compute_difference Namespace Reference

Variables
list	differences = [[], []]
int	group = -1
	a = float(a)
	b = float(b)
	label
	alpha
	bins

Variable Documentation

a

compute_difference.a = float(a)

alpha

compute_difference.alpha

Referenced by alpha_to_beta(), CrystFFTDock.apply(), apply_rigid_body_settings(), numeric::CalculatorParser.CalculatorParser(), numeric.ccd_angle(), create_random_suite_torsion(), create_random_torsions(), define_states_test(), numeric::interpolation::Histogram< X, Y >.derivative_linear(), determine_delx_dely_delz_alpha_beta_gamma(), do_work(), figure_out_best_alpha_beta_gamma(), fix_sugar_bond_angles_CLOSE_BOND(), detail::dragonbox::cache_accessor< double >.get_cached_power(), get_temp(), numeric::interpolation::Histogram< X, Y >.interpolate_flat(), numeric::interpolation::Histogram< X, Y >.interpolate_linear(), main(), read_patchdock_entry(), reverse(), run(), ConstraintConfig.show_cst_grids(), solve_c_svc(), solve_epsilon_svr(), solve_nu_svc(), solve_nu_svr(), solve_one_class(), SpacegroupHit.SpacegroupHit(), spinner_test(), svm_train(), svm_train_one(), test(), numeric::crick_equations.X_BUNDLE(), Xpos(), numeric::crick_equations.Y_BUNDLE(), Ypos(), numeric::crick_equations.Z_BUNDLE(), and Zpos().

b

compute_difference.b = float(b)

