scoring
• etab_single_nblist : core::scoring
• ETABLE_CLASSIC_INTRARES_NBLIST : core::scoring::EnergiesCacheableDataType
• etable_method : core::scoring::methods
• ETABLE_NBLIST : core::scoring::EnergiesCacheableDataType
• ETABLE_TRIE_COLLECTION : core::scoring::EnergiesCacheableDataType
• EtableCAP : core::scoring::etable
• EtableClassicIntraEnergyCreator_registrator : core::init
• EtableCOP : core::scoring::etable
• EtableEnergyCreator_registrator : core::init
• EtableEnergyOP : core::scoring::etable
• EtableEvaluatorCAP : core::scoring::etable
• EtableEvaluatorCOP : core::scoring::etable
• EtableEvaluatorOP : core::scoring::etable
• EtableFuncOP : core::scoring::func
• EtableOP : core::scoring::etable
• EtableOptionsCOP : core::scoring::etable
• EtableOptionsOP : core::scoring::etable
• EtableRotamerTrieCOP : core::scoring::etable::etrie
• EtableRotamerTrieOP : core::scoring::etable::etrie
• Eu : core::chemical::element
• euler_angles_from_rotation_matrix() : core::scoring::nmr
• EULER_CONVENTION : core::scoring::nmr
• EulerAnglesCOP : protocols::stepwise::sampler::rigid_body
• EulerAnglesOP : protocols::stepwise::sampler::rigid_body
• eval() : core::energy_methods
• eval_atom_derivatives_for_minedge() : core::scoring
• eval_atom_derivatives_for_minnode() : core::scoring
• eval_bbbb_sr2b_energies() : core::scoring
• eval_bbsc_sr2b_energies() : core::scoring
• EVAL_DFUNC : protocols::optimize_weights
• eval_dof_deriv_for_minnode() : core::scoring
• EVAL_FUNC : protocols::optimize_weights
• eval_res_onebody_energies_for_minnode() : core::scoring
• eval_res_pair_energy_for_minedge() : core::scoring
• eval_scsc_sr2b_energies() : core::scoring
• eval_weighted_atom_derivatives_for_minedge() : core::scoring
• eval_weighted_dof_deriv_for_minnode() : core::scoring
• eval_weighted_res_onebody_energies_for_minnode() : core::scoring
• eval_weighted_res_pair_energy_for_minedge() : core::scoring
• evaluate_entity : protocols::pack_daemon
• evaluate_lk_ball_energy_for_atom_ranges() : core::scoring::lkball
• evaluate_pose() : protocols::evaluation
• EvaluatedTrialMoverOP : protocols::simple_filters
• evaluaterdc() : core::scoring
• EvaluatorCreatorCOP : protocols::evaluation
• EvaluatorCreatorOP : protocols::evaluation
• even_cluster_monte_carlo : protocols::antibody::design
• even_length_cluster_monte_carlo : protocols::antibody::design
• EvenlyPartitionedNodeManagerCOP : protocols::jd3::dag_node_managers
• EvenlyPartitionedNodeManagerOP : protocols::jd3::dag_node_managers
• EventIter : core::scoring::packstat
• Events : core::scoring::packstat
• EventType : core::scoring::packstat
• EvolutionaryDynamicsMoverCOP : protocols::evolution
• EvolutionaryDynamicsMoverOP : protocols::evolution
• EvolutionaryDynamicsMoverTrigger : protocols::evolution
• EX_FOUR_HALF_STEP_STDDEVS : core::pack::task
• EX_ONE_HALF_STEP_STDDEV : core::pack::task
• EX_ONE_STDDEV : core::pack::task
• EX_SIX_QUARTER_STEP_STDDEVS : core::pack::task
• EX_THREE_THIRD_STEP_STDDEVS : core::pack::task
• EX_TWO_FULL_STEP_STDDEVS : core::pack::task
• EX_TWO_HALF_STEP_STDDEVS : core::pack::task
• ExactOccludedHbondSolEnergyCOP : core::energy_methods
• ExactOccludedHbondSolEnergyCreator_registrator : core::init
• ExactOccludedHbondSolEnergyOP : core::energy_methods
• EXCLUDE_ADDUCT_VARIANT_AT_DNA_POSITIONS : core::pack::palette
• EXCLUSIVE : protocols::environment::claims
• Exclusive : protocols::features::RelevantResiduesMode
• existing_atoms() : protocols::constraint_generator
• EXIT : core::scoring::packstat
• expand_icoor_atom_name() : core::chemical
• EXPDTA : core::io::pdb
• expected_output_for_model_name() : core::pack::annealer
• experimental_technique_to_string() : core::io::rcsb
• ExperimentalTechnique : core::io::rcsb
• ExperimentalTechnique_max : core::io::rcsb
• ExperimentalTechnique_max_current : core::io::rcsb
• ExperimentalTechniques : core::io::rcsb
• ExpExpressionCOP : protocols::pack_daemon
• ExpExpressionOP : protocols::pack_daemon
• explicit_links_from_sfr_linkage() : core::io
• ExplicitWaterMoverCOP : protocols::simple_moves
• ExplicitWaterMoverOP : protocols::simple_moves
• exponential : protocols::canonical_sampling
• exponential_deriv() : core::scoring::constraints
• export_packer_results() : protocols::rna::denovo
• ExposedHydrophobicsFilterAP : protocols::denovo_design::filters
• ExposedHydrophobicsFilterCAP : protocols::denovo_design::filters
• ExposedHydrophobicsFilterCOP : protocols::denovo_design::filters
• ExposedHydrophobicsFilterOP : protocols::denovo_design::filters
• EXT_OMG : protocols::loops , protocols::star
• EXT_PHI : protocols::loops , protocols::star
• EXT_PSI : protocols::loops , protocols::star
• extend : protocols::loops
• extend_sequence_mapping() : protocols::loops
• ExtendChainMoverAP : protocols::denovo_design::movers
• ExtendChainMoverCAP : protocols::denovo_design::movers
• ExtendChainMoverCOP : protocols::denovo_design::movers
• ExtendChainMoverOP : protocols::denovo_design::movers
• Extended : protocols::antibody
• ExtendedPoseBuilderCOP : protocols::denovo_design::components
• ExtendedPoseBuilderOP : protocols::denovo_design::components
• ExtendedPoseMoverCOP : protocols::pose_creation
• ExtendedPoseMoverOP : protocols::pose_creation
• ExtendFailure : protocols::loops::loop_mover
• extension_from_filetype() : core::import_pose
• extent_aa_str() : core::fragment::picking_old::vall
• extent_ss_str() : core::fragment::picking_old::vall
• extent_to_fragdata() : core::fragment::picking_old::vall
• ExternalGeomSamplerCOP : protocols::toolbox::match_enzdes_util
• ExternalGeomSamplerOP : protocols::toolbox::match_enzdes_util
• ExternalPackerResultLoaderCOP : protocols::quantum_annealing
• ExternalPackerResultLoaderOP : protocols::quantum_annealing
• ExternalTransform : protocols::toolbox::match_enzdes_util
• EXTRA_MINIMIZE : core::pose::full_model_info
• EXTRA_MINIMIZE_JUMP : core::pose::full_model_info
• extra_suite_atoms_lower() : protocols::stepwise::modeler::align
• extra_suite_atoms_upper() : protocols::stepwise::modeler::align
• EXTRACHI_CUTOFF_LIMIT : core::pack::task
• ExtraChiCutoffCreator_registrator : core::init
• ExtraChiCutoffOP : core::pack::task::operation
• ExtraChiCutoffRLTCreator_registrator : core::init
• extract_asymmetric_unit() : core::pose::symmetry
• extract_asymmetric_unit_pdb_info() : core::pose::symmetry
• extract_continuous_chunks() : protocols::loops
• extract_int() : protocols::denovo_design
• extract_residue_entries() : protocols::indexed_structure_store
• extract_residue_entry() : protocols::indexed_structure_store
• extract_rna_chains() : core::pose::rna
• extract_sample_weights() : protocols::loophash
• extract_secondary_structure_chunks() : protocols::loops
• extract_sheets_from_pose() : protocols::denovo_design::components
• extract_sheets_from_strandlist() : protocols::denovo_design::components
• extract_tag_from_pose() : core::pose
• ExtractAsymmetricPoseMoverCOP : protocols::symmetry
• ExtractAsymmetricPoseMoverOP : protocols::symmetry
• ExtractAsymmetricUnitMoverCOP : protocols::symmetry
• ExtractAsymmetricUnitMoverOP : protocols::symmetry
• ExtractSmallest() : protocols::toolbox
• ExtractSubposeMoverCOP : protocols::matdes
• ExtractSubposeMoverOP : protocols::matdes
• ExtraDataEnum : core::io::mmtf
• ExtraDataEnum_total : core::io::mmtf
• ExtraDataEnumManagerCOP : core::io::mmtf
• ExtraDataEnumManagerOP : core::io::mmtf
• ExtraRotamersCreator_registrator : core::init
• ExtraRotamersGenericCreator_registrator : core::init
• ExtraRotamersGenericOP : core::pack::task::operation
• ExtraRotamersGenericRLTCreator_registrator : core::init
• ExtraRotamersOP : core::pack::task::operation
• ExtraRotSample : core::pack::task
• ExtraRotSampleCardinality : core::pack::task
• extras : protocols::loops
• ExtraScoreVector : protocols::frag_picker