Here is a list of all namespace members with links to the namespace documentation for each member:
- n -
- N
: core::chemical::element
, protocols::forge::build::SegmentInsertConnectionScheme
, protocols::sic_dock::scores
- n2c
: protocols::rigid
- N5()
: protocols::sic_dock::scores
- N6()
: protocols::sic_dock::scores
- N_ACETYLATION
: core::chemical
- n_ali8_
: protocols::hybridization
- N_ATOM_PROPERTIES
: core::chemical
- n_cacheable_types
: core::conformation::residue_datacache
- n_chain_directions
: protocols::loops::loop_closure::ccd
- n_ci_2b_score_types
: core::scoring
- n_correctly_aligned_positions()
: core::sequence
- n_daemon_set_messages
: protocols::pack_daemon
- n_DOF_Type()
: core::id
- n_energy_method_types
: core::scoring::methods
- n_energy_methods
: core::scoring::methods
- n_external_transforms
: protocols::toolbox::match_enzdes_util
- n_fold_types
: protocols::fldsgn::topology
- N_FORMYLATION
: core::chemical
- n_hb_atoms
: core::scoring::hbonds
- n_inner_iterations()
: core::pack
- N_LINK_TYPES
: core::scoring::carbohydrates
- n_linked_basic_enhanced
: protocols::carbohydrates
- n_linked_best_enhanced
: protocols::carbohydrates
- n_linked_typical
: protocols::carbohydrates
- n_long_range_types
: core::scoring::methods
- N_METHYLATED
: core::chemical
- N_METHYLATION
: core::chemical
- n_min_pair_data
: core::scoring
- n_min_single_data
: core::scoring
- N_OMEGA_PREFERENCE_TYPES
: core::scoring::carbohydrates
- n_optE_data_types
: protocols::optimize_weights
- N_p_sp2
: core::chemical::orbitals
- N_pi_sp2
: core::chemical::orbitals
- n_ppo_torsion_bins
: core::conformation
- n_probe_radii
: protocols::match
- N_PROBES
: core::scoring::packstat
- N_PROPERTIES
: core::chemical
- N_RECORD_TYPES
: core::io::pdb
- n_res_eq
: core::simple_metrics::metrics
- n_res_gt
: core::simple_metrics::metrics
- n_res_gt_or_eq
: core::simple_metrics::metrics
- n_res_lt
: core::simple_metrics::metrics
- n_res_lt_or_eq
: core::simple_metrics::metrics
- n_res_ne
: core::simple_metrics::metrics
- n_score_types
: core::scoring
- n_secondary_structure_types
: protocols::loops::loop_closure::ccd
- n_shortranged_2b_score_types
: core::scoring
- n_ss_types
: protocols::comparative_modeling::features
- n_torsion_bins
: protocols::comparative_modeling::features
- N_VARIANTS
: core::chemical
- Na
: core::chemical::element
- NA
: core::enzymes
, protocols::antibody::clusters
- na_ade
: core::chemical
- NA_ChemicalShiftEnergyCreator_registrator
: core::init
- na_cyt
: core::chemical
- NA_GREEK_DISTANCE
: core::chemical
- na_gua
: core::chemical
- na_lra
: core::chemical
- na_lrc
: core::chemical
- na_lrg
: core::chemical
- na_lur
: core::chemical
- na_rad
: core::chemical
- na_rcy
: core::chemical
- na_rgu
: core::chemical
- na_thy
: core::chemical
- na_ura
: core::chemical
- naccess
: core::scoring::sasa
- NAIVE
: core::conformation
- name2aa()
: core::chemical
- name2element()
: core::chemical::element
- name2type()
: protocols::frag_picker
- name3_from_oneletter()
: protocols::motifs
- name_from_aa()
: core::chemical
- name_from_elements()
: core::chemical::element
- name_from_move()
: protocols::stepwise::monte_carlo::mover