Referenced by ui::network::Bowman.abort(), numeric.abs_difference(), binder::Context.add(), add_constraints(), align_carboxyl_diiron(), numeric.angle_of(), numeric.angle_radians(), numeric.angles_between_0_180(), LoopHash_Analyze.apply(), LigChiMover.apply(), DuboisChiMover.apply(), HolesTrainingDataMover.apply(), balls_rms(), binder.base_default_default_constructor_available(), binder::Context.bind(), binder.bind_member_functions_for_call_back(), binder::ClassBinder.bind_nested_classes(), binder.binding_template_bases(), numeric::kinematic_closure.bondangle(), numeric::kinematic_closure::radians.bondangle(), ui::network::Bowman.bowman(), basic::PyTracer.buf(), MatchSet.c2_linker_check_dist(), calc_prob(), basic.calc_quadratic(), numeric::alignment::QCPKernel< Real >.calc_rmsd_Theobald_method(), calc_SID_score(), check_coords_match(), Tet4HMatchAligner.checkalign(), numeric::geometry::hashing::MinimalClashHash.clash_ball(), cmpscnd(), compare(), compareLMAX(), detail.constexpr_max(), numeric.cos_of(), count_subset(), binder::Context.create_all_nested_namespaces(), create_starting_template(), numeric::kinematic_closure.cross(), ObjexxFCL.cross(), MatchSet.cross(), ObjexxFCL.cross_product(), numeric.cubic_polynomial_from_spline(), numeric::geometry::hashing::xyzStripeHash.debug_pdb(), derive(), detect_neighbors(), numeric::expression_parser::MultiplyExpression.differentiate(), numeric.dihedral_radians(), numeric::xyzTransform< T >.distance(), numeric::xyzTransform< T >.distance_squared(), numeric.do_log(), numeric.do_pow(), numeric::random.do_recursion(), numeric::kinematic_closure.dot(), numeric.dot_product(), dotvv(), TCDock.dump_pdb(), enclosing_angles(), numeric::linear_algebra.epslon(), utility::pointer.equal(), ObjexxFCL.equal_dimensions(), numeric::kinematic_closure.eucDistance(), numeric::kinematic_closure::radians.eucDistance(), basic::sampling::orientations::Quaternion.euler(), euler2rot(), ui::network::Bowman.execute(), ObjexxFCL::FArray1D< T >.FArray1D(), find_neighbors_directional(), fix_sugar_bond_angles_CLOSE_BOND(), ObjexxFCL.floops(), utility::py.foo_all(), utility::py.foo_all_sp(), formatter< bytes >.format(), numeric::UniformRotationSampler.generateIcosahedralSamples(), numeric::fourier::SO3coeffs.genWigner_ds(), MatchSet.get_contacting_stub(), get_distance(), get_distance_endpoint(), get_distance_midCA(), get_gremlin_d_and_width(), get_helixCAInContact(), get_interface_residues(), CrystDesign.get_interface_residues(), get_neighbor_residues(), CrystDesign.get_neighbor_residues(), get_phosphate_stub(), numeric::xyzTransform< T >.hash64(), numeric::fourier::SHT.idx_to_rot(), numeric::geometry::hashing::xyzStripeHash.init(), iprod(), binder.is_callback_structure_constructible(), binder.is_callback_structure_needed(), binder.is_inherited_from_enable_shared_from_this(), ObjexxFCL::Fstring.is_type(), isctfast(), jacobi(), ObjexxFCL::KeyFArray1D< T >.KeyFArray1D(), utility::options::ScalarOption_T_< K, T >.legal_string(), utility::options::VectorOption_T_< K, T >.legal_string(), numeric::fourier.local_max(), mad(), main(), apps::pilot::momeara::HBondConformation.make_conformation(), manual_copy(), numeric.max(), ObjexxFCL.max(), utility.max(), binder::ClassBinder.maybe_base_classes(), numeric.min(), ObjexxFCL.min(), utility.min(), numeric::linear_algebra.minimum_bounding_ellipse(), numeric::kinematic_closure.modrf(), utility.modulo(), detail.multiply(), myComparison(), native_divide(), nearlyEqual(), norm4(), numeric.not_equal_length(), PairComparator.operator()(), numeric::interpolation::spline::compare_interp_range.operator()(), numeric::kdtree::KDPoint_MinDist.operator()(), sort_minima_by_scores.operator()(), numeric::interpolation::spline::OrderPoint.operator()(), compare_VallIndex_lt.operator()(), compare_VallIndex_gt.operator()(), numeric::kinematic_closure.operator+(), numeric::kinematic_closure.operator-(), numeric::kinematic_closure.operator<<(), binder.operator<<(), bbbb::cccc.operator<<(), operator<<(), utility.operator==(), utility::json_spirit::Generator< Value_type, Ostream_type >.output(), output_sugar_geometry_parameters(), basic::sampling::orientations::Permute.Permute(), place_sf4(), place_zns(), numeric::linear_algebra.point_in_ellipse(), pose_cbcount(), print_graph(), prune_cb_pairs(), basic::svd::SVD_Solver.pythag(), numeric::linear_algebra.pythag(), numeric::linear_algebra.qzhes(), numeric::linear_algebra.qzit(), numeric::linear_algebra.qzval(), numeric::linear_algebra.qzvec(), CrystFFTDock.resample_maps_and_get_self(), residue_distance(), numeric.rgb_to_hsv(), numeric::linear_algebra.rgg(), numeric::model_quality.rsym_eigenval(), run(), ui::network::BowmanThread.run(), SphereSample.sanity_check(), numeric::kinematic_closure.scpn(), numeric::kinematic_closure::radians.scpn(), utility::keys.sequential(), set_cb_pairs(), basic::svd::SVD_Solver.set_vector_b(), numeric::geometry::hashing::xyzStripeHash.short_max(), numeric::geometry::hashing::xyzStripeHashWithMeta< T >.short_max(), numeric::geometry::hashing::xyzStripeHash.short_min(), numeric::geometry::hashing::xyzStripeHashWithMeta< T >.short_min(), sicfast(), numeric::linear_algebra.sign(), numeric.sin_of(), binder::Context.sort_binders(), sort_numerically_ascending(), numeric::interpolation::spline.spline_interpolate(), utility::keys::KeyLookup< K >.stripped_whitespace(), basic.subtract_degree_angles(), basic.subtract_radian_angles(), utility::keys.swap(), ObjexxFCL.swap(), std.swap(), swap(), utility.swap(), test(), numeric::kinematic_closure.test_bondangle(), numeric::kinematic_closure.test_eucDistance(), test_gradient(), numeric::kinematic_closure.test_scpn(), numeric::kinematic_closure.test_torsion(), numeric::kinematic_closure.torsion(), numeric::kinematic_closure::radians.torsion(), numeric::kinematic_closure::radians.triaxialCoefficients(), numeric::kinematic_closure.triaxialCoefficients(), ObjexxFCL::Fstring.trimmed_whitespace_range(), ObjexxFCL::Fstring.type_of(), detail::dragonbox.umul128(), numeric.update_5way_operation(), numeric.update_operation(), numeric.urs_norm4(), numeric::geometry::hashing::xyzStripeHash.ushort_max(), numeric::geometry::hashing::xyzStripeHashWithMeta< T >.ushort_max(), numeric::geometry::hashing::xyzStripeHash.ushort_min(), numeric::geometry::hashing::xyzStripeHashWithMeta< T >.ushort_min(), BinderVisitor.VisitCXXRecordDecl(), BinderVisitor.VisitEnumDecl(), BinderVisitor.VisitFunctionDecl(), utility::options::OptionCollection.wrapped(), basic::Emitter.write_raw(), and xyz_center_vector().

bins

compute_difference.bins

differences

list compute_difference.differences = [[], []]

group

int compute_difference.group = -1

Referenced by utility::tag::XMLSchemaComplexTypeGeneratorImpl.create_subelement(), detail::int_writer< OutputIt, Char, UInt >.on_num(), utility::tag::XMLSchemaComplexTypeGeneratorImpl.prepare_sequence_of_subelement_sets(), utility::tag::XMLSchemaComplexTypeGeneratorImpl.prepare_subelement_repeatable(), utility::options::OptionCollection.show_all(), utility::options::OptionCollection.show_all_hier(), utility::options::OptionCollection.show_help(), utility::options::OptionCollection.show_help_hier(), utility::options::OptionCollection.show_option_help(), utility::options::OptionCollection.show_option_help_hier(), utility::options::OptionCollection.show_table_text(), utility::options::OptionCollection.show_table_Wiki(), and utility::options::OptionCollection.show_user().

label

compute_difference.label