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Rosetta
3.7
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- m -
- M_
: basic::svd::SVD_Solver
- m_
: utility::keys::SmallKeyMap< K, T >
, utility::keys::SmallKeyVector< K, T >
- m_arr
: basic::sampling::orientations::Permute
- m_buf
: utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_istreambase< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >
- m_buffer
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_crc
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_err
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_gzip_crc
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_gzip_data_size
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_input_buffer
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_is_gzip
: zlib_stream::basic_zip_istream< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_istream
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_mpi_stream_finalized
: utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- m_ostream
: zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_output_buffer
: zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_v
: basic::sampling::orientations::QuatSet
- m_w
: basic::sampling::orientations::QuatSet
- m_zip_stream
: zlib_stream::basic_unzip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
, zlib_stream::basic_zip_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- m_zip_stream_finalized
: zlib_stream::basic_zip_ostream< Elem, Tr, ElemA, ByteT, ByteAT >
- Magenta
: basic::Tracer
- main
: app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignProtocols
, app.pyrosetta_toolkit.modules.protocols.FloppyTailProtocol.FloppyTailProtocol
, app.pyrosetta_toolkit.modules.protocols.GraftingProtocols.GraftMoverWindow
, app.pyrosetta_toolkit.window_main.frames.InputFrame.InputFrame
, app.pyrosetta_toolkit.window_main.frames.OutputFrame.OutputFrame
, app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
, app.pyrosetta_toolkit.window_modules.clean_pdb.FixPDBWindow.FixPDBWindow
, app.pyrosetta_toolkit.window_modules.design.ResfileDesignWindow.ResfileDesignWindow
, app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
, app.pyrosetta_toolkit.window_modules.insert_bfactor.InsertBFactor.InsertBFactor
, app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
, app.pyrosetta_toolkit.window_modules.options_system.OptionSystemManager.OptionSystemManager
, app.pyrosetta_toolkit.window_modules.protocol_builder.ProtocolBuilder.MainProtocols
, app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
, app.pyrosetta_toolkit.window_modules.vicinity_options.vicinity_window.vicinityrelaxwindow
- main_chain
: app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
- main_file
: app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.Properties
- main_region
: app.pyrosetta_toolkit.modules.DesignBreakdown.DesignBreakdown
- main_resnum
: app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow
- main_selection
: app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
- main_task_factory_
: CoupledMovesProtocol
- main_type
: app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ParamsProperties
- map_
: basic::datacache::CacheableStringFloatMap
, basic::datacache::CacheableStringMap
, basic::datacache::WriteableCacheableMap
, fmt::BasicFormatter< Char >
, fmt::internal::ArgMap< Char >
- mapping_context
: yaml.emitter.Emitter
- mark
: app.pyrosetta_toolkit.window_modules.interactive_terminal.interactive_terminal.TkConsoleView
, yaml.scanner.SimpleKey
- marks
: yaml.parser.Parser
- master_poses_
: ExposedStrandMover
- master_rank_
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >
- match1_
: zinc2_homodimer_setup
- match2_
: zinc2_homodimer_setup
- max_
: Histogram
- max_angle
: app.surface_docking.movers.CentroidRelax
, app.surface_docking.movers.FullAtomRelax
- max_occurs
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
- max_occurs_
: utility::tag::XMLSchemaParticle
- max_radius
: loadPDB.PDBres
- max_size
: ObjexxFCL::FArray< typename >