- name_from_score_type()
: core::scoring
- NameBimap
: core::io::pose_from_sfr
- named_atom_id_to_atom_id()
: core::conformation
, core::pose
- named_stub_id_to_stub_id()
: core::conformation
, core::pose
- NamedAngleConstraintCOP
: core::scoring::constraints
- NamedAngleConstraintCreator_registrator
: core::init
- NamedAngleConstraintOP
: core::scoring::constraints
- NamedAtomID_Mask
: core::id
- NamedAtomPairConstraintCOP
: core::scoring::constraints
- NamedAtomPairConstraintOP
: core::scoring::constraints
- NamedAtoms
: core::scoring::constraints
- NamedDihedralConstraintCOP
: core::scoring::constraints
- NamedDihedralConstraintOP
: core::scoring::constraints
- NamedNodeSet
: protocols::denovo_design::components
- NamedSegmentSelectorCOP
: protocols::denovo_design::residue_selectors
- NamedSegmentSelectorOP
: protocols::denovo_design::residue_selectors
- NameIndexMapping
: core::chemical
- NamePosMap
: core::pack::rotamers
- NAMESPACE_CLOSING
: update_ResidueType_enum_files
- NAMESPACE_OPENING
: update_ResidueType_enum_files
- NameVDInserted
: core::chemical
- NameVDMap
: core::chemical
- NameVDMapping
: core::chemical
- NameVDPair
: core::chemical
- NAND
: protocols::filters
, protocols::task_operations
- natbias_hh
: core::scoring
- natbias_hs
: core::scoring
- natbias_ss
: core::scoring
- natbias_stwist
: core::scoring
- NatbiasHelicesSheetPotentialOP
: protocols::fldsgn::potentials::sspot
- NatbiasHelixPairPotentialOP
: protocols::fldsgn::potentials::sspot
- NatbiasStrandPairPotentialOP
: protocols::fldsgn::potentials::sspot
- native_CA_gdtmm()
: core::scoring
- native_CA_rmsd()
: core::scoring
- native_loop_core_CA_rmsd()
: protocols::loops
- NativeAntibodySeqCOP
: protocols::antibody::design
- NativeAntibodySeqOP
: protocols::antibody::design
- NativeRotamersMap
: protocols::legacy_sewing
- NativeSelectorCOP
: protocols::residue_selectors
- NativeSelectorOP
: protocols::residue_selectors
- natom_aligned()
: protocols::hybridization
- Nb
: core::chemical::element
- nb
: core::scoring::atomic_depth
- nbr
: protocols::sic_dock::scores
- nbr1()
: protocols::sic_dock::scores
- nbr2()
: protocols::sic_dock::scores
- nbr_atom_rmsd()
: core::scoring
- nbytes
: core::scoring::packstat::old
- NCAADefaultPackerPaletteCOP
: core::pack::palette
- NCAADefaultPackerPaletteOP
: core::pack::palette
- NCAARotamerLibrarySpecificationCOP
: core::chemical::rotamers
- NCAARotamerLibrarySpecificationCreator_registrator
: core::init
- NCAARotamerLibrarySpecificationOP
: core::chemical::rotamers
- NCaCaC_Dihedral_FuncAP
: core::scoring::disulfides
- NCaCaC_Dihedral_FuncCAP
: core::scoring::disulfides
- NCaCaC_Dihedral_FuncCOP
: core::scoring::disulfides
- NCaCaC_Dihedral_FuncOP
: core::scoring::disulfides
- ncbb_design_main_loop()
: protocols::ncbb
- NcbbDockDesignProtocolCOP
: protocols::ncbb
- NcbbDockDesignProtocolCreatorCOP
: protocols::ncbb
- NcbbDockDesignProtocolCreatorOP
: protocols::ncbb
- NcbbDockDesignProtocolOP
: protocols::ncbb
- NcontactsFilterCOP
: protocols::fldsgn::filters
- NcontactsFilterOP
: protocols::fldsgn::filters
- nCPCrossoverBehaviors
: core::scoring::etable::count_pair
- nCPResidueConnectionTypes
: core::scoring::etable::count_pair
- NCSResMappingCOP
: protocols::symmetry
- NCSResMappingOP
: protocols::symmetry
- Nd
: core::chemical::element
- ndft()
: core::scoring::fiber_diffraction
- ndft_1d()
: core::scoring::fiber_diffraction
- Ne
: core::chemical::element
- ne
: protocols::simple_filters
- NE2_CONNECT
: core::chemical
- nearest_atom_for_constraint()
: protocols::protein_interface_design::movers
- nearest_to_entry_stop_on_pose()
: protocols::splice
- NearNativeLoopCloserCOP
: protocols::pose_length_moves
- NearNativeLoopCloserOP
: protocols::pose_length_moves
- NEGATIVE_CHARGE
: core::chemical
- neigh_count
: core::scoring
- neigh_vect
: core::scoring
- neigh_vect_raw
: core::scoring
- neighbor_count()
: protocols::sic_dock
- neighbor_type_filter_tracer()
: protocols::simple_filters
- NeighborDependentTabooSamplingKinematicPerturberCOP
: protocols::loops::loop_closure::kinematic_closure
- NeighborDependentTabooSamplingKinematicPerturberOP
: protocols::loops::loop_closure::kinematic_closure
- NeighborDependentTorsionSamplingKinematicPerturberCOP
: protocols::loops::loop_closure::kinematic_closure
- NeighborDependentTorsionSamplingKinematicPerturberOP
: protocols::loops::loop_closure::kinematic_closure
- NEIGHBORHOOD_CALC()
: protocols::anchored_design
- NeighborhoodByDistanceCalculatorCOP
: protocols::pose_metric_calculators
- NeighborhoodByDistanceCalculatorOP
: protocols::pose_metric_calculators
- NeighborhoodResidueSelectorCOP
: core::select::residue_selector
- NeighborhoodResidueSelectorOP
: core::select::residue_selector
- NeighborListCOP
: core::scoring
- NeighborListDataCOP
: core::scoring::methods
- NeighborListDataOP
: core::scoring::methods
- NeighborListOP
: core::scoring
- neighbors_in_vector()
: protocols::splice
- NeighborsByDistanceCalculatorCOP
: protocols::pose_metric_calculators
- NeighborsByDistanceCalculatorOP
: protocols::pose_metric_calculators
- NeighborType_subelement_ct_name()
: protocols::simple_filters
- NEITHER
: core::chemical::rings
- NestedEnergyTermDDGMutationOptEDataOP
: protocols::optimize_weights
- NestedEnergyTermPNatAAOptEPositionDataOP
: protocols::optimize_weights
- netcharge
: core::scoring
- NetChargeConstraintCOP
: core::scoring::netcharge_energy
- NetChargeConstraintOP
: core::scoring::netcharge_energy
- NetChargeEnergyCreator_registrator
: core::init
- NetChargeEnergyOP
: core::energy_methods
- NetChargeEnergySetupCOP
: core::scoring::netcharge_energy
- NetChargeEnergySetupOP
: core::scoring::netcharge_energy
- network_contains_aa()
: protocols::hbnet
- Neutral
: protocols::antibody
- neutralize_rdmol()
: core::chemical::rdkit
- NEUTRON_DIFFRACTION
: core::io::rcsb
- new_id()
: protocols::denovo_design::movers
- NEW_JOB_ID
: protocols::jd2
- new_jump_and_cutpoint()
: protocols::denovo_design::movers
- next_hb_res()
: core::scoring::hbonds
- NGB_FUN_PTR
: protocols::neighbor
- Ni
: core::chemical::element
- NIT
: protocols::match
- nma_tr()
: protocols::normalmode
- nmer_pssm
: core::scoring
- nmer_ref
: core::scoring
- nmer_svm
: core::scoring
- NMerPSSMEnergyCOP
: core::scoring::methods
- NMerPSSMEnergyCreator_registrator
: core::init
- NMerPSSMEnergyOP
: core::scoring::methods
- NMerRefEnergyCOP
: core::scoring::methods
- NMerRefEnergyCreator_registrator
: core::init
- NMerRefEnergyOP
: core::scoring::methods
- NMerSVMEnergyCOP
: core::scoring::methods
- NMerSVMEnergyCreator_registrator
: core::init
- NMerSVMEnergyOP
: core::scoring::methods
- NMR
: core::io::rcsb
- nmr_pcs
: core::scoring
- nmr_pre
: core::scoring
- nmr_rdc
: core::scoring
- NMR_VALUE_AVERAGING_TYPE
: core::scoring::nmr
- NMRDataFactoryCOP
: core::scoring::nmr
- NMRDataFactoryOP
: core::scoring::nmr
- NMRDummySpinlabelAtomAP
: core::scoring::nmr
- NMRDummySpinlabelAtomCAP
: core::scoring::nmr
- NMRDummySpinlabelAtomCOP
: core::scoring::nmr
- NMRDummySpinlabelAtomOP
: core::scoring::nmr
- NMRDummySpinlabelAtomTable
: core::scoring::nmr
- NMRDummySpinlabelAtomTableCOIter
: core::scoring::nmr
- NMRDummySpinlabelAtomTableIter
: core::scoring::nmr
- NMRDummySpinlabelConformerAP
: core::scoring::nmr
- NMRDummySpinlabelConformerCAP
: core::scoring::nmr
- NMRDummySpinlabelConformerCOP
: core::scoring::nmr
- NMRDummySpinlabelConformerOP
: core::scoring::nmr
- NMRDummySpinlabelEnsembleAP
: core::scoring::nmr
- NMRDummySpinlabelEnsembleCAP
: core::scoring::nmr
- NMRDummySpinlabelEnsembleCOP
: core::scoring::nmr
- NMRDummySpinlabelEnsembleOP
: core::scoring::nmr
- NMRDummySpinlabelVoxelGridAP
: core::scoring::nmr
- NMRDummySpinlabelVoxelGridCAP
: core::scoring::nmr
- NMRDummySpinlabelVoxelGridCOP
: core::scoring::nmr
- NMRDummySpinlabelVoxelGridOP
: core::scoring::nmr
- NMRGridSearchAP
: core::scoring::nmr
- NMRGridSearchCAP
: core::scoring::nmr
- NMRGridSearchCOP
: core::scoring::nmr
- NMRGridSearchOP
: core::scoring::nmr
- NMRSpinlabelAP
: core::scoring::nmr
- NMRSpinlabelCAP
: core::scoring::nmr
- NMRSpinlabelCOP
: core::scoring::nmr
- NMRSpinlabelOP
: core::scoring::nmr
- NMRTensorAP
: core::scoring::nmr
- NMRTensorCAP
: core::scoring::nmr
- NMRTensorCOP
: core::scoring::nmr
- NMRTensorOP
: core::scoring::nmr
- No
: core::chemical::element
- NO_ATOM_PROPERTY
: core::chemical
- NO_ATTACHMENT
: protocols::stepwise::monte_carlo::mover
- NO_CHI
: core::chemical::rna
- no_crosslinker
: protocols::cyclic_peptide
- NO_DERIVATIVES_FOR_ATOM
: core::scoring::disulfides
- no_effect
: protocols::generalized_kinematic_closure::perturber
- NO_EXTRA_CHI_SAMPLES
: core::pack::task
- no_filter
: protocols::generalized_kinematic_closure::filter
- NO_JUMP
: protocols::rigid
- NO_LIGAND
: protocols::motifs
- NO_METAPATCHES
: core::pack::palette
- no_min
: protocols::antibody::design
- NO_MOVE
: protocols::stepwise::monte_carlo::mover
- NO_OVERLAP
: core::scoring::motif
- NO_POSITION
: core::environment
- NO_PROPERTY
: core::chemical
- NO_PUCKER
: core::chemical::rna
- NO_REACTIVITY
: core::pose::rna
- NO_ROTAMER_TYPE
: protocols::toolbox
- no_samples
: protocols::match::upstream
- no_selector
: protocols::generalized_kinematic_closure::selector
- no_stats
: protocols::moves
- NO_STRANDS
: protocols::fldsgn::topology
- NO_SYMMETRIZATION_REQUEST
: core::pack::task
- NO_TYPE
: core::pose::full_model_info
- NO_VARIANT
: core::chemical
- NoBondIsometry
: core::chemical
- NodeAP
: core::kinematics
- NodeCOP
: protocols::toolbox
- NodeIDSize
: core::scoring::hbonds::graph
- NodeManagerCOP
: protocols::jd3::dag_node_managers
- NodeManagerOP
: protocols::jd3::dag_node_managers
- NodeManagerStorageMatrixCOP
: protocols::jd3::dag_node_managers
- NodeManagerStorageMatrixOP
: protocols::jd3::dag_node_managers
- NodeOP
: core::kinematics
, protocols::toolbox
- NoDesignPackerPaletteCOP
: core::pack::palette
- NoDesignPackerPaletteOP
: core::pack::palette
- noe_stage()
: protocols::abinitio
- NoesyModuleAP
: protocols::noesy_assign
- NoesyModuleCAP
: protocols::noesy_assign
- NoesyModuleCOP
: protocols::noesy_assign
- NoesyModuleOP
: protocols::noesy_assign
- NoFailDataMapOP
: protocols::multistage_rosetta_scripts
- nolp
: core::scoring::packstat::old
- non_base_atoms
: core::chemical::rna
- non_main_chain_sugar_atoms
: core::chemical::rna
- non_peptide_heavy_atom_RMSD()
: core::scoring
- non_residue_type_constraint_tracer()
: core::scoring::constraints
- nonadduct_variants_match()
: core::chemical
- NonaromaticBond
: core::chemical
- NONCANONICAL_AA
: core::kinematics::jacobian
- noncanonical_atom_count()
: core::pose
- noncanonical_chi_count()
: core::pose
- noncanonical_residue_count()
: core::pose
- nonconst_full_model_info()
: core::pose::full_model_info
- nonconst_Membrane_FAEmbed_from_pose()
: core::scoring
- nonconst_MembraneEmbed_from_pose()
: core::scoring
- nonconst_MembraneTopology_from_pose()
: core::scoring
- nonconst_rna_scoring_info_from_pose()
: core::scoring::rna
- nonconst_vdw_cached_rep_screen_info_from_pose()
: protocols::scoring
- NonContinuousFrameCOP
: core::fragment
- NonContinuousFrameOP
: core::fragment
- NONE
: core::pose::rna
- none
: core::scoring
- NONE
: protocols::antibody
, protocols::jd2::JobInputterInputSource
, protocols::stepwise::modeler::rna::phosphate
, protocols::stepwise::screener
- NonlocalFrags_main()
: protocols::frag_picker::nonlocal
- NonlocalFragsCOP
: protocols::frag_picker::nonlocal
- NonlocalFragsOP
: protocols::frag_picker::nonlocal
- NonlocalPairCOP
: protocols::frag_picker::nonlocal
- NonlocalPairOP
: protocols::frag_picker::nonlocal
- nonmatching_residues()
: core::io::external
- NONOSE
: core::chemical
- NonPlaidFingerprintCOP
: protocols::pockets
- NonPlaidFingerprintOP
: protocols::pockets
- NonResidueTypeConstraintCOP
: core::scoring::constraints
- NonResidueTypeConstraintOP
: core::scoring::constraints
- nonrotameric_chi_sample_wi_nrchi_bin
: protocols::match::upstream
- nonrotameric_chi_sample_wi_nrchi_bin_to_lower_boundary
: protocols::match::upstream
- NonTerminalStartingSegmentRequirementCOP
: protocols::sewing::requirements
- NonTerminalStartingSegmentRequirementCreatorCOP
: protocols::sewing::requirements
- NonTerminalStartingSegmentRequirementCreatorOP
: protocols::sewing::requirements
- NonTerminalStartingSegmentRequirementOP
: protocols::sewing::requirements
- nonzero_hbond_weight()
: core::scoring::hbonds
- NOPARENT
: core::conformation::symmetry
- NOR
: protocols::filters
, protocols::task_operations
- NoRepackDisulfidesAP
: core::pack::task::operation
- NoRepackDisulfidesCAP
: core::pack::task::operation
- NoRepackDisulfidesCOP
: core::pack::task::operation
- NoRepackDisulfidesCreator_registrator
: core::init
- NoRepackDisulfidesOP
: core::pack::task::operation
- NoResFilterCreator_registrator
: core::init
- nori
: core::scoring::packstat::old
- NORM_TYPE_CH
: core::scoring::nmr
- NORM_TYPE_NH
: core::scoring::nmr
- NORM_TYPE_NONE
: core::scoring::nmr
- normal
: core::conformation::membrane
- Normal
: protocols::nonlocal
- NORMALIZED_SUM
: protocols::calc_taskop_filters
- normalizing_area()
: core::scoring
- normalizing_area_total()
: core::scoring
- normalizing_area_total_hydrophobic_atoms_only()
: core::scoring
- normalizing_area_total_polar_atoms_only()
: core::scoring
- NormalModeMinimizerCOP
: protocols::normalmode
- NormalModeMinimizerOP
: protocols::normalmode
- NormalModeRelaxMoverCOP
: protocols::normalmode
- NormalModeRelaxMoverOP
: protocols::normalmode
- NORTH
: core::chemical::rna
- North
: protocols::antibody
- NOSETTING
: protocols::cryst
- NOT
: protocols::filters
, protocols::task_operations
- not_already_connected()
: protocols::dna
- NOT_SET
: protocols::environment
- not_universal_main()
: protocols::jobdist
- NotConjugableBond
: core::chemical
- NotJumpSelectorCOP
: core::select::jump_selector
- NotJumpSelectorOP
: core::select::jump_selector
- NotResidueSelectorCOP
: core::select::residue_selector
- NotResidueSelectorOP
: core::select::residue_selector
- Np
: core::chemical::element
- npd_hb_eval_type_weight()
: core::scoring::hbonds
- npd_hbond
: core::scoring
- npd_hbond_bb_sc
: core::scoring
- npd_hbond_intra
: core::scoring
- npd_hbond_lr_bb
: core::scoring
- npd_hbond_lr_bb_sc
: core::scoring
- npd_hbond_sc
: core::scoring
- NPD_HBOND_SET
: core::scoring::EnergiesCacheableDataType
- npd_hbond_sr_bb
: core::scoring
- npd_hbond_sr_bb_sc
: core::scoring
- NPDHBondEnergyCreator_registrator
: core::init
- NPDHBondOP
: core::pack::interaction_graph
- NPDHBondSetCOP
: core::scoring::hbonds
- NPDHBondSetOP
: core::scoring::hbonds
- NPDHBSimpleInteractionGraphCOP
: core::pack::interaction_graph
- NPDHBSimpleInteractionGraphOP
: core::pack::interaction_graph
- NPDPropCalculatorCOP
: protocols::pack_daemon
- NPDPropCalculatorCreatorCOP
: protocols::pack_daemon
- NPDPropCalculatorCreatorOP
: protocols::pack_daemon
- NPDPropCalculatorOP
: protocols::pack_daemon
- nphi
: core::scoring::packstat::old
- NRbisafe()
: core::scoring::fiber_diffraction
- nres_protein()
: core::pose
- nstruct_for_job()
: protocols::jd3
- NStructIndex
: protocols::jd3
- NTERM_CONNECT
: core::chemical
- NTerminalAcetyltransferaseMoverCOP
: protocols::enzymatic_movers
- NTerminalAcetyltransferaseMoverOP
: protocols::enzymatic_movers
- ntheta
: core::scoring::packstat::old
- NtoCConstraintGeneratorOP
: protocols::forge::constraints
- NU
: core::id
- NU0
: core::scoring::dna
- NU1
: core::chemical::rna
, core::scoring::dna
- NU2
: core::chemical::rna
, core::scoring::dna
- NU3
: core::scoring::dna
- NU4
: core::scoring::dna
- NU_ATOM
: core::chemical
- NubCOP
: protocols::fold_from_loops::utils
- NubInitioLoopClosureMoverCOP
: protocols::fold_from_loops::movers
- NubInitioLoopClosureMoverOP
: protocols::fold_from_loops::movers
- NubInitioMoverCOP
: protocols::fold_from_loops
- NubInitioMoverOP
: protocols::fold_from_loops
- NubOP
: protocols::fold_from_loops::utils
- NUCLEOTIDE_DIPHOSPHATE
: core::chemical
- NucleotideMutationCOP
: protocols::evolution
- NucleotideMutationOP
: protocols::evolution
- NullMoverCOP
: protocols::moves
- NullMoverOP
: protocols::moves
- NullPoseFolderCOP
: protocols::denovo_design::components
- NullPoseFolderOP
: protocols::denovo_design::components
- num_aa_types
: core::chemical
- num_atoms()
: core::pose
- Num_BBdisplayState
: protocols::viewer::graphics_states_param
- num_bump_filter_fails
: protocols::kinematic_closure
- num_bytes
: core::scoring
, core::scoring::sasa
- num_cacheable_data_types
: core::conformation::RotamerSetCacheableDataType
, core::pose::datacache
, core::scoring::EnergiesCacheableDataType
- num_canonical_aas
: core::chemical
- num_cdr_loops
: protocols::antibody
- num_chi_angles()
: core::pose
- Num_ColorModes
: protocols::viewer::graphics_states_param
- num_contact_types
: protocols::frag_picker
- num_context_graph_types
: core::scoring
- num_cstType
: protocols::jumping
- NUM_CYCLIZATION_METHODS
: protocols::peptide_deriver
- num_dofType
: protocols::jumping
- NUM_EDGES()
: core::chemical::rna
- num_elements()
: protocols::mean_field
- NUM_ENTRIES
: protocols::trRosetta_protocols::movers
- num_hbond_acceptors()
: core::pose
- num_hbond_donors()
: core::pose
- num_heavy_atoms()
: core::pose
- num_lines_in_file()
: protocols::cluster::calibur
- num_orbital_types
: core::chemical::orbitals
- num_orientations
: core::scoring
, core::scoring::sasa
- num_overlaps
: core::scoring
, core::scoring::sasa
- num_phi
: core::scoring
, core::scoring::sasa
- num_rama_filter_fails
: protocols::kinematic_closure
- NUM_RM_TYPES
: core::scoring::motif
- NUM_RNA_CHI_TORSIONS()
: core::chemical::rna
- NUM_RNA_MAINCHAIN_TORSIONS()
: core::chemical::rna
- NUM_RNA_TORSIONS()
: core::chemical::rna
- NUM_RPM_TYPES
: core::scoring::motif
- Num_SCdisplayState
: protocols::viewer::graphics_states_param
- Num_ShowHState
: protocols::viewer::graphics_states_param
- num_strands()
: protocols::denovo_design::components
- num_theta
: core::scoring
, core::scoring::sasa
- Num_TrajectoryState
: protocols::viewer::graphics_states_param
- num_types
: core::kinematics::jacobian
- number_of_configuration_keywords
: protocols::loops
- number_of_elements_in_exclusive_upper_triangle()
: protocols::multistage_rosetta_scripts::cluster
- number_of_loop_refine_inner_cycle_names
: protocols::loops::loop_mover::refine
- number_of_ramachandran_hashes
: protocols::features
- number_of_residue_identifiers
: protocols::loops
- numbers
: core::io::rna
- NumDerivCheckDataCOP
: core::optimization
- NumDerivCheckDataOP
: core::optimization
- numerical_derivative_check()
: core::optimization
, core::optimization::symmetry
- NumericalDerivCheckResultCOP
: core::optimization
- NumericalDerivCheckResultOP
: core::optimization
- NUMMD
: core::io::pdb
- NumNeighborsSelectorCOP
: core::select::residue_selector
- NumNeighborsSelectorOP
: core::select::residue_selector
- NVlookupCOP
: core::scoring::nv
- NVlookupOP
: core::scoring::nv
- NVscoreCOP
: core::scoring::nv
- NVscoreCreator_registrator
: core::init
- NVscoreOP
: core::scoring::nv
- NWAlignerCOP
: core::sequence
- NWAlignerOP
: core::sequence