- b -

• b : basic::sampling::orientations::Triple
• b_ : ObjexxFCL::byte , ObjexxFCL::ubyte
• b_is_set_ : basic::svd::SVD_Solver
• base : arls_impl.DockingFile
• base_ : utility::file::FileName
• base_path_ : basic::resource_manager::locator::FileSystemResourceLocator
• base_scale_ : InteractionGraphPerformanceBenchmark
• base_scale_factor_ : ScoreEachBenchmark
• base_type_ : utility::tag::XMLSchemaRestriction
• basename : app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.Properties
• bases : tools.CppParser.CppClass
• basic_options : app.pyrosetta_toolkit.window_modules.options_system.OptionSystemManager.OptionSystemManager
• basicOPT : app.pyrosetta_toolkit.window_main.frames.SimpleAnalysisFrame.SimpleAnalysisFrame
• basicOPTIONS : app.pyrosetta_toolkit.window_main.frames.SimpleAnalysisFrame.SimpleAnalysisFrame
• batch_ids_ : basic::mpi::DbMoverMessageListener
• bbAtomList : loadPDB.PDBres
• been_accessed_ : utility::options::Option
• begin_ : utility::json_spirit::Multi_pass_iters< Istream_type >
• begining_of_the_line_ : basic::Tracer
• benchtype_ : FastRelaxPerformanceBenchmark , InteractionGraphPerformanceBenchmark
• best_ddG_ : zinc1_homodimer_design
• best_indent : yaml.emitter.Emitter
• best_line_break : yaml.emitter.Emitter
• best_pose_ : zinc1_homodimer_design
• best_rmsd_values_ : ExposedStrandMover
• best_width : yaml.emitter.Emitter
• beta_length_ : ExposedStrandMover
• Bfac : loadPDB.PDBatom , loadPDB.PDBres
• bgBlack : basic::Tracer
• bgBlue : basic::Tracer
• bgCyan : basic::Tracer
• bgGreen : basic::Tracer
• bgMagenta : basic::Tracer
• bgRed : basic::Tracer
• bgWhite : basic::Tracer
• bgYellow : basic::Tracer
• bin_placement_ : numeric::interpolation::Histogram< typename, typename >
• bin_widths_ : numeric::geometry::hashing::SixDCoordinateBinner
• binded : binder::Context
• binders : binder::Context
• binders_ : binder::Config
• binding_requested_ : binder::Binder
• binding_source_path : BuildBindings.ModuleBuilder
• bits_ : utility::BitSet< B > , utility::BitVector< B >
• Black : basic::Tracer
• black_listed_files_ : utility::Inline_File_Provider
• blocked : utility::signals::LinkUnit
• blocked_ : utility::signals::SignalHub< ResultType, Signal >
• Blue : basic::Tracer
• bMPI_reroute_stream_ : utility::io::ozstream
• body : options.KeepSameFile
• Bold : basic::Tracer
• bool_values : yaml.constructor.SafeConstructor
• boolean_options_ : basic::resource_manager::JobOptions
• boolean_vector_options_ : basic::resource_manager::JobOptions
• boolean_vectors_ : utility::options::OptionCollection
• booleans_ : utility::options::OptionCollection
• border_ : numeric::interpolation::spline::BicubicSpline , numeric::interpolation::spline::CubicSpline , numeric::interpolation::spline::PolycubicSpline , numeric::interpolation::spline::TricubicSpline
• boundary_functions_ : numeric::interpolation::spline::SplineGenerator
• bounding_box_ : numeric::geometry::hashing::SixDCoordinateBinner
• bounds_ : numeric::kdtree::KDTree
• breakdown : app.pyrosetta_toolkit.window_main.menu.Menus
• buf : PyMOLPyRosettaServer.PR_UDPServer
• buf_ : basic::PyTracer
• buffer : SVR_Q , yaml.error.Mark , yaml.reader.Reader
• buffer_ : fmt::BasicArrayWriter< Char > , fmt::BasicMemoryWriter< Char, Allocator > , fmt::BasicWriter< Char > , fmt::FormatInt , fmt::internal::FormatBuf< Char > , utility::signals::BufferedSignalHub< ResultType, Signal >
• buffer_size : boost_adaptbx::python::streambuf
• buffer_size_ : utility::io::ozstream
• buffering_ : utility::signals::BufferedSignalHub< ResultType, Signal >
• build_ala_mover_ : HDdesignMover
• button_backrub_residue : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_backrub_residue_and_neighbors : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_begin : app.pyrosetta_toolkit.modules.protocols.GraftingProtocols.GraftMoverWindow
• button_check_residue : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
• button_clear_resfile : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
• button_ClearRes : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
• button_DelAcc : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• button_Delta : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_dump_pose : app.pyrosetta_toolkit.window_main.frames.OutputFrame.OutputFrame
• button_Edi : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• button_fragment : app.pyrosetta_toolkit.modules.protocols.FloppyTailProtocol.FloppyTailProtocol
• button_full_design : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_Get : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_go : app.pyrosetta_toolkit.modules.protocols.FloppyTailProtocol.FloppyTailProtocol
• button_load_from_pose : app.pyrosetta_toolkit.modules.protocols.GraftingProtocols.GraftMoverWindow
• button_load_resfile : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
• button_next_residue : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow , app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_Out : app.pyrosetta_toolkit.window_main.frames.OutputFrame.OutputFrame
• button_Pack : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_previous_residue : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow , app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_ProtAdd : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• button_ProtRes : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• button_relax_residue : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_relax_residue_and_neighbors : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_relax_residue_and_neighbors_bb : app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
• button_resfile : app.pyrosetta_toolkit.modules.protocols.FloppyTailProtocol.FloppyTailProtocol
• button_save_resfile : app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
• button_Shear : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• button_Sho : app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
• bw : numeric::fourier::SHT , numeric::fourier::SO3coeffs
• by_cover_ : basic::sampling::orientations::QuaternionGridManager
• by_hand_beginning : BuildBindings.ModuleBuilder , BuildPackagedBindings.ModuleBuilder
• by_hand_beginning_file : BuildBindings.ModuleBuilder , BuildPackagedBindings.ModuleBuilder
• by_hand_ending : BuildBindings.ModuleBuilder , BuildPackagedBindings.ModuleBuilder
• by_hand_ending_file : BuildBindings.ModuleBuilder , BuildPackagedBindings.ModuleBuilder
• by_radius_ : basic::sampling::orientations::QuaternionGridManager
• by_size_ : basic::sampling::orientations::QuaternionGridManager