Here is a list of all class members with links to the classes they belong to:

- m -

• m() : utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::KeyLookup< K >
• M_ : basic::svd::SVD_Solver
• m_ : utility::keys::SmallKeyMap< K, T > , utility::keys::SmallKeyVector< K, T >
• m_arr : basic::sampling::orientations::Permute
• m_buf : utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
• m_buffer : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_crc : zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_err : zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_gzip_crc : zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
• m_gzip_data_size : zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
• m_input_buffer : zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_is_gzip : zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• m_istream : zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_mpi_stream_finalized : utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• m_ostream : zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_output_buffer : zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_v : basic::sampling::orientations::QuatSet
• m_w : basic::sampling::orientations::QuatSet
• m_zip_stream : zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT > , zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• m_zip_stream_finalized : zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• Magenta : basic::Tracer
• magnitude() : numeric::Quaternion< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• magnitude_error() : numeric::Quaternion< typename >
• magnitude_squared() : numeric::Quaternion< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• magnitude_squared_error() : numeric::Quaternion< typename >
• main : app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignProtocols , app.pyrosetta_toolkit.modules.protocols.FloppyTailProtocol.FloppyTailProtocol , app.pyrosetta_toolkit.modules.protocols.GraftingProtocols.GraftMoverWindow , app.pyrosetta_toolkit.window_main.frames.InputFrame.InputFrame , app.pyrosetta_toolkit.window_main.frames.OutputFrame.OutputFrame , app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame , app.pyrosetta_toolkit.window_modules.clean_pdb.FixPDBWindow.FixPDBWindow , app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow , app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow , app.pyrosetta_toolkit.window_modules.insert_bfactor.InsertBFactor.InsertBFactor , app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager , app.pyrosetta_toolkit.window_modules.options_system.OptionSystemManager.OptionSystemManager , app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols , app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl , app.pyrosetta_toolkit.window_modules.vicinity_options.vicinity_window.vicinityrelaxwindow
• main_chain : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• main_file : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.Properties
• main_region : app.pyrosetta_toolkit.modules.DesignBreakdown.DesignBreakdown
• main_resnum : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• main_selection : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
• main_task_factory_ : CoupledMovesProtocol
• main_type : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ParamsProperties
• make_python_instance() : yaml.constructor.Constructor
• MakeValue() : fmt::internal::MakeValue< Char >
• MakeVector() : numeric::MathVector< T >
• makeWindow() : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols , app.pyrosetta_toolkit.window_modules.pymol_integration.PyMOL.AdvancedPyMOL , app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
• manager_type() : basic::resource_manager::ResourceManagerCreator
• manipulator : utility::io::izstream , utility::io::orstream
• map() : basic::datacache::CacheableStringFloatMap , basic::datacache::CacheableStringMap , basic::datacache::WriteableCacheableMap
• Map : map_wrapper< Key, Val > , utility::keys::KeyLookup< K >
• map_ : basic::datacache::CacheableStringFloatMap , basic::datacache::CacheableStringMap , basic::datacache::WriteableCacheableMap , fmt::BasicFormatter< Char > , fmt::internal::ArgMap< Char >
• map_binder() : binder::map_binder< Key, T, Compare, Allocator >
• map_for_key() : basic::resource_manager::JobOptions
• map_shrink() : utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C >
• Mapped : utility::keys::ClassKeyMap< K, T, C > , utility::keys::KeyLookup< K > , utility::keys::KeyMapTraits< K, T > , utility::keys::SmallKeyMap< K, T >
• mapped_const_pointer : utility::keys::ClassKeyMap< K, T, C > , utility::keys::SmallKeyMap< K, T >
• mapped_const_reference : utility::keys::ClassKeyMap< K, T, C > , utility::keys::KeyMapTraits< K, T > , utility::keys::SmallKeyMap< K, T >
• mapped_pointer : utility::keys::ClassKeyMap< K, T, C > , utility::keys::SmallKeyMap< K, T >
• mapped_reference : utility::keys::ClassKeyMap< K, T, C > , utility::keys::KeyMapTraits< K, T > , utility::keys::SmallKeyMap< K, T >
• mapped_type : utility::keys::ClassKeyMap< K, T, C > , utility::keys::KeyLookup< K > , utility::keys::KeyMapTraits< K, T > , utility::keys::SmallKeyMap< K, T >
• MappedConstPointer : utility::keys::ClassKeyMap< K, T, C > , utility::keys::SmallKeyMap< K, T >
• MappedConstReference : utility::keys::ClassKeyMap< K, T, C > , utility::keys::KeyMapTraits< K, T > , utility::keys::SmallKeyMap< K, T >
• MappedPointer : utility::keys::ClassKeyMap< K, T, C > , utility::keys::SmallKeyMap< K, T >
• MappedReference : utility::keys::ClassKeyMap< K, T, C > , utility::keys::KeyMapTraits< K, T > , utility::keys::SmallKeyMap< K, T >
• mapping_context : yaml.emitter.Emitter
• MapType : fmt::internal::ArgMap< Char >
• mark : app.pyrosetta_toolkit.window_modules.interactive_terminal.interactive_terminal.TkConsoleView , yaml.scanner.SimpleKey
• mark_as_processed() : utility::SimulateMPIMessage
• mark_job_tag_as_complete() : basic::resource_manager::LazyResourceManager
• markConstOverloaded() : tools.CppParser.CppClass
• marks : yaml.parser.Parser
• master_poses_ : ExposedStrandMover
• master_rank_ : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• match1_ : zinc2_homodimer_setup
• match2_ : zinc2_homodimer_setup
• MathMatrix() : numeric::MathMatrix< T >
• MathNTensor() : numeric::MathNTensor< T >
• MathTensor() : numeric::MathTensor< T >
• MathVector() : numeric::MathVector< T >
• Matrix : numeric::EulerAngles< typename > , numeric::xyzTransform< typename >
• MatrixType : numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
• max() : numeric::random::RandomGenerator , numeric::sphericalVector< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• max_ : Histogram
• max_angle : app.surface_docking.movers.CentroidRelax , app.surface_docking.movers.FullAtomRelax
• max_occurs() : utility::tag::XMLSchemaParticle , utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
• max_occurs_ : utility::tag::XMLSchemaParticle
• MAX_PACKED_ARGS : fmt::ArgList
• max_radius : loadPDB.PDBres
• max_size() : ObjexxFCL::Chunk< T > , ObjexxFCL::ChunkVector< typename > , ObjexxFCL::FArray< typename > , utility::keys::ClassKeyMap< K, T, C > , utility::keys::ClassKeyVector< K, T, C > , utility::keys::KeyVector< K, T > , utility::keys::SmallKeyMap< K, T > , utility::keys::SmallKeyVector< K, T >
• max_val() : numeric::Polynomial_1d
• max_val_ : numeric::Polynomial_1d
• max_vals_ : numeric::kdtree::KDPointList
• max_values() : numeric::kdtree::KDPointList
• max_width : app.pyrosetta_toolkit.modules.prettytable.prettytable.PrettyTable
• maxcall : numeric::nls::lm_control_struct
• MaxColsAtCompileTime : numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
• maxE_ : ExposedStrandMover , HDmakerMover
• MaxExpression() : numeric::expression_parser::MaxExpression
• maximum() : numeric::interpolation::Histogram< typename, typename >
• maximum_file_length : binder::Config
• maximum_value() : numeric::xyzVector< typename >
• maxrad() : basic::sampling::orientations::QuaternionGrid
• maxrad_ : basic::sampling::orientations::QuaternionGrid
• maxRMSD_ : ExposedStrandMover
• MaxRowsAtCompileTime : numeric::linear_algebra::GeneralizedEigenSolver< _MatrixType >
• maybe() : Base , Delete
• maybe_base_classes() : binder::ClassBinder
• maybe_copy_constructible() : rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >
• maybe_default_constructible() : rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >
• maybe_has_equal_operator() : rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >
• maybe_has_insertion_operator() : rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >
• mc : app.surface_docking.movers.CentroidRelax , app.surface_docking.movers.FullAtomRelax
• mc_ : zinc1_homodimer_design
• mean_squared_error() : numeric::MultiDimensionalHistogram
• med_radius : loadPDB.PDBres
• Member() : basic::sampling::orientations::Permute
• memberFunction : tools.CppParser.CppFunction
• members_ : utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
• MemoryBuffer() : fmt::internal::MemoryBuffer< T, SIZE, Allocator >
• MemTracer() : basic::MemTracer
• MenBar : app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
• menu_class : app.pyrosetta_toolkit.pyrosetta_toolkit.main_window
• merge() : numeric::kdtree::KDPointList
• merged() : utility::options::OptionCollection
• MessageListenerFactory() : basic::mpi::MessageListenerFactory
• messages_ : utility::SimulateMPIData
• messages_for_node_ : utility::SimulateMPIData
• messages_from_node_ : utility::SimulateMPIData
• meta_begin() : numeric::geometry::hashing::xyzStripeHashWithMeta< T >
• meta_end() : numeric::geometry::hashing::xyzStripeHashWithMeta< T >
• meta_iterator() : numeric::geometry::hashing::xyzStripeHashWithMeta< T >::meta_iterator
• metal_scorefxn_ : zinc1_homodimer_design
• MetaMaxExpression() : numeric::expression_parser::MetaMaxExpression
• MetaMinExpression() : numeric::expression_parser::MetaMinExpression
• method_code_ : PhProtocol
• MetricValue() : basic::MetricValue< T >
• midpoint : numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• min() : numeric::random::RandomGenerator , numeric::sphericalVector< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• min_ : Histogram , numeric::ClusterOptions , numeric::interpolation::Histogram< typename, typename >
• min_cmd : app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
• min_dfp_mover : app.surface_docking.movers.FullAtomRelax
• min_dfp_trial : app.surface_docking.movers.FullAtomRelax
• min_i_ : numeric::ClusterOptions
• min_j_ : numeric::ClusterOptions
• min_lin_mover : app.surface_docking.movers.FullAtomRelax
• min_lin_trial : app.surface_docking.movers.FullAtomRelax
• min_occurs() : utility::tag::XMLSchemaParticle , utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
• min_occurs_ : utility::tag::XMLSchemaParticle
• min_options : app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
• min_or_max_occurs_set : utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
• min_pack : app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignWrapper
• min_protocols : app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
• min_sc : app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignWrapper
• min_seq : app.surface_docking.movers.FullAtomRelax
• min_val() : numeric::Polynomial_1d
• min_val_ : numeric::Polynomial_1d
• MinExpression() : numeric::expression_parser::MinExpression
• minimize() : app.pyrosetta_toolkit.modules.protocols.MinimizationProtocols.MinimizationProtocols
• Minimize() : Minimize
• minimizer : MinimizerBenchmark< sft, TScale >
• MinimizerBenchmark() : MinimizerBenchmark< sft, TScale >
• minimum() : numeric::interpolation::Histogram< typename, typename >
• minimum_value() : numeric::xyzVector< typename >
• minOPTIONS : app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
• mix : app.pyrosetta_toolkit.modules.prettytable.prettytable_test.BuildEquivelanceTest
• mm : MinimizerBenchmark< sft, TScale >
• mod() : numeric::ModSelector< T, bool > , numeric::ModSelector< T, true > , ObjexxFCL::ModSelector< T, bool > , ObjexxFCL::ModSelector< T, true >
• mode : calccontacts.contactProtein
• model_group_ : utility::tag::XMLSchemaComplexType
• modelID : app.pyrosetta_toolkit.modules.SQLPDB.SQLPDB
• module_variable_name() : binder::Context
• modulo() : numeric::ModuloSelector< T, bool > , numeric::ModuloSelector< T, true > , ObjexxFCL::ModuloSelector< T, bool > , ObjexxFCL::ModuloSelector< T, true >
• molecule_type : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ParamsProperties , app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.PatchProperties
• monitoring_list_ : basic::Tracer
• monomer_nres_ : HDdesignMover
• mOptions_ : utility::tag::Tag
• more_ancient_ptr : utility::history_queue_struct
• more_recent_ptr : utility::history_queue_struct
• morph_line_in_pdb_map_to_pdb_line() : app.pyrosetta_toolkit.modules.PythonPDB.PythonPDB
• move_superimpose() : ExposedStrandMover
• move_to_back() : utility::in_place_list< T >
• move_to_front() : utility::in_place_list< T >
• movemap : app.surface_docking.movers.Abinitio , app.surface_docking.movers.CentroidRelax , app.surface_docking.movers.FullAtomRelax , ShearMoverBenchmark , SmallMoverBenchmark
• movemap_ : zinc2_homodimer_design
• movemap_bb_ : zinc2_homodimer_design
• movemap_sc_ : zinc2_homodimer_design
• mover_3mer : app.surface_docking.movers.Abinitio
• mover_9mer : app.surface_docking.movers.Abinitio
• Mp_iter : utility::json_spirit::Multi_pass_iters< Istream_type >
• Mp_iters : utility::json_spirit::Stream_reader< Istream_type, Value_type > , utility::json_spirit::Stream_reader_thrower< Istream_type, Value_type >
• mpi_FileBuf_master_rank_ : utility::io::ozstream
• mpi_nprocs() : utility::SimulateMPI , utility::SimulateMPIData
• mpi_nprocs_ : utility::SimulateMPIData
• mpi_ostreambase_type : utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
• mpi_rank() : utility::SimulateMPI
• mpi_rank_ : basic::Tracer
• MPI_reroute_rank() : utility::io::ozstream
• mpi_stream_p_ : utility::io::ozstream
• mpi_streambuf_type : utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
• msg() : utility::excn::EXCN_Base , utility::excn::EXCN_Msg_Exception
• msg_ : utility::excn::EXCN_Msg_Exception , utility::EXCN_utility_exit
• msg_type() : utility::SimulateMPIMessage
• msg_type_ : utility::SimulateMPIMessage
• MsgQueue : utility::SimulateMPIData
• msr1_ : zinc2_homodimer_design
• msr2_ : zinc2_homodimer_design
• msr_ : zinc1_homodimer_design
• msr_1_ : zinc2_homodimer_setup
• msr_2_ : zinc2_homodimer_setup
• mt19937_RG() : numeric::random::mt19937_RG
• Multi_pass_iters() : utility::json_spirit::Multi_pass_iters< Istream_type >
• MultiDimensionalHistogram() : numeric::MultiDimensionalHistogram
• multiline : yaml.emitter.ScalarAnalysis
• multiplication_dimension() : numeric::MathMatrix< T >
• multiply : numeric::sphericalVector< typename > , numeric::xyzTriple< typename > , numeric::xyzVector< typename >
• MultiplyExpression() : numeric::expression_parser::MultiplyExpression
• mutate() : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
• mutate_button : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
• mutate_to_variant() : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• mutateRes() : app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignProtocols
• mute_level_ : basic::Tracer
• muted : basic::TracerOptions
• muted_ : basic::Tracer
• muted_by_default_ : basic::Tracer
• mutRes() : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• mvTags_ : utility::tag::Tag
• my_rank_ : utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
• myMC() : myMC
• MyScoreMover() : MyScoreMover
• mysql : utility::sql_database::DatabaseMode