Here is a list of all class members with links to the classes they belong to:
- n -
- N
: basic::sampling::orientations::QuatDBMetadata
- n
: numeric::xyzTransform< typename >::Plane
, options_class.Option
- N
: test.Workshop9_my_shapes.PhiNByXDegreesMover
- n()
: utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
- N_
: basic::svd::SVD_Solver
- n_
: utility::options::VectorOption_T_< K, T >
- n_chunk()
: ObjexxFCL::ChunkVector< typename >
- n_default_value()
: utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
- n_derivs_
: numeric::interpolation::spline::PolycubicSpline
- n_dimensions()
: numeric::MathNTensor< T >
- n_dimensions_
: numeric::MathNTensor< T >
- n_elem_
: Histogram
- n_key()
: utility::keys::AutoKey< O, S, C >
, utility::keys::KeyLookup< K >
, utility::keys::lookup::n_key< K >
- n_key_()
: utility::keys::AutoKey< O, S, C >
- n_lower
: options_class.Option
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
- n_lower_
: utility::options::VectorOption_T_< K, T >
- n_moves
: app.surface_docking.movers.CentroidRelax
, app.surface_docking.movers.FullAtomRelax
- n_pack_min_runs_
: HDdesignMover
- n_part()
: utility::options::OptionCollection
- n_part_prefix_match()
: utility::options::OptionCollection
- n_seen()
: numeric::random::ReservoirSampler< T >
- n_seen_
: numeric::random::ReservoirSampler< T >
- n_tokens()
: utility::signals::TokenHub< ResultType, Signal >
- n_upper
: options_class.Option
, utility::options::VectorOption
, utility::options::VectorOption_T_< K, T >
- n_upper_
: utility::options::VectorOption_T_< K, T >
- n_vals()
: numeric::random::ReservoirSampler< T >
- n_value()
: utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
- n_wanted()
: numeric::random::ReservoirSampler< T >
- n_wanted_
: numeric::random::ReservoirSampler< T >
- n_xs_
: numeric::interpolation::spline::PolycubicSpline
, numeric::MathNTensor< T >
- name
: app.pyrosetta_toolkit.modules.Structure.CDR
, app.pyrosetta_toolkit.modules.Structure.Residue
, app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ParamsProperties
, app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.PatchProperties
, app.surface_docking.movers.FullAtomRelax
, basic::database::schema_generator::Column
, basic::resource_manager::ResourceOptions
, basic::sampling::orientations::QuatDBMetadata
, BuildBindings.ModuleBuilder
, fmt::internal::NamedArg< Char >
, loadPDB.PDBres
, numeric::expression_parser::FunctionToken
, numeric::expression_parser::VariableExpression
, numeric::expression_parser::VariableToken
, numeric::Polynomial_1d
, options_class.Option
, PerformanceBenchmark
, setup.PyRosettaDistribution
, tools.CppParser.CppClass
, tools.CppParser.CppEnum
, tools.CppParser.CppFunction
, tools.CppParser.CppType_Typedef
, tools.CppParser.CppVariable
, utility::file::FileName
, utility::file::PathName
, utility::options::Option
, utility::options::ScalarOption_T_< K, T >
, utility::options::VariantOption< O >
, utility::options::VectorOption_T_< K, T >
, utility::tag::XMLSchemaAttribute
, utility::tag::XMLSchemaComplexType
, utility::tag::XMLSchemaElement
, utility::tag::XMLSchemaRestriction
, yaml.error.Mark
, yaml.reader.Reader
, yaml.reader.ReaderError
, yaml.tokens.DirectiveToken
- name_
: basic::database::schema_generator::Column
, basic::resource_manager::ResourceOptions
, basic::sampling::orientations::QuaternionGrid
, numeric::expression_parser::FunctionToken
, numeric::expression_parser::VariableExpression
, numeric::expression_parser::VariableToken
, PerformanceBenchmark
, sidechain_cst_3.Atom
, utility::json_spirit::Pair_impl< Config >
, utility::json_spirit::Semantic_actions< Value_type, Iter_type >
, utility::tag::Tag
, utility::tag::XMLSchemaAttribute
, utility::tag::XMLSchemaComplexType
, utility::tag::XMLSchemaElement
, utility::tag::XMLSchemaRestriction
- name_listbox
: app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
- NAMED_ARG
: fmt::internal::Value
- named_decl()
: binder::Binder
, binder::ClassBinder
, binder::EnumBinder
, binder::FunctionBinder
- NamedArg()
: fmt::internal::NamedArg< Char >
- NamedConstObjectMap
: basic::datacache::ConstDataMap
- NameFunction
: utility::tag::XMLSchemaComplexTypeGenerator
, utility::tag::XMLSchemaComplexTypeGeneratorImpl
, utility::tag::XMLSchemaSimpleSubelementList
- namespace_path
: BuildPackagedBindings.ModuleBuilder
- Namespaces
: tools.CppParser.GccXML
- namespaces_to_bind
: binder::Config
- namespaces_to_skip
: binder::Config
- naming_func()
: utility::tag::XMLSchemaSimpleSubelementList
- nan_value
: yaml.constructor.SafeConstructor
- nargs()
: numeric::expression_parser::FunctionToken
- nargs_
: numeric::expression_parser::FunctionToken
- native_
: supercharge
- native_pose
: app.pyrosetta_toolkit.pyrosetta_toolkit.main_window
, pyrosetta.PyJobDistributor
, src.PyJobDistributor
- native_pose_
: CaToAllAtom
, ExposedStrandMover
- NativeFallbackConfiguration()
: basic::resource_manager::fallback_configuration::NativeFallbackConfiguration
- natom()
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- natom_
: numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- Natoms
: loadPDB.PDBres
- nballs_
: numeric::geometry::hashing::xyzStripeHash
- nbcount()
: numeric::geometry::hashing::xyzStripeHash
, numeric::geometry::hashing::xyzStripeHashWithMeta< T >
- nbcount_raw()
: numeric::geometry::hashing::xyzStripeHash
- nbins()
: numeric::interpolation::Histogram< typename, typename >
- ncaa_manager
: app.pyrosetta_toolkit.window_modules.clean_pdb.FixPDBWindow.FixPDBWindow
- ncell
: basic::sampling::orientations::QuaternionGrid
- Nchains
: loadPDB.Protein
- NCMinimize()
: NCMinimize
- ncols()
: numeric::MathTensor< T >
- ncols_
: numeric::MathTensor< T >
- Ncontacts
: calccontacts.resContact
- ndim()
: numeric::kdtree::HyperRectangle
, numeric::kdtree::KDTree
- ndims()
: numeric::fourier::kiss_fftnd_state
, utility::FixedSizeLexicographicalIterator< S >
, utility::LexicographicalIterator
- nearest()
: numeric::NearestSelector< R, T, bool >
, numeric::NearestSelector< R, T, true >
, ObjexxFCL::NearestSelector< R, T, bool >
, ObjexxFCL::NearestSelector< R, T, true >
- need_events()
: yaml.emitter.Emitter
- need_more_events()
: yaml.emitter.Emitter
- need_more_tokens()
: yaml.scanner.Scanner
- negate()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- negated()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- neighbor_count_
: PhProtocol
- nent
: basic::sampling::orientations::QuaternionGrid
- new_calculator()
: HPatchByChainNPDCalculatorCreator
, HPatchNPDCalculatorCreator
, NBuriedUnsatsCalcultorCreator
- new_data_instance()
: basic::datacache::WriteableCacheableDataFactory
- new_false()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_int()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_line()
: utility::json_spirit::Generator< Value_type, Ostream_type >
- new_name()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_null()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_real()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_str()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_true()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- new_uint64()
: utility::json_spirit::Semantic_actions< Value_type, Iter_type >
- newClusteringTreeNode()
: numeric::ClusteringTreeNode
- Newname
: app.pyrosetta_toolkit.window_modules.pymol_integration.PyMOL.AdvancedPyMOL
- next()
: app.pyrosetta_toolkit.modules.Region.Regions
, Cache::head_t
, utility::list_element< T >
- next_
: utility::list_element< T >
- next_arg()
: fmt::internal::FormatterBase
- next_arg_index_
: fmt::internal::FormatterBase
- next_buffer
: SVR_Q
- next_index()
: utility::keys::AutoKey< O, S, C >
- next_possible_simple_key()
: yaml.scanner.Scanner
- nextRes()
: app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
, app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
- nfev
: numeric::nls::lm_status_struct
- nfft()
: numeric::fourier::kiss_dct_state
, numeric::fourier::kiss_fft_state
, numeric::fourier::kiss_fftr_state
, numeric::fourier::kiss_fftsplit_state
- nfft_
: numeric::fourier::kiss_fft_state
- Nhbonds
: calccontacts.resContact
- nlayers()
: numeric::MathTensor< T >
- nlayers_
: numeric::MathTensor< T >
- Nligands
: loadPDB.ProteinChain
- nmer_
: DockFragmentsMover
- nmer_small_
: DockFragmentsMover
- nmessages_
: utility::SimulateMPIData
- no_constraints_scorefxn_for_ddG_calc_
: zinc1_homodimer_design
- node1_
: numeric::ClusterOptions
- node2_
: numeric::ClusterOptions
- node_stack_
: utility::tag::XMLErrorHandler
- NoDefault()
: utility::options::BooleanOption
- Nodes
: tools.CppParser.GccXML
- non_preserving_reshape()
: ObjexxFCL::ChunkVector< typename >
- non_preserving_resize()
: ObjexxFCL::Chunk< T >
, ObjexxFCL::ChunkVector< typename >
- NON_PRINTABLE
: yaml.reader.Reader
- non_tree_edge()
: utility::graph::null_bfs_prune_visitor
- NONE
: fmt::internal::Value
, utility::io::izstream
, utility::io::ozstream
- none
: utility::sql_database::TransactionMode
- nonstandard_ResidueTypeSet
: app.pyrosetta_toolkit.window_main.IO.GUIInput.GUIInput
- nonzero
: app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
- NonzeroLabel
: app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
- NonzeroListbox
: app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
- NonzeroScroll
: app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
- norm()
: numeric::MathVector< T >
, numeric::Quaternion< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- norm_error()
: numeric::Quaternion< typename >
- norm_squared()
: numeric::Quaternion< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- norm_squared_error()
: numeric::Quaternion< typename >
- normal()
: numeric::HomogeneousTransform< T >
- Normalize()
: basic::sampling::orientations::Quaternion
- normalize()
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
, numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
, ObjexxFCL::CArray< typename >
, ObjexxFCL::CArrayP< typename >
, ObjexxFCL::ChunkVector< typename >
, ObjexxFCL::FArray1< typename >
- normalize_any()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- normalize_if_needed()
: numeric::BodyPosition< typename >
, numeric::Quaternion< typename >
- normalize_or_zero()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- normalized()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- normalized_any()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- normalized_or_zero()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- nosmallshear
: app.surface_docking.movers.FullAtomRelax
- not_blank()
: ObjexxFCL::Cstring
, ObjexxFCL::Fstring
, utility::keys::KeyLookup< K >
- not_equal_length()
: numeric::xyzTriple< typename >
, numeric::xyzVector< typename >
- not_normalized()
: numeric::Quaternion< typename >
- not_unbounded()
: ObjexxFCL::DynamicIndexRange
, ObjexxFCL::IndexRange
- not_whitespace()
: ObjexxFCL::Fstring
- note
: yaml.error.MarkedYAMLError
- NotExpression()
: numeric::expression_parser::NotExpression
- notify()
: ObjexxFCL::Observer
- notify_destructed()
: ObjexxFCL::ObserverMulti
, ObjexxFCL::ObserverSingle
- npos
: ObjexxFCL::Cstring
, ObjexxFCL::FArray< typename >
, ObjexxFCL::IndexRange
- nr_class
: svm_model
- nr_weight
: svm_parameter
- nread_limit_for_file()
: utility::io::FileContentsMap
- nreads_for_file()
: utility::io::FileContentsMap
- nrots()
: numeric::UniformRotationSampler
- nrows()
: numeric::MathTensor< T >
- nrows_
: numeric::MathTensor< T >
- nRsteps
: numeric::fourier::SHT
- nstruct
: pyrosetta.PyJobDistributor
, src.PyJobDistributor
- nSV
: svm_model
- Nter
: app.pyrosetta_toolkit.modules.Structure.CDR
- ntot
: basic::sampling::orientations::QuaternionGrid
- Ntypes
: loadPDB.Protein
- nu
: svm_parameter
- null
: utility::json_spirit::Value_impl< Config >
- null_frag_
: FragmentAssemblyMover
- NullResourceLocator()
: basic::resource_manager::locator::NullResourceLocator
- NullResourceLocatorCreator()
: basic::resource_manager::locator::NullResourceLocatorCreator
- NullStream()
: basic::resource_manager::locator::NullStream
- num
: app.pyrosetta_toolkit.modules.Structure.Residue
- num_bins()
: numeric::MultiDimensionalHistogram
- num_bins_
: numeric::MultiDimensionalHistogram
- num_considered()
: numeric::random::WeightedReservoirSampler< T >
- num_considered_
: numeric::random::WeightedReservoirSampler< T >
- num_dimensions()
: numeric::MathNTensor< T >
, numeric::MultiDimensionalHistogram
- num_elements()
: utility::recent_history_queue
- num_elements_
: utility::recent_history_queue
- num_entries
: numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >
- num_label
: app.pyrosetta_toolkit.pyrosetta_toolkit.main_window
- num_real_solutions()
: numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
- num_samples()
: basic::sampling::orientations::QuaternionGrid
- num_satisfied_
: ExposedStrandMover
- num_states_total()
: utility::FixedSizeLexicographicalIterator< S >
, utility::LexicographicalIterator
- Number()
: basic::sampling::orientations::Permute
, basic::sampling::orientations::QuatSet
- number_
: utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
- number_valid_vertices_
: utility::graph::HideVertexVisitor< Graph >
- NumberCols_
: numeric::MathMatrix< T >
- NumberRows_
: numeric::MathMatrix< T >
- numeric::xyzMatrix
: numeric::ColPointers< T >
, numeric::ColsPointer< T >
, numeric::ColVectors< T >
, numeric::RowPointers< T >
, numeric::RowsPointer< T >
, numeric::RowVectors< T >
- numSwap()
: calccontacts.atom_contact