- max_val_
: numeric::Polynomial_1d
- max_vals_
: numeric::kdtree::KDPointList
- maxcall
: numeric::nls::lm_control_struct
- maxE_
: ExposedStrandMover
, HDmakerMover
- maximum_file_length
: binder::Config
- maxrad_
: basic::sampling::orientations::QuaternionGrid
- maxRMSD_
: ExposedStrandMover
- mc
: app.surface_docking.movers.CentroidRelax
, app.surface_docking.movers.FullAtomRelax
- mc_
: zinc1_homodimer_design
- med_radius
: loadPDB.PDBres
- memberFunction
: tools.CppParser.CppFunction
- members_
: utility::json_spirit::Json_grammer< Value_type, Iter_type >::definition< ScannerT >
- MenBar
: app.pyrosetta_toolkit.window_modules.scorefunction.ScoreFxnControl.ScoreFxnControl
- menu_class
: app.pyrosetta_toolkit.pyrosetta_toolkit.main_window
- messages_
: utility::SimulateMPIData
- messages_for_node_
: utility::SimulateMPIData
- messages_from_node_
: utility::SimulateMPIData
- metal_scorefxn_
: zinc1_homodimer_design
- method_code_
: PhProtocol
- min_
: Histogram
, numeric::ClusterOptions
, numeric::interpolation::Histogram< typename, typename >
- min_cmd
: app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
- min_dfp_mover
: app.surface_docking.movers.FullAtomRelax
- min_dfp_trial
: app.surface_docking.movers.FullAtomRelax
- min_i_
: numeric::ClusterOptions
- min_j_
: numeric::ClusterOptions
- min_lin_mover
: app.surface_docking.movers.FullAtomRelax
- min_lin_trial
: app.surface_docking.movers.FullAtomRelax
- min_occurs
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
- min_occurs_
: utility::tag::XMLSchemaParticle
- min_options
: app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
- min_or_max_occurs_set
: utility::tag::XMLSchemaSimpleSubelementList::ElementSummary
- min_pack
: app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignWrapper
- min_protocols
: app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
- min_sc
: app.pyrosetta_toolkit.modules.protocols.DesignProtocols.DesignWrapper
- min_seq
: app.surface_docking.movers.FullAtomRelax
- min_val_
: numeric::Polynomial_1d
- minimizer
: MinimizerBenchmark< sft, TScale >
- minOPTIONS
: app.pyrosetta_toolkit.window_main.frames.QuickProtocolsFrame.QuickProtocolsFrame
- mix
: app.pyrosetta_toolkit.modules.prettytable.prettytable_test.BuildEquivelanceTest
- mm
: MinimizerBenchmark< sft, TScale >
- mode
: calccontacts.contactProtein
- model_group_
: utility::tag::XMLSchemaComplexType
- modelID
: app.pyrosetta_toolkit.modules.SQLPDB.SQLPDB
- molecule_type
: app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ParamsProperties
, app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.PatchProperties
- monitoring_list_
: basic::Tracer
- monomer_nres_
: HDdesignMover
- mOptions_
: utility::tag::Tag
- more_ancient_ptr
: utility::history_queue_struct
- more_recent_ptr
: utility::history_queue_struct
- movemap
: app.surface_docking.movers.Abinitio
, app.surface_docking.movers.CentroidRelax
, app.surface_docking.movers.FullAtomRelax
, ShearMoverBenchmark
, SmallMoverBenchmark
- movemap_
: zinc2_homodimer_design
- movemap_bb_
: zinc2_homodimer_design
- movemap_sc_
: zinc2_homodimer_design
- mover_3mer
: app.surface_docking.movers.Abinitio
- mover_9mer
: app.surface_docking.movers.Abinitio
- mpi_FileBuf_master_rank_
: utility::io::ozstream
- mpi_nprocs_
: utility::SimulateMPIData
- mpi_rank_
: basic::Tracer
- mpi_stream_p_
: utility::io::ozstream
- msg_
: utility::excn::EXCN_Msg_Exception
, utility::EXCN_utility_exit
- msg_type_
: utility::SimulateMPIMessage
- msr1_
: zinc2_homodimer_design
- msr2_
: zinc2_homodimer_design
- msr_
: zinc1_homodimer_design
- msr_1_
: zinc2_homodimer_setup
- msr_2_
: zinc2_homodimer_setup
- multiline
: yaml.emitter.ScalarAnalysis
- mutate_button
: app.pyrosetta_toolkit.window_modules.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager.ligand_ncaa_ptm_manager
- mute_level_
: basic::Tracer
- muted
: basic::TracerOptions
- muted_
: basic::Tracer
- muted_by_default_
: basic::Tracer
- mvTags_
: utility::tag::Tag
- my_rank_
: utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